FFCP PHASE1:Hg19::chr17:76851179..76851237,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11821 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-309bp_to_AL110197_5end | |||
|coexpression_cluster_id=C1793 | |||
|description=CAGE_peak_2_at_TIMP2_5end | |||
|id=chr17:76851179..76851237,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-20!180;CL:0000057!8.06e-14!75;CL:0000222!7.35e-11!119;CL:0000183!4.31e-08!59;CL:0000192!4.96e-07!42;CL:0000514!4.96e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.90e-07;12!CL:0000134;9.09e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-13,76;CL:0000222,3.25e-08,121;CL:0000192,3.97e-07,43;CL:0000514,3.97e-07,43;CL:0002334,5.66e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.62e-14!659;UBERON:0000467!1.71e-12!625;UBERON:0000480!3.19e-12!626;UBERON:0004872!2.50e-09!84;UBERON:0005256!7.68e-09!143;UBERON:0000475!1.87e-08!365;UBERON:0002049!2.48e-08!79;UBERON:0007798!2.48e-08!79;UBERON:0003914!4.08e-08!118;UBERON:0000923!6.02e-08!604;UBERON:0005291!6.02e-08!604;UBERON:0006598!6.02e-08!604;UBERON:0002532!6.02e-08!604;UBERON:0002050!6.11e-08!605;UBERON:0005423!6.11e-08!605;UBERON:0000477!6.66e-08!286;UBERON:0000055!7.82e-08!69;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448;UBERON:0001981!1.76e-07!60;UBERON:0007500!1.76e-07!60;UBERON:0004537!1.76e-07!60;UBERON:0006965!1.76e-07!60;UBERON:0000922!1.88e-07!612;UBERON:0004111!3.04e-07!241;UBERON:0000062!3.27e-07!511;UBERON:0004290!4.15e-07!70;UBERON:0000914!4.21e-07!83;UBERON:0002329!4.21e-07!83;UBERON:0003077!4.21e-07!83;UBERON:0003059!4.21e-07!83;UBERON:0007282!4.21e-07!83;UBERON:0009618!4.21e-07!83;UBERON:0007285!4.21e-07!83;UBERON:0002100!4.93e-07!216;UBERON:0000119!7.30e-07!312;UBERON:0000483!8.17e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.55e-07;9!UBERON:0000042;6.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.45e-09,315;UBERON:0004120,1.45e-09,315;UBERON:0006603,1.45e-09,315;UBERON:0005256,1.35e-07,122;UBERON:0004872,3.16e-07,83;UBERON:0004923,5.27e-07,66;UBERON:0002199,7.23e-07,46;UBERON:0002416,7.23e-07,46;UBERON:0007503,8.21e-07,78 | |||
|phase1_expression=12.5358081696684,15.6293382440418,17.7602549160924,14.0102617694383,17.4314826826642,13.0850778615055,20.2639902534648,27.7956744307806,24.5514490507848,0.737201809504527,0.697801167972428,1.31064823278103,1.58260186937072,3.34169152992126,0.994192127183747,2.01697543935533,3.61616716814386,2.19093027116212,1.46379839637152,1.96993692922861,3.26401105990805,1.56727360739044,0.572471974262113,0.821246550437305,1.00434111675842,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,4.70222495903841,2.91504299417082,4.12120908214698,2.90796477559129,1.88937971844405,1.21292030593908,0.232429036905685,0.411167888021826,0.929119112685311,0.863077176966451,1.0246428261164,0,2.41321976515633,0.645484683583826,1.35426486594342,2.25890807451126,3.0019676506363,1.57306439111559,2.14258724659632,2.24650318953266,2.55734850319616,0.659702600373432,1.19678194572979,1.27867425159808,0,0,1.24564449799115,1.25624332628372,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,0.845021145247767,0.212604299965044,0.419317291016752,0.898629049171961,1.05123824989054,1.28580469357664,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0.767175371061182,2.53007406669196,3.00802746381534,4.77993512570718,1.5905718941022,2.91980922181582,0.661743720148475,1.33037638477538,0.527008714158756,2.0956652079634,0,0,0,0.696518949197069,2.12732736830184,0,0,0,0.596287222100115,1.72046919021225,0,1.13061588384802,2.93649605346934,0.275118041940067,0.835979866147242,1.03366703667732,1.42306505074684,1.67360306382335,2.81980521976403,2.28081631715554,6.83373761134875,0.735326160691737,0.81014194788176,0.982297011124877,0.673588117878509,0.450445921933289,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,3.97577561356255,6.20489507156441,0.926864265692532,20.6522366939146,2.83734705758686,1.68203280042692,3.20246987189115,5.42668606517752,2.17847724779836,2.2900814251847,1.9615428373615,4.69208025699287,0.576175924479999,0.937285727335186,6.86752169026705,1.71141546463335,7.02408798593465,0.939475989150119,1.13311061057692,0.561803226808994,1.02077085627447,1.96534907698829,3.71972812232756,19.0080457165129,15.083282685992,5.46096817162816,7.18618141816238,1.0100166837244,1.25118519871964,2.49357703935765,1.31693286264251,3.67785354958824,9.6152357700222,0.794025282120147,2.33206526395521,5.76604949810132,3.17897851739343,3.60109315301283,4.32820622801443,2.31876486041066,5.21127197728451,3.20675031258406,6.52827934580031,0.757301322732344,4.23429533754577,9.5371173523099,6.03516307278244,5.03760491138201,2.88253006927829,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.518305275076852,0,0,4.69348596989448,6.43240938192885,1.38134921352481,6.96551892047969,5.0531563716871,0.709840800239063,0.505754070234305,0.482022059766964,0.55146986366197,0.217879444092406,0.474541238222193,0.269662616320329,0.588664395376038,0,11.8104872739944,5.60967095213783,1.6462960453256,2.94017422771084,0,0,5.31710916013264,0,1.22988438543114,0.686271241194102,0.109750285408626,0,0.100528972411631,0,2.6064664424826,1.03993478527958,0,0.463721619900307,0,2.45422961193825,0.925971025153221,2.47330397904978,0,0,1.96973604869918,0.936017060556951,1.0404181360211,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0.829312462163088,1.58531948758658,0.6312121671319,3.93686944611448,20.2453865545887,24.6156639141099,15.3965201420435,7.19792448923265,7.20823338825402,10.2897515747008,2.46688385559794,0.43596006883328,1.1734125731352,2.97324946242889,0,1.690605505112,19.1475443941107,10.4007436911366,0.514414748524284,0,1.3321108950805,2.57360388584666,1.62786481617433,2.46972101034231,0.65147236858747,2.13235169245527,0,5.12446941001296,1.74306691720059,10.3971910829339,3.64871341923571,2.00902836572851,4.21667878966063,1.91699884393266,6.89171615004683,0,1.73737568001095,1.64381058040307,0.179060963239896,0,0,0,0,8.38512259934129,2.60279707715243,0,0.670065061337395,2.55175500661265,2.99602809578873,14.9580729602012,3.72973962092432,3.55805325985506,2.00068208423871,1.35632511849868,5.61521326133179,6.78030157429215,5.20417969611984,1.63997980989798,8.12554469264841,45.481500811197,30.0071906748264,0.664225598535437,0.737476674166813,11.9899387965954,14.4892856522428,5.49029478097369,0.206768026122887,0.215714200818617,0.640365346820666,1.81876542867756,0,1.5119514666484,21.8334870880524,1.99500565274481,8.70046292742528,24.2182992093275,19.9565827136014,14.4768529029247,10.3892646511494,2.31314540703983,4.08391968220192,3.12083192852475,8.82732529612156,2.90525946149898,2.53804844142407,1.80455823272956,0.276242966807689,2.06666006696292,4.00600569614778,11.6700729313887,0.451199612907412,1.00119938235739,1.56869953835371,0,0.844413031143006,2.27466768141793,2.72149928442425,0.647747748306418,9.25363516141736,2.70946437543853,8.02703638167765,0.509752546090077,0.831076008928724,1.34324852833307,0,0,1.02580050046556,4.26419039409617,7.80908147194327,6.80070676874967,1.92295876118521,1.07262349896764,1.72279661398852,1.95018073810956,8.03419649220798,10.4404375755492,0.616194468458578,0.460511024178389,0.275673144969061,2.68550612170684,2.46528379654188,0.852266274161009,4.5406338179836,0,0,0,0,2.78907329578371,13.2221185668869,2.0911118104818,4.00443654228915,2.12922412126809,1.73986598415015,6.30102344953328,0.286249773483982,0.744316738719335,2.53103539774981,2.09693213316207,4.09436466098134,3.85145089230528,2.54562598340749,5.49464048139461,1.61885211824983,1.37268514868027,1.41374882814824,3.63928466831969,1.58510321173008,3.37006764991185,0,6.33655073041339,7.39551027297288,6.55199574758332,7.49448789354678,3.39024349860728,2.75682671773062,5.97095077717098,10.0843703608365,7.52408194546694,7.21484227251296,3.04365565444056,1.239293992399,1.97186921772569,0.573645408816206,0.687743287091848,3.21003946333125,0.709522128141196,8.2331977766089,12.1839110395164,1.51789269506286,3.84928192269481,0,0.670302275535787,0,6.21349085126742,0,1.68471475667626,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,13.4787524930142,0.121360521749513,0,1.13654458722565,3.34242278632766,6.23625829748541,1.84296421259539,0.994147647766298,2.2507106625682,3.89580467580171,0,0,5.97743964753209,1.93398740871803,0,0.511343412510774,0,3.42143546427988,0.449341755736634,0.358042349351218,0.511572370226872,3.94573622547734,9.57932369387759,0,0.969332746095218,1.94813006139888,3.99227596002388,0,0,7.97499532978273,0.227586896570999,0.508507300585533,0.236387681767936,0,0.291604613383254,0.520874984799877,2.65722415744152,0.241192877250816,0,1.10579259931225,0,1.75508317723178,0.544692317594951,0.139423744278603,7.54112533337211,1.93701494939902,1.1528195219403,1.07709173291727,0.217294743844016,8.61303131276183,13.9228341970831,16.5240780565777,0,0,0,0,0,0,0,0,0.421996129056054,2.44849212238722,0.282706142867882,0.216388639742091,0,1.06149077404007,4.27721101453538,0,0,0,1.41542379259422,0.802577647298789,5.85661114313348,0,0,2.18502341580683,2.36750641709634,0,4.28501866282686,4.17031425548021,0,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,1.24807205711825,2.60339607502696,0.195984794828755,0.435296032902013,18.8704801701393,1.0319161948297,0.387025325156341,0.146178634172371,0.246346371159628,2.23074737923365,3.44198894096851,2.03382666702479,0.959293472527256,0.993573058514948,0.633107959558787,0.391102765469606,0.881747022766871,7.89776080535604,1.39866726707491,0,0,0,0.14405479798815,1.61528296235062,0.235694034616795,0.951329442515298,1.35983700206033,0.611989305817931,2.88950589901519,0,1.09524303113594,0,1.71906176567983,0,3.6306712165393,5.27068975226872,2.15361907373044,1.59743200399193,2.14613024068285,0.223171457441873,0.739018197353989,5.04419836959365,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.196854963029498,0,2.38568906942791,1.90684768556206,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.668245123238271,0,0.630445658393585,0.996637174564964,2.11200673038813,0.537862017998534,0,3.57347663186684,1.32418394073086,0.5085370753095,20.6339848666411,4.32110745600634,8.16468400273523,2.39460383124975,0,1.87426823963964,0.453248366080503,3.07759690723973,1.32506888912221,0.646414781807753,1.19009341568421,0.171086837884329,0.704815022316672,5.12579580324934,3.30129040709298,12.8414107157631,2.48083010905975,0,0,0,0,1.2534494701135,0.612691153526923,0.983617892129413,0,0.886068179966986,1.22026264901963,1.001527445652,0.573409195690071,2.5513681853476,0.931446044120752,0,0.37494122388632,12.7385258734984,17.127920012698,1.88212655758537,0,0.434763085832475,1.49254802886874,2.80455971816669,2.77402930751307,5.87149316352776,2.0125432140206,4.44905610798268,5.49216164152617,6.50292972181928,3.26418121223839,2.36568239983414,2.23015474029183,8.09645601894488,1.70789252563885,3.7323558705677,1.59505028734797,7.30443086536427,4.20721305192212,6.09288339470073,2.44122439922797,3.45512452484863,2.90008504014719,2.32016879939247,5.97143833047924,1.20008329398946,5.49433128292469,2.35724642136143,0,0.963099152036517,1.07220795687463,0.521988583930423,2.493765180635,3.00979216620984,3.18157715858408,6.98446480217801,2.16161013012681,7.23637363609733,9.54121388107758,3.27953865060555,4.22356101632682,0.512483037175893,3.10887307558079,4.55789934266073,0.829550616910385,0,0,0,4.25892803500336,0.983091635014877,0.211312123358627,0,0,0,0,2.02516545277025,0,0,1.15104934173287,0.431299245586727,0.157265941855896,0.54604819096007,0.33946505990805,0.425149840203366,0.247871528518004,0.558644917973244,2.54403480522735,0.0788617450012534,0,1.76337971845342,2.4499638188256,0.578063025868136,0,0.319267718114302,3.69209455633359,3.02486035466062,0.553258019713743,1.13032951942296,4.28308260777463,0.687034029507179,0,0,0.231051332300676,1.1441462864015,0,0.994581110581374,12.4849145059767,0.60511520611056,0,2.88097363929565,3.93052602024232,2.06998520703863,0.405225507710368,0,1.03343398250592,0.253663240775627,3.82882366312754,0,10.4204347461752,0.175871244359621,1.02209942111676,0,0.672567444437648,3.64179362541979,1.36597314810779,5.58824932024625,0,1.02892805662451,1.22345519358297,0.460409414939944,0.827356886187777,0.333694205676207,4.63109247818033,0.628462359664008,0.280272163313789,1.82631744101899,0,0,1.78691360441641,0.158013611732727,0,0,0.801711364730253,1.86494547746733,1.53646629384555,0,0.430227358820278,1.30165200803622,1.78948149994231,7.62096690343672,0.9164274741762,0.62041277132864,0,1.00669888618013,0.490751168076215,0.243835849964539,0,1.33461648913121,3.4794432940146,6.31424290976881,0,1.19370465096821,0.475680363110274,0.33883824611688,0.109940516745429,0.603851374266694,2.46957305945423,1.09279780251979,0.470317296361523,2.45148321753905,0,5.30032861210352,2.97046400327086,1.6906229103336,3.56846940844415,2.25561403151649,1.16024198352439,0,0.178553938605658,0,0.0802413666891683,0,0,1.86341458096887,1.10440093535229,1.29183831362738,3.9271562130634,3.1741610430924,5.95192029066802,6.93263442947127,7.35465155610441,0,0.218531143927391,0.506794004045748,0.203977659483963,0,0.18378979906969,0.250707539292375,16.140862720485,3.21556956187414,2.48750831837634,1.86179392551411,3.41174371041569,0.952257725854961,2.84191203278427,0.744896571550295,0.448527450322454,1.52753179867596,0.808468755832877,5.22520194952707,3.42233301085281,0.134704106029175,2.36683277795832,4.32458463509817,0.244209805832924,4.1623664892309,0,1.61685363791856,2.34640942403454,4.40069199058319,0.813792356631477,1.99727032255654,8.4534993308231,0 | |||
|short_description=p2@TIMP2 | |||
}} |
Revision as of 17:45, 20 January 2014
Short description: | p2@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIMP2_5end |
Coexpression cluster: | C1793_Osteoblast_Melanocyte_Preadipocyte_Adipocyte_Mesenchymal_Fibroblast_chorionic |
Association with transcript: | -309bp_to_AL110197_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-13 | 76 |
mesodermal cell | 3.25e-08 | 121 |
smooth muscle cell | 3.97e-07 | 43 |
smooth muscle myoblast | 3.97e-07 | 43 |
preadipocyte | 5.66e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.45e-09 | 315 |
mesoderm-derived structure | 1.45e-09 | 315 |
presumptive mesoderm | 1.45e-09 | 315 |
trunk mesenchyme | 1.35e-07 | 122 |
splanchnic layer of lateral plate mesoderm | 3.16e-07 | 83 |
organ component layer | 5.27e-07 | 66 |
integument | 7.23e-07 | 46 |
integumental system | 7.23e-07 | 46 |
epithelial vesicle | 8.21e-07 | 78 |