FFCP PHASE1:Hg19::chr18:12012068..12012098,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_at_chr18:12012068..12012098,+ | |||
|id=chr18:12012068..12012098,+ | |||
|ontology_enrichment_celltype=CL:0002602!2.22e-12!2;CL:0000153!1.40e-10!9;CL:0000447!1.40e-10!9;CL:0000667!2.07e-09!6;CL:0000058!2.07e-09!6;CL:0000138!2.07e-09!6;CL:0000327!8.06e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002602;5.15e-21;2!CL:0002564;1.71e-14;3!CL:0000138;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,4.66e-21,2;CL:0002564,2.09e-14,3;CL:0000058,5.92e-08,6;CL:0000138,5.92e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009568!2.22e-12!2;UBERON:0002216!2.22e-12!2;UBERON:0002209!2.22e-12!2;UBERON:0002213!2.22e-12!2;UBERON:0004267!2.22e-12!2;UBERON:0006444!2.22e-12!2;UBERON:0001995!2.22e-12!2;UBERON:0004715!2.22e-12!2;UBERON:0001468!2.22e-12!2;UBERON:0001130!2.22e-12!2;UBERON:0001066!2.22e-12!2;UBERON:0004905!8.01e-11!5;UBERON:0000982!8.01e-11!5;UBERON:0004770!8.01e-11!5;UBERON:0002418!1.54e-08!3;UBERON:0004755!1.54e-08!3;UBERON:0007029!4.25e-07!1;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.99e-32;5!UBERON:0002216;1.99e-32;5!UBERON:0011134;1.99e-32;5!UBERON:0002209;1.99e-32;5!UBERON:0002213;1.99e-32;5!UBERON:0007844;1.99e-32;5!UBERON:0011138;1.99e-32;5!UBERON:0001130;1.99e-32;5!UBERON:0001066;1.99e-32;5!UBERON:0001468;1.99e-32;5!UBERON:0006444;5.15e-21;2!UBERON:0001995;5.15e-21;2!UBERON:0004715;5.15e-21;2!UBERON:0004905;9.92e-21;8!UBERON:0000982;9.92e-21;8!UBERON:0004770;9.92e-21;8!UBERON:0002418;1.71e-14;3!UBERON:0004755;1.71e-14;3!UBERON:0002242;1.71e-14;3!UBERON:0000075;6.45e-11;16!UBERON:0004765;4.28e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.34e-32,5;UBERON:0002216,2.34e-32,5;UBERON:0011134,2.34e-32,5;UBERON:0002209,2.34e-32,5;UBERON:0002213,2.34e-32,5;UBERON:0005856,2.34e-32,5;UBERON:0005866,2.34e-32,5;UBERON:0005863,2.34e-32,5;UBERON:0007844,2.34e-32,5;UBERON:0011138,2.34e-32,5;UBERON:0001130,2.34e-32,5;UBERON:0001066,2.34e-32,5;UBERON:0001468,2.34e-32,5;UBERON:0006444,4.66e-21,2;UBERON:0001995,4.66e-21,2;UBERON:0004715,4.66e-21,2;UBERON:0004905,1.10e-20,8;UBERON:0000982,1.10e-20,8;UBERON:0004770,1.10e-20,8;UBERON:0002418,1.60e-14,3;UBERON:0004755,1.60e-14,3;UBERON:0002242,2.09e-14,3;UBERON:0003068,2.09e-14,3;UBERON:0002328,2.09e-14,3;UBERON:0004880,2.09e-14,3;UBERON:0000075,6.78e-11,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0.869079113764942,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.7647846290532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:12012068..12012098,+ | |||
}} |
Revision as of 18:36, 20 January 2014
Short description: | p@chr18:12012068..12012098, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12012068..12012098, + |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 4.66e-21 | 2 |
nucleus pulposus cell of intervertebral disc | 2.09e-14 | 3 |
chondroblast | 5.92e-08 | 6 |
chondrocyte | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.34e-32 | 5 |
symphysis | 2.34e-32 | 5 |
nonsynovial joint | 2.34e-32 | 5 |
fibrous joint | 2.34e-32 | 5 |
cartilaginous joint | 2.34e-32 | 5 |
developing mesenchymal condensation | 2.34e-32 | 5 |
pre-cartilage condensation | 2.34e-32 | 5 |
cartilaginous condensation | 2.34e-32 | 5 |
cartilage element | 2.34e-32 | 5 |
post-cranial axial skeletal system | 2.34e-32 | 5 |
vertebral column | 2.34e-32 | 5 |
intervertebral disk | 2.34e-32 | 5 |
intervertebral joint | 2.34e-32 | 5 |
annulus fibrosus | 4.66e-21 | 2 |
fibrocartilage | 4.66e-21 | 2 |
annulus fibrosus disci intervertebralis | 4.66e-21 | 2 |
articulation | 1.10e-20 | 8 |
skeletal joint | 1.10e-20 | 8 |
articular system | 1.10e-20 | 8 |
cartilage tissue | 1.60e-14 | 3 |
skeletal tissue | 1.60e-14 | 3 |
nucleus pulposus | 2.09e-14 | 3 |
axial mesoderm | 2.09e-14 | 3 |
notochord | 2.09e-14 | 3 |
chordamesoderm | 2.09e-14 | 3 |
subdivision of skeletal system | 6.78e-11 | 16 |