FFCP PHASE1:Hg19::chr1:120049809..120049823,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5217 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRN7 | |||
|association_with_transcript=0bp_to_ENST00000531340_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_2_at_HSD3B1_5end | |||
|id=chr1:120049809..120049823,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.95e-20!3;CL:0000039!3.22e-14!7;CL:0000586!3.22e-14!7;CL:0000077!4.42e-11!19;CL:0002563!3.85e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.29e-36;3!CL:0002563;1.75e-12;4!CL:0000349;2.53e-10;19!CL:0000039;1.21e-07;7!CL:0000586;1.21e-07;7!CL:0002253;4.56e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.29e-36,3;CL:0002563,1.75e-12,4;CL:0000349,2.53e-10,19;CL:0000039,1.21e-07,7;CL:0000586,1.21e-07,7;CL:0002253,4.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.61e-13;1 | |||
|ontology_enrichment_disease=DOID:1799!1.72e-07!1;DOID:10165!1.72e-07!1;DOID:1798!1.72e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.73e-13;1!DOID:10165;9.73e-13;1!DOID:1798;9.73e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.73e-13,1;DOID:10165,9.73e-13,1;DOID:1798,9.73e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.95e-20!3;UBERON:0000920!3.95e-20!3;UBERON:0005631!6.92e-16!14;UBERON:0000158!6.92e-16!14;UBERON:0003124!4.23e-15!7;UBERON:0000478!5.04e-09!24;UBERON:0001052!3.63e-07!4;UBERON:0001242!3.85e-07!4;UBERON:0001262!3.85e-07!4;UBERON:0004786!3.85e-07!4;UBERON:0004808!3.85e-07!4;UBERON:0001277!3.85e-07!4;UBERON:0001282!4.34e-07!1;UBERON:0009842!4.34e-07!1;UBERON:0003704!4.34e-07!1;UBERON:0001171!4.34e-07!1;UBERON:0001172!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.29e-36;3!UBERON:0000920;1.29e-36;3!UBERON:0005631;2.23e-19;10!UBERON:0000158;2.23e-19;10!UBERON:0001052;1.61e-12;4!UBERON:0001242;1.75e-12;4!UBERON:0001262;1.75e-12;4!UBERON:0004786;1.75e-12;4!UBERON:0004808;1.75e-12;4!UBERON:0001277;1.75e-12;4!UBERON:0000478;1.96e-12;24!UBERON:0004907;3.34e-10;5!UBERON:0000485;1.63e-07;7!UBERON:0003929;1.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.29e-36,3;UBERON:0003124,8.55e-28,7;UBERON:0005631,2.46e-21,14;UBERON:0000158,2.46e-21,14;UBERON:0001052,1.56e-12,4;UBERON:0001242,1.75e-12,4;UBERON:0001262,1.75e-12,4;UBERON:0004786,1.75e-12,4;UBERON:0004808,1.75e-12,4;UBERON:0001277,1.75e-12,4;UBERON:0000478,1.96e-12,24;UBERON:0004907,3.27e-10,5;UBERON:0004923,3.54e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,25.8632939235783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9355055809895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63982351160608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,6.45578932286568,0.359030577639089,16.6230479040672,33.4951217718515,41.0357218440343,59.6998949140871,0,0,0,0,0,0,0,0,0,0,2.40300221437699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,12.0432564392779,14.4727472721947,0,1.92914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.228003240599,0,0,0,0,0,0.111231401892069,0,0,5.0448989396482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@HSD3B1 | |||
}} |
Revision as of 20:25, 10 January 2014
Short description: | p2@HSD3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HSD3B1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000531340_5end |
EntrezGene: | HSD3B1 |
HGNC: | 5217 |
UniProt: | E9PRN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.29e-36 | 3 |
intestinal epithelial cell | 1.75e-12 | 4 |
extraembryonic cell | 2.53e-10 | 19 |
germ line cell | 1.21e-07 | 7 |
germ cell | 1.21e-07 | 7 |
epithelial cell of large intestine | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.29e-36 | 3 |
chorion | 8.55e-28 | 7 |
extraembryonic membrane | 2.46e-21 | 14 |
membranous layer | 2.46e-21 | 14 |
rectum | 1.56e-12 | 4 |
intestinal mucosa | 1.75e-12 | 4 |
wall of intestine | 1.75e-12 | 4 |
gastrointestinal system mucosa | 1.75e-12 | 4 |
gastrointestinal system epithelium | 1.75e-12 | 4 |
intestinal epithelium | 1.75e-12 | 4 |
extraembryonic structure | 1.96e-12 | 24 |
lower digestive tract | 3.27e-10 | 5 |
organ component layer | 3.54e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.73e-13 | 1 |
endocrine pancreas cancer | 9.73e-13 | 1 |
pancreatic endocrine carcinoma | 9.73e-13 | 1 |