FFCP PHASE1:Hg19::chr1:114524352..114524381,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_CU679530_5end | |||
|description=CAGE_peak_1_at_CU679530_5end | |||
|id=chr1:114524352..114524381,- | |||
|ontology_enrichment_celltype=CL:0000055!5.15e-36!180;CL:0000057!3.57e-22!75;CL:0000680!2.54e-11!57;CL:0000056!2.54e-11!57;CL:0000355!2.54e-11!57;CL:0002620!4.13e-11!23;CL:0000393!2.60e-10!60;CL:0000211!2.60e-10!60;CL:0000034!3.88e-10!444;CL:0000183!5.35e-10!59;CL:0000187!9.78e-10!54;CL:0000048!1.03e-09!430;CL:0000723!1.92e-09!436;CL:0002334!1.74e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.90e-12;12!CL:0002620;2.52e-11;23!CL:0000057;3.16e-09;73!CL:0002320;6.24e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.19e-23,76;CL:0000048,3.67e-14,427;CL:0000723,1.41e-13,433;CL:0000034,2.44e-13,441;CL:0002334,2.53e-12,12;CL:0002620,2.47e-11,23;CL:0002320,3.14e-09,361;CL:0000134,7.11e-09,354;CL:0000136,1.39e-08,15;CL:0000219,1.69e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.13e-07;5!DOID:450;1.13e-07;5!DOID:66;1.13e-07;5!DOID:423;1.13e-07;5!DOID:0080000;1.13e-07;5!DOID:11722;1.13e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.25e-07,5;DOID:450,1.25e-07,5;DOID:66,1.25e-07,5;DOID:423,1.25e-07,5;DOID:0080000,1.25e-07,5;DOID:11722,1.25e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.47e-11!83;UBERON:0002329!6.47e-11!83;UBERON:0003077!6.47e-11!83;UBERON:0003059!6.47e-11!83;UBERON:0007282!6.47e-11!83;UBERON:0009618!6.47e-11!83;UBERON:0007285!6.47e-11!83;UBERON:0004290!1.87e-10!70;UBERON:0001134!1.06e-09!61;UBERON:0002036!1.06e-09!61;UBERON:0003082!1.06e-09!61;UBERON:0002385!5.50e-09!63;UBERON:0001015!5.50e-09!63;UBERON:0000383!5.50e-09!63;UBERON:0000486!2.52e-08!82;UBERON:0002199!1.15e-07!45;UBERON:0002416!1.15e-07!45;UBERON:0005256!4.48e-07!143;UBERON:0004923!7.40e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.12e-09;9!UBERON:0000042;2.12e-09;9!UBERON:0003688;6.51e-08;6!UBERON:0002358;6.51e-08;6!UBERON:0003684;6.51e-08;6!UBERON:0001178;6.51e-08;6!UBERON:0002384;7.48e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.91e-10,46;UBERON:0002416,1.91e-10,46;UBERON:0002384,2.46e-09,371;UBERON:0003688,1.43e-07,6;UBERON:0002358,1.43e-07,6;UBERON:0003684,1.43e-07,6;UBERON:0001178,1.43e-07,6;UBERON:0002097,1.45e-07,41 | |||
|phase1_expression=4.1786027232228,1.2846031433459,1.69145284915165,1.0007329835313,4.91657203870017,3.48935409640147,10.1319951267324,1.89515962028049,0.783556884599516,0,0,25.9945232834905,12.6608149549658,0.37129905888014,0,0,0.602694528023977,0,0.975865597581014,0.984968464614303,0.204000691244253,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.66221330396589,2.89151321907653,0.50133791063589,2.17269778441236,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0.261958150995425,0,0,0,0,0.797747763113191,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.13967460498122,0.529636723252875,3.15520282823695,1.77334191099179,1.12135520028461,0,0.49333509683432,1.24484414159907,0,0,0.908144565869588,2.30470369792,0.234321431833797,0.312160076830321,0,1.49448680551801,0.469737994575059,0.161872944368132,0.561803226808994,0.204154171254893,0.61417158655884,0.413303124703062,1.18800285728205,2.47266929278557,0,1.43723628363248,0.841680569770331,0.375355559615893,0,0.877955241761676,1.22595118319608,2.40380894250555,0.453728732640084,1.4351170855109,6.40672166455702,2.33125091275518,6.30191301777245,1.44273540933814,3.09168648054755,2.04728541964749,4.55696097051419,1.85130309806277,2.52433774244115,4.78659472939957,0.484938170456436,6.39017266529906,0.705264687593482,2.20428770003634,0,0,0,0.609868530647977,0.530119073285941,1.39432731443422,0.621966330092223,0.504641701751257,1.45990943630332,0,5.78916844373597,0,2.78620756819187,5.77503585335668,0,0,0,0,0,0,0,0,0,0,1.40241773803446,6.9967581926338,5.88034845542168,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.587043471179108,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0,0.112131084345361,0.43596006883328,0.07333828582095,1.68053230485111,14.3062578340753,0.845302752556,1.86156681609409,1.04007436911366,0.514414748524284,0,0,3.14551586047925,4.88359444852299,0.823240336780769,0,3.55391948742546,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,2.17171960001369,2.05476322550383,3.58121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,2.50085260529839,0,0.415941723061614,3.56857977594324,1.57702415033935,0.702848489956279,0.300946099727719,0,2.0694614258501,1.99267679560631,0.553107505625109,1.30325421702124,0.783204629850962,1.71571711905428,0,0,0,9.7000822862803,13.3148351608398,25.4007846396931,1.24053903909388,1.68808170616869,3.08726103876381,2.30650468660262,1.02341449813341,1.28683136914886,0,2.7757744884478,3.9063579568888,2.7101961484557,1.55776328755086,3.48631135379878,0,0,0,1.03333003348146,0.910455840033585,1.83574180943194,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.183138929636687,0,0,0,0,2.03008508413456,0.308097234229289,0.767518373630648,1.10269257987624,3.86712881525785,3.19036726611303,0.767039646744908,2.8490251406956,0,0,0,0,0.464845549297286,3.77774816196768,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0,0.744316738719335,0.316379424718726,1.71567174531442,1.02359116524534,0,0.318203247925937,0.78494864019923,2.33834194858309,2.19629623788844,1.29593642580255,0,0,0.421258456238981,4.38870365180631,0.487426979262569,0,1.09199929126389,1.27264888758341,0,0.551365343546124,0,0,0.578775534266688,1.9676842561399,0,0.92947049429925,0.281695602532241,0.573645408816206,1.67023369722306,0,2.12856638442359,5.2776908824416,4.28083360847872,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.923403102045565,1.70913083770502,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,1.37588825977293,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,1.39641200636127,0,0,0.199679000498991,0.858452096273142,0,0.335917362433631,1.80149941771202,0,0,0,0,0,0,0,0,2.57205037544031,0.962776056180637,0.83088067605837,0,0,0.0607495566580247,0,0,0.944182586429966,0,0,0,0,0.662091970365432,0,2.71499800876856,0,5.55198512185996,0,0,1.70388021785422,0,0.146552233678082,0,0,0.13223260174269,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,3.432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| |||
|short_description=p1@CU679530 | |||
}} |
Revision as of 20:16, 10 January 2014
Short description: | p1@CU679530 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_CU679530_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_CU679530_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.19e-23 | 76 |
multi fate stem cell | 3.67e-14 | 427 |
somatic stem cell | 1.41e-13 | 433 |
stem cell | 2.44e-13 | 441 |
preadipocyte | 2.53e-12 | 12 |
skin fibroblast | 2.47e-11 | 23 |
connective tissue cell | 3.14e-09 | 361 |
mesenchymal cell | 7.11e-09 | 354 |
fat cell | 1.39e-08 | 15 |
motile cell | 1.69e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
integument | 1.91e-10 | 46 |
integumental system | 1.91e-10 | 46 |
connective tissue | 2.46e-09 | 371 |
omentum | 1.43e-07 | 6 |
peritoneum | 1.43e-07 | 6 |
abdominal cavity | 1.43e-07 | 6 |
visceral peritoneum | 1.43e-07 | 6 |
skin of body | 1.45e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.25e-07 | 5 |
myotonic disease | 1.25e-07 | 5 |
muscle tissue disease | 1.25e-07 | 5 |
myopathy | 1.25e-07 | 5 |
muscular disease | 1.25e-07 | 5 |
myotonic dystrophy | 1.25e-07 | 5 |