FFCP PHASE1:Hg19::chr19:52996047..52996089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr19:52996047..52996089,+ | |||
|id=chr19:52996047..52996089,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.97e-14!7;CL:0000586!2.97e-14!7;CL:0002322!6.45e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.53e-41;7!CL:0000586;8.53e-41;7!CL:0002322;1.87e-30;5!CL:0002321;5.36e-10;15!CL:0000540;1.85e-09;6!CL:0000404;1.85e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.60e-41,7;CL:0000586,7.60e-41,7;CL:0002322,1.82e-30,5;CL:0000540,1.88e-09,6;CL:0000031,1.88e-09,6;CL:0000404,1.88e-09,6;CL:0000047,3.40e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.42e-20;10!UBERON:0005564;1.42e-20;10!CL:0000031;1.85e-09;6!UBERON:0003124;7.95e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.22e-16;22!DOID:2994;4.22e-16;22!DOID:6193;7.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-16,22;DOID:2994,4.01e-16,22;DOID:6193,6.12e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.50e-09!14;UBERON:0000158!4.50e-09!14;UBERON:0000473!7.29e-09!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.68e-26;8!UBERON:0003135;1.17e-18;11!UBERON:0000991;1.66e-09;21!UBERON:0003101;4.78e-09;22!UBERON:0000079;4.78e-09;22!UBERON:0000922;4.14e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.04e-25,8;UBERON:0003135,1.46e-18,11;UBERON:0000991,1.86e-09,21;UBERON:0009196,1.86e-09,21;UBERON:0009117,1.86e-09,21;UBERON:0005564,1.86e-09,21;UBERON:0004176,5.31e-09,22;UBERON:0003101,5.31e-09,22;UBERON:0000079,5.31e-09,22;UBERON:0003133,2.95e-08,48 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,1.38096903554283,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.444083879159,21.9999415413666,37.5306435468544,21.5614994431971,21.1949514735528,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38677732358213,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0,0,0,0,1.4098700508785,0.935702702041099,0,0.36408156524854,0,0,0.71623345421307,0.593929361665277,0.921482106297696,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,0,0,0.1137934482855,0.508507300585533,0,0.344743373241465,0,3.29887490373255,0,0,0,0,0,0,0,0,0,0,30.4344353792239,1.52587995496613,6.30154757147647,0.638002319463839,0.366390373607449,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,3.9845336444171,0,0,0,0,0,1.71986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,2.54216797555244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.403100834920358,0,3.49487848582361,0,0.0824158583811665,0,0,0,0,0,16.0753148465019,6.60189295666722,7.06248574649615,0.2249738915515,0,0,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,5.38060765962843,0,0.83244063544298,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75785560942238,0,16.930145737169,24.5840012844316,21.4115115916189,8.022641257356,1.21245917149183,1.07185652062471,0,0,0,0,0,0.124149428591716,2.13050538903166,0.12729431655633,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr19:52996047..52996089,+ | |||
}} |
Revision as of 00:54, 21 January 2014
Short description: | p@chr19:52996047..52996089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:52996047..52996089, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.60e-41 | 7 |
germ cell | 7.60e-41 | 7 |
embryonic stem cell | 1.82e-30 | 5 |
neuron | 1.88e-09 | 6 |
neuroblast | 1.88e-09 | 6 |
electrically signaling cell | 1.88e-09 | 6 |
neuronal stem cell | 3.40e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.04e-25 | 8 |
male reproductive organ | 1.46e-18 | 11 |
gonad | 1.86e-09 | 21 |
indifferent external genitalia | 1.86e-09 | 21 |
indifferent gonad | 1.86e-09 | 21 |
gonad primordium | 1.86e-09 | 21 |
external genitalia | 5.31e-09 | 22 |
male organism | 5.31e-09 | 22 |
male reproductive system | 5.31e-09 | 22 |
reproductive organ | 2.95e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.01e-16 | 22 |
germ cell cancer | 4.01e-16 | 22 |
epithelioid sarcoma | 6.12e-07 | 1 |