FFCP PHASE1:Hg19::chr17:48261658..48261673,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48261658..48261673,- | |||
|id=chr17:48261658..48261673,- | |||
|ontology_enrichment_celltype=CL:0000055!5.67e-31!180;CL:0000057!1.86e-24!75;CL:0000048!1.67e-11!430;CL:0000723!9.43e-11!436;CL:0000034!2.27e-10!444;CL:0002334!2.69e-10!12;CL:0002620!1.46e-09!23;CL:0000183!3.10e-09!59;CL:0000680!7.11e-09!57;CL:0000056!7.11e-09!57;CL:0000355!7.11e-09!57;CL:0000187!1.46e-08!54;CL:0000393!8.71e-08!60;CL:0000211!8.71e-08!60;CL:0000499!4.38e-07!27;CL:0002320!9.67e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.40e-11;12!CL:0000057;5.66e-09;73!CL:0000499;5.67e-09;28!CL:0000327;1.81e-08;15!CL:0000153;2.11e-07;9!CL:0000447;2.11e-07;9!CL:0002320;3.74e-07;188!CL:0000134;4.29e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.59e-22,76;CL:0002334,1.37e-11,12;CL:0002320,8.82e-11,361;CL:0000048,1.84e-10,427;CL:0000723,5.66e-10,433;CL:0000134,7.02e-10,354;CL:0000034,2.38e-09,441;CL:0000219,6.28e-09,386;CL:0000499,6.39e-09,28;CL:0000327,2.08e-08,15;CL:0000153,2.38e-07,9;CL:0000447,2.38e-07,9;CL:0000136,2.70e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.61e-07;5!DOID:450;5.61e-07;5!DOID:66;5.61e-07;5!DOID:423;5.61e-07;5!DOID:0080000;5.61e-07;5!DOID:11722;5.61e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.41e-07,5;DOID:450,5.41e-07,5;DOID:66,5.41e-07,5;DOID:423,5.41e-07,5;DOID:0080000,5.41e-07,5;DOID:11722,5.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.74e-11!83;UBERON:0002329!8.74e-11!83;UBERON:0003077!8.74e-11!83;UBERON:0003059!8.74e-11!83;UBERON:0007282!8.74e-11!83;UBERON:0009618!8.74e-11!83;UBERON:0007285!8.74e-11!83;UBERON:0004290!4.99e-10!70;UBERON:0001134!6.94e-10!61;UBERON:0002036!6.94e-10!61;UBERON:0003082!6.94e-10!61;UBERON:0002385!8.94e-10!63;UBERON:0001015!8.94e-10!63;UBERON:0000383!8.94e-10!63;UBERON:0000486!5.48e-08!82;UBERON:0002384!2.14e-07!375;UBERON:0005256!7.53e-07!143;UBERON:0003688!8.61e-07!6;UBERON:0002358!8.61e-07!6;UBERON:0003684!8.61e-07!6;UBERON:0001178!8.61e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.87e-10;9!UBERON:0000042;1.87e-10;9!UBERON:0003688;4.40e-10;6!UBERON:0002358;4.40e-10;6!UBERON:0003684;4.40e-10;6!UBERON:0001178;4.40e-10;6!UBERON:0002384;1.06e-07;198!UBERON:0001013;3.65e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.80e-11,371;UBERON:0003688,5.65e-10,6;UBERON:0002358,5.65e-10,6;UBERON:0003684,5.65e-10,6;UBERON:0001178,5.65e-10,6;UBERON:0004457,2.99e-07,12;UBERON:0000042,2.99e-07,12;UBERON:0001013,3.31e-07,14 | |||
|phase1_expression=4.90531624030503,5.1384125733836,4.65149533516705,4.00293193412522,26.37070457121,1.74467704820074,12.6649939084155,0,0,0.245733936501509,0,0.655324116390517,1.31883489114227,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.861847406537515,2.04000691244253,1.88072832886853,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,4.3372698286148,5.0133791063589,2.462390822334,4.7717156823066,3.40644409211845,0.189069634328136,0.443458794925128,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4303548889923,2.15271869829786,0.662045904066094,13.7681577959431,2.12801029319014,1.68203280042692,5.33744978648525,10.6067045819379,0,1.0776853765575,0.326923806226917,0.756787138224657,2.30470369792,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.280901613404497,0.408308342509787,0.491337269247072,0,7.12801714369232,6.18167323196392,0,6.46756327634615,0.168336113954066,0,0,0.877955241761676,3.0648779579902,3.45547535485173,0.340296549480063,5.56107870635472,1.2813443329114,1.69545520927649,5.40163972951924,1.54578793857658,2.83404594050192,1.48893485065272,1.35021065793013,0.876933046450788,4.54380793639406,1.84099797284599,0.969876340912871,6.74518225781567,0.604512589365842,1.3564847384839,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,4.115740113314,11.7606969108434,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.448524337381443,0.43596006883328,0,3.10252117818667,0,3.381211010224,2.6593811658487,6.24044621468197,0,1.41849132023278,0.532844358032199,1.85871391755592,7.5967024754802,0.823240336780769,0.325736184293735,1.06617584622764,0.791951872933429,0.301439377059586,0,0,0,0,0,2.63587341040741,21.8237678084816,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,1.00034104211935,0,13.9340477225641,11.062597305424,7.09660867652706,2.57711112983969,2.10662269809403,2.27407504055985,0,0,0.368738337083406,0.695068915744663,2.74121620447837,15.7845974952994,0,0,0,0.909382714338778,6.65741758041988,1.81434175997808,8.68377327365719,2.60885354589706,12.6297042494883,9.61043619417757,2.04682899626681,14.3159989817811,1.48418066444991,0.771048469013278,4.97172830876756,0.657017248110473,3.11552657510173,2.44041794765914,0,0,0,2.06666006696292,0.728364672026868,1.70461739447251,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.082509499920588,0,0,8.03419649220798,0.870036464629098,0.154048617114644,0.614014698904518,0.413509717453592,1.82614416276065,0.725083469571143,0.255679882248303,4.09547363974992,0.165284915360978,0,0,0,2.32422774648643,17.6294914225158,0.6970372701606,0.616067160352178,0,0,0,0.286249773483982,0.372158369359667,0.949138274156178,2.2875623270859,0.511795582622668,0,0,0,1.07923474549989,4.11805544604082,0.471249609382746,1.01091240786658,0,0,0,0.974853958525138,0,2.45699840534374,7.21167702963935,0,2.75682671773062,1.32687795048244,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0.563391205064483,0.286822704408103,0.687743287091848,1.78335525740625,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79935628895627,0,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,1.30815439456455,0.113942055847001,0,0,0,0,2.01514705484097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4335094148843,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,4.29363407483012,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.201550417460179,3.24269895188163,0,0,0,0,0,0.0846733320657845,0,0,0,0.275078873194468,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0.326587360109409,0,0,2.21504428321048,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.22391810104059,4.20683957725004,1.66441758450784,0.568209015825267,1.50940741051545,0.889811221596536,0,1.81477108515887,3.26418121223839,0.443565449968902,0.159296767163702,0,0.776314784381297,0.414706207840855,1.86089200190596,2.60872530905867,9.61648697582198,0.761610424337591,0.406870733204662,1.09109195521536,1.93339002676479,0,2.3885753321917,0.400027764663154,5.15093557774189,3.36749488765919,1.26184898228651,0,0,0,0.906823702049089,0.694567422971502,0,0,0,0.657852148736121,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0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| |||
|short_description=p@chr17:48261658..48261673,- | |||
}} |
Revision as of 16:10, 20 January 2014
Short description: | p@chr17:48261658..48261673, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261658..48261673, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.59e-22 | 76 |
preadipocyte | 1.37e-11 | 12 |
connective tissue cell | 8.82e-11 | 361 |
multi fate stem cell | 1.84e-10 | 427 |
somatic stem cell | 5.66e-10 | 433 |
mesenchymal cell | 7.02e-10 | 354 |
stem cell | 2.38e-09 | 441 |
motile cell | 6.28e-09 | 386 |
stromal cell | 6.39e-09 | 28 |
extracellular matrix secreting cell | 2.08e-08 | 15 |
GAG secreting cell | 2.38e-07 | 9 |
carbohydrate secreting cell | 2.38e-07 | 9 |
fat cell | 2.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.80e-11 | 371 |
omentum | 5.65e-10 | 6 |
peritoneum | 5.65e-10 | 6 |
abdominal cavity | 5.65e-10 | 6 |
visceral peritoneum | 5.65e-10 | 6 |
cavity lining | 2.99e-07 | 12 |
serous membrane | 2.99e-07 | 12 |
adipose tissue | 3.31e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.41e-07 | 5 |
myotonic disease | 5.41e-07 | 5 |
muscle tissue disease | 5.41e-07 | 5 |
myopathy | 5.41e-07 | 5 |
muscular disease | 5.41e-07 | 5 |
myotonic dystrophy | 5.41e-07 | 5 |