FFCP PHASE1:Hg19::chr1:159749148..159749177,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:159749148..159749177,- | |||
|id=chr1:159749148..159749177,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000413;2.31e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,2.70e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.05e-09;65!UBERON:0009143;5.51e-09;1!UBERON:0004874;5.51e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.06e-65!115;UBERON:0001049!1.20e-24!57;UBERON:0005068!1.20e-24!57;UBERON:0006241!1.20e-24!57;UBERON:0007135!1.20e-24!57;UBERON:0000955!6.30e-21!69;UBERON:0006238!6.30e-21!69;UBERON:0001017!2.63e-20!82;UBERON:0002616!5.67e-20!59;UBERON:0003080!6.52e-19!42;UBERON:0005743!6.66e-19!86;UBERON:0003075!2.15e-18!86;UBERON:0007284!2.15e-18!86;UBERON:0002780!1.73e-17!41;UBERON:0001890!1.73e-17!41;UBERON:0006240!1.73e-17!41;UBERON:0002346!3.90e-17!90;UBERON:0004111!1.28e-16!241;UBERON:0000073!3.47e-16!94;UBERON:0001016!3.47e-16!94;UBERON:0000477!1.53e-14!286;UBERON:0000025!5.11e-14!194;UBERON:0002020!6.60e-13!34;UBERON:0003528!6.60e-13!34;UBERON:0001893!1.79e-12!34;UBERON:0000153!2.00e-12!129;UBERON:0007811!2.00e-12!129;UBERON:0002791!1.53e-11!33;UBERON:0003056!4.44e-11!61;UBERON:0000033!4.92e-11!123;UBERON:0001869!1.80e-10!32;UBERON:0000483!3.70e-10!309;UBERON:0000119!6.59e-10!312;UBERON:0004121!2.97e-09!169;UBERON:0002619!3.24e-09!22;UBERON:0000468!3.27e-09!659;UBERON:0000924!8.36e-09!173;UBERON:0006601!8.36e-09!173;UBERON:0000481!9.30e-09!347;UBERON:0002298!1.98e-08!8;UBERON:0000467!4.02e-08!625;UBERON:0000480!4.53e-08!626;UBERON:0000956!7.77e-08!25;UBERON:0000203!7.77e-08!25;UBERON:0000922!8.84e-08!612;UBERON:0000923!1.28e-07!604;UBERON:0005291!1.28e-07!604;UBERON:0006598!1.28e-07!604;UBERON:0002532!1.28e-07!604;UBERON:0002050!1.44e-07!605;UBERON:0005423!1.44e-07!605;UBERON:0006947!2.65e-07!3;UBERON:0004054!2.65e-07!3;UBERON:0002308!3.77e-07!9;UBERON:0000125!3.77e-07!9;UBERON:0001894!4.01e-07!7;UBERON:0006222!4.01e-07!7;UBERON:0003978!5.74e-07!3;UBERON:0009751!5.74e-07!3;UBERON:0000946!5.74e-07!3;UBERON:0002523!5.74e-07!3;UBERON:0005983!5.74e-07!3;UBERON:0002165!5.74e-07!3;UBERON:0002062!5.74e-07!3;UBERON:0007280!5.74e-07!3;UBERON:0003076!6.10e-07!15;UBERON:0003057!6.10e-07!15;UBERON:0001950!6.40e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.78e-11;3!UBERON:0004054;3.78e-11;3!UBERON:0002134;2.04e-09;1!UBERON:0005208;2.04e-09;1!UBERON:0004145;2.04e-09;1!UBERON:0005946;2.04e-09;1!UBERON:0005965;2.04e-09;1!UBERON:0002078;2.04e-09;1!UBERON:0000996;2.30e-09;1!UBERON:0004175;4.98e-09;21!UBERON:0006834;5.51e-09;1!UBERON:0001000;5.51e-09;1!UBERON:0000989;5.51e-09;1!UBERON:0001301;5.51e-09;1!UBERON:0008811;5.51e-09;1!UBERON:0005352;5.51e-09;1!UBERON:0005904;1.40e-08;4!UBERON:0003915;2.31e-08;9!UBERON:0004700;2.31e-08;9!UBERON:0001917;2.31e-08;9!UBERON:0007023;1.25e-07;114!UBERON:0003135;8.72e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.86e-23,114;UBERON:0006947,4.42e-11,3;UBERON:0004054,4.42e-11,3;UBERON:0002134,2.04e-09,1;UBERON:0005208,2.04e-09,1;UBERON:0005946,2.04e-09,1;UBERON:0005965,2.04e-09,1;UBERON:0002078,2.04e-09,1;UBERON:0000996,2.22e-09,1;UBERON:0000989,2.60e-09,1;UBERON:0008811,2.60e-09,1;UBERON:0006258,2.60e-09,1;UBERON:0005876,2.60e-09,1;UBERON:0004874,2.60e-09,1;UBERON:0001000,4.19e-09,1;UBERON:0005352,4.19e-09,1;UBERON:0006834,6.72e-09,1;UBERON:0001301,9.17e-09,1;UBERON:0005904,1.58e-08,4;UBERON:0003915,2.70e-08,9;UBERON:0004700,2.70e-08,9;UBERON:0001917,2.70e-08,9;UBERON:0004175,1.46e-07,25;UBERON:0003135,7.66e-07,11;UBERON:0003064,9.48e-07,28 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,1.37559020970034,0.626984899610432,0,0,0,0,0,0,0,7.29127753093584,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15334352941955,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0.556608588971108,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,1.69290568708354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,1.57833761139756,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.55182426381471,0,1.80784592624426,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.916641696046735,4.30723814746088,0.199679000498991,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.05786081394152,0,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.625954653532499,0,0.332787154610557,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,1.98484471355718,0,0,0.535701835878287,1.00885116665647,0,0.455324382702595,0,0,0.685952037749674,0,0,0,0,1.41287567130925,0.314231179832004,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,1.7452677165562,0,0,0,0,0,0,0,0,0,0,0,1.22574160876953,0,1.17785080268967,0.594092800654172,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0,0.829169439458779,0.620597975171371,0.213233981900981,0,0.0645889098360061,0.31037357147929,0.112131862580613,0.190941474834495,0,0.870866991587845,0.342233301085281,0.202056159043763,5.88122084219946,0,0,0,0,0,0,1.34465588601153,0,2.66302709674205,1.61019034872821,0 | |||
|short_description=p@chr1:159749148..159749177,- | |||
}} |
Revision as of 21:39, 10 January 2014
Short description: | p@chr1:159749148..159749177, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:159749148..159749177, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 2.70e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.86e-23 | 114 |
male genital duct | 4.42e-11 | 3 |
internal male genitalia | 4.42e-11 | 3 |
tricuspid valve | 2.04e-09 | 1 |
right atrium valve | 2.04e-09 | 1 |
outflow tract of atrium | 2.04e-09 | 1 |
outflow part of right atrium | 2.04e-09 | 1 |
right cardiac atrium | 2.04e-09 | 1 |
vagina | 2.22e-09 | 1 |
penis | 2.60e-09 | 1 |
intromittent organ | 2.60e-09 | 1 |
lateral plate mesenchyme | 2.60e-09 | 1 |
undifferentiated genital tubercle | 2.60e-09 | 1 |
somatopleure | 2.60e-09 | 1 |
vas deferens | 4.19e-09 | 1 |
spermatic cord | 4.19e-09 | 1 |
uterus or analog | 6.72e-09 | 1 |
epididymis | 9.17e-09 | 1 |
duct of male reproductive system | 1.58e-08 | 4 |
endothelial tube | 2.70e-08 | 9 |
arterial system endothelium | 2.70e-08 | 9 |
endothelium of artery | 2.70e-08 | 9 |
internal genitalia | 1.46e-07 | 25 |
male reproductive organ | 7.66e-07 | 11 |
intermediate mesoderm | 9.48e-07 | 28 |