FFCP PHASE1:Hg19::chr17:38552615..38552637,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2405 | |||
|description=CAGE_peak_at_chr17:38552615..38552637,- | |||
|id=chr17:38552615..38552637,- | |||
|ontology_enrichment_celltype=CL:0000066!7.30e-09!254;CL:0000548!7.52e-07!679;CL:0000004!7.52e-07!679;CL:0000255!7.52e-07!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.39e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.67e-62!235;DOID:14566!1.96e-61!239;DOID:0050687!3.23e-33!143;DOID:0050686!8.18e-27!137;DOID:305!2.07e-23!106;DOID:2531!1.18e-17!51;DOID:0060083!1.18e-17!51;DOID:1240!2.52e-13!39;DOID:8692!7.44e-09!31;DOID:7!6.77e-08!39;DOID:3095!3.71e-07!22;DOID:2994!3.71e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.10e-12;39!DOID:2531;3.34e-12;51!DOID:0060083;3.34e-12;51!DOID:8692;1.20e-09;31!DOID:0050687;2.86e-08;143!DOID:3095;6.83e-08;22!DOID:2994;6.83e-08;22!DOID:305;2.14e-07;106!DOID:162;6.51e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.18e-58,235;DOID:14566,7.60e-57,239;DOID:0050687,7.30e-30,143;DOID:0050686,4.46e-24,137;DOID:305,6.85e-20,106;DOID:2531,1.91e-19,51;DOID:0060083,1.91e-19,51;DOID:1240,3.89e-15,39;DOID:8692,1.50e-09,31;DOID:3095,7.61e-08,22;DOID:2994,7.61e-08,22;DOID:7,7.73e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,4.00730381983479,4.24310717725941,2.63639543149086,4.12632391038937,3.20192298854788,2.83358812729245,0,0,0,0,0.30120591877825,0,3.17615522379237,2.98555388223585,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0,0,0,2.17755243533648,0.650296737799391,2.95988228286617,2.21080014228679,0.869409257205157,0,0,0,1.0197840842781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.01210257911091,0.255725123687061,18.7948359239974,0.50133791063589,1.44846518960824,0,0,1.22895262313288,0.443458794925128,1.93236528524877,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,1.10047216776027,0,0,0,0,0,0,0,1.10298924103761,0,0.982297011124877,0.44905874525234,1.35133776579987,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,0,2.58152958673932,4.965357350777,0,0,0,0,0.67355336034844,0.980771418680752,0,0,0,0.312160076830321,0,0.747243402759005,0.939475989150119,1.61872944368132,0.421352420106746,0,3.4393608847295,0.206651562351531,0,1.23633464639278,0,0,1.34668891163253,1.62654075833553,0,0.877955241761676,0.919463387397059,0.600952235626387,0.567160915800105,10.404598869954,0.213557388818567,0.423863802319124,5.40163972951924,0.618315175430633,1.54584324027377,0.18611685633159,4.38818463827292,0.876933046450788,5.80597680761463,0.0920498986422993,0,3.90510551768276,0.806016785821122,1.3564847384839,0,0,0,4.39105342066543,2.91565490307268,4.4153698290417,3.52447587052259,3.28017106138317,6.56959246336494,0,0,0,0,0,2.72105640091641,0.842923450390509,2.6511213287183,2.75734931830985,1.96091499683166,1.89816495288877,2.83145747136345,1.56977172100277,3.07797725557112,0,0,0,0,0,0.982827216677626,0,4.41463099414651,0.860919069801795,0.686271241194102,0,0,3.11639814476056,0.740707561268237,0.325808305310325,0,0,0.927443239800615,0.234817388471643,0.144366447761074,0,0.951270761172991,2.37061319387782,0,0,0,0.594524649154913,0,0,0.141775097242386,3.58234090811393,6.1033127087932,0.766765358330422,0.985326475791887,0.704387472105808,0,0,0,0.952468414382536,0,1.17217447210047,0,0.514137463516618,2.10240140490742,0,0.448524337381443,0,1.3200891447771,0,0,4.22651376278,0,0,0.257207374262142,0,0,1.00084595560703,0,0,1.62868092146868,0.355391948742546,3.16780749173372,0,0,1.3996218765488,0,0,0,0.479249710983165,0,0,0.868687840005475,1.2328579353023,0.358121926479791,9.8634926714304,0.197030760201927,0,0,2.54094624222463,0,3.86644406388848,0.335032530668698,2.55175500661265,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0,0.207970861530807,1.07057393278297,0.315404830067869,0.819989904948992,0,0,0,3.98535359121262,0,0.868836144680828,0,0,0,0,0,0,1.66435439510497,0,0,0.460385919864187,0.280660094433074,0,0.511707249066704,0,0,4.62629081407967,0.177561725313127,3.03870477251094,1.55776328755086,0.929683027679674,1.20859449591622,0,0.0920809889358963,1.49258782613989,6.3731908802351,0,0,1.07821471946181,0,0,0.316654886678627,0,0,3.88648648983851,0,0.270946437543853,0,0.764628819135115,0,0.223874754722178,1.75407901316748,1.0457418040996,1.53870075069834,0.328014645699706,0.650756789328606,0,4.48690377609883,0.742585499285292,0,0,1.6068392984416,0,0.924291702687866,1.5350367472613,0.827019434907183,0.966782203814463,1.59518363305651,1.36362603865761,0.445160178233687,0,0.192190067365106,1.27612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,1.2655176988749,0,0,0,0.318203247925937,0,0.539617372749944,0.274537029736055,1.06031162111118,0,0,0,0,0.243713489631284,0,1.63799893689583,0.707027159768564,0,0,0,0,0,0,0,0,0.563391205064483,1.14729081763241,0,0,0.354761064070598,0.844430541190656,1.64647446479951,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,0,0,0.79312517629427,2.56377770705936,0,4.16568367167754,9.29015875628594,3.89526875036401,5.69134746787313,9.56557636372934,5.9873811429845,0.957526850661834,2.54008299268659,4.22008522356922,4.7735520279288,2.73881614839831,5.17043656050977,0,5.0787533340481,7.06587530456278,11.7043830170808,0.425846237690326,5.15258017133647,3.07240764308458,1.3420566473545,2.50273712567863,4.68931428964897,1.11362469558097,0,0.270455678475983,1.6653598399891,0,0.18714054040822,0,1.09224469574562,3.00897137549192,4.54617834890261,0,0,0,0,0,0.333926115068718,4.12009685566899,2.74463030566391,0,1.10513566212459,2.01546198283421,0.818149460017238,1.47701766553283,0,1.61763032065188,0.358042349351218,2.55786185113436,0,0,0,0,0,0,1.82299432759663,0.0874599999961957,0,3.41380344856499,5.33932665614809,7.56440581657396,6.20538071834636,14.871835282546,6.42412481253181,0,0,0,0,0,0,1.30726156222788,0.697118721393016,0.0769502585037971,0.683652335082007,0.69169171316418,1.88491053260521,3.04212641381623,0,0.641183153813036,0,13.2851287654457,2.19772358953035,1.66211681900156,3.38393490925771,3.92125068635479,2.3495022176618,5.31310451627718,0.953619473882272,6.75193806489686,0.816164040795739,1.69623685720729,1.29833183845255,0,0.0884575645033392,0.611030144933625,0.889563386041866,1.72989514525104,1.04421949505455,0,0.802577647298789,0,10.0350134068616,1.56531695145672,2.18502341580683,0,1.20990716048664,0,0.063186579628488,1.50323419414493,2.69589297632843,0,0.992975867626496,0.627865836814451,0,0.284609546029793,1.8027707491708,2.2562765983567,2.15583274311631,2.43765778425127,0,3.95567874684718,7.54699384054864,4.67771629351588,4.92692742319255,0,0,0,2.32971271899477,4.76915068087175,0,12.5152884950274,0.480952921509202,0,6.39390750662817,1.15272333723285,1.83258553865465,3.08870996151536,0.432164393964449,0.248505071130865,1.17847017308398,1.63085047288337,1.77824838730966,4.79391622890712,0,0,0,0,2.57859264851974,4.46908502274835,0,0,0,2.99518500748487,0,0,0.268733889946905,0,3.49487848582361,5.987521855349,5.10978321963232,5.52709059604316,0.590564889088493,2.2015066337104,0,0,4.34033500855552,3.85110422472255,4.15440338029185,0,0,0,2.68347750079413,0,0,0.211200673038813,0.717149357331379,1.34340638123612,0,0,1.77987976358325,0,0,1.30634944043764,1.19730191562487,2.54486814322951,0.681552087141687,1.81299346432201,0,0,0,0,0.513260513652988,0,0,0,0,0,0.395223263795889,3.53198535304598,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0.110929051536852,0,14.1115607634955,2.62458856720424,0.606596470166591,1.42732666772484,0.470531639396343,9.83503302194451,5.50699908721136,2.23882204330311,0.934853239388898,2.21922344601045,0.189403005275089,0.251567901752575,0.889811221596536,0,0.151230923763239,0.932623203496683,2.36568239983414,0.955780602982214,0,1.08684069813382,2.07353103920428,0.797525143673985,0,0.450772826991655,0,4.47557806525128,0.909243296012797,0.429642228169954,0,1.19428766609585,8.40058305792623,0.343395705182793,0.336749488765919,0,0.192619830407303,2.78774068787403,1.82696004375648,3.85400073370863,2.54674721756217,9.0552580667393,5.01448755028165,0.617602894321944,3.50854479325931,5.12398523243055,4.62993691850196,3.7167336943676,2.04993214870357,3.79973375904318,1.82315973706429,0,0,0,0,4.25892803500336,3.44082072255207,1.26787274015176,0.79994958341972,2.77398497204766,0.516644938982447,2.27006381426734,3.68211900503681,0,0,1.27894371303652,2.69562028491704,3.14531883711793,5.02364335683264,4.41304577880466,3.18862380152524,2.85052257795705,1.11728983594649,0.318004350653419,7.57072752012032,0.80057074828547,0.705351887381368,1.2249819094128,0,0,0,0,1.00828678488687,0,0,0,0.294443155503077,1.06172751012966,2.01771458373847,3.11919298605913,2.288292572803,0,0.397832444232549,0,2.21875575573872,0,3.14288033377707,6.87842053542406,0.295712172434091,0,0,0,0,1.64092442705466,0,0.496211178389294,1.23109871051734,1.02209942111676,0,0,0,0,0,2.53514772622714,1.37190407549935,0,0,8.62815038452968,3.78186766433035,0,0,1.40136081656895,1.82631744101899,0.863710364874486,4.29976519098345,0,8.37472142183451,2.78979420883501,3.47716544605159,0.801711364730253,1.24329698497822,1.0243108625637,0,0,1.06498800657509,0.255640214277473,0,1.3746412112643,0.62041277132864,1.91107787795487,0.782988022584546,1.57040373784389,2.92603019957447,0,0,0,0,3.04121302500737,12.9318003854889,2.02164154321867,1.92008339466232,14.9519102773784,1.81155412280008,0.154348316215889,2.18559560503957,0.470317296361523,0,0,0,0,0.8453114551668,1.18948980281472,0.0939839179798536,0,1.99882311849858,1.07132363163395,0,0.240724100067505,0.730336388246517,0,0,8.83520748281834,0,0.436350690340377,2.1161073620616,3.71995018166751,0.462175628631418,1.29787968637137,3.28032704571205,2.513108155165,2.53397002022874,1.63182127587171,2.13773924212448,1.37842349302267,12.2846694253264,0.757786982182394,2.14371304124943,0,0,0.213233981900981,1.90451545170992,1.48554492622814,0.434523000071005,2.80329656451534,0,0.606351566874658,0.435433495793923,0.684466602170562,0,0,1.33064142618405,0.89543595472072,4.05563914335319,3.8614456457388,0,2.34640942403454,0,1.22068853494722,0,0.201273793591026,1.60284246151616 | |||
|short_description=p@chr17:38552615..38552637,- | |||
}} |
Revision as of 15:09, 20 January 2014
Short description: | p@chr17:38552615..38552637, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38552615..38552637, - |
Coexpression cluster: | C2405_small_Chondrocyte_gall_medulloblastoma_diffuse_mesenchymal_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.39e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.18e-58 | 235 |
disease of cellular proliferation | 7.60e-57 | 239 |
cell type cancer | 7.30e-30 | 143 |
organ system cancer | 4.46e-24 | 137 |
carcinoma | 6.85e-20 | 106 |
hematologic cancer | 1.91e-19 | 51 |
immune system cancer | 1.91e-19 | 51 |
leukemia | 3.89e-15 | 39 |
myeloid leukemia | 1.50e-09 | 31 |
germ cell and embryonal cancer | 7.61e-08 | 22 |
germ cell cancer | 7.61e-08 | 22 |
disease of anatomical entity | 7.73e-07 | 39 |