FFCP PHASE1:Hg19::chr1:183209335..183209346,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183209335..183209346,- | |||
|id=chr1:183209335..183209346,- | |||
|ontology_enrichment_celltype=CL:0000066!8.86e-29!254;CL:0002076!2.21e-27!43;CL:0000223!3.31e-18!59;CL:0002368!1.43e-15!13;CL:0002251!4.45e-13!21;CL:0002159!6.28e-13!13;CL:0000244!3.29e-12!4;CL:0000731!3.29e-12!4;CL:0002166!2.03e-09!3;CL:0002621!3.15e-09!3;CL:0002328!4.88e-09!3;CL:0000349!5.15e-09!3;CL:0002577!5.15e-09!3;CL:0000240!3.55e-08!6;CL:0000311!3.55e-08!6;CL:0000079!3.55e-08!6;CL:0000237!3.55e-08!6;CL:0000036!3.55e-08!6;CL:0000357!3.55e-08!6;CL:0000114!3.55e-08!6;CL:0002077!6.91e-08!33;CL:0002202!1.74e-07!9;CL:0002632!1.74e-07!9;CL:0000063!2.08e-07!578;CL:0002327!3.29e-07!4;CL:0000220!4.20e-07!246;CL:0002321!5.65e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000240;1.24e-22;6!CL:0000311;1.24e-22;6!CL:0000079;1.24e-22;6!CL:0000237;1.24e-22;6!CL:0000244;1.14e-19;4!CL:0000731;1.14e-19;4!CL:0002327;2.67e-19;4!CL:0000312;7.22e-16;5!CL:0002159;5.97e-15;14!CL:0002621;3.18e-12;3!CL:0002166;3.77e-12;3!CL:0002368;1.69e-10;13!CL:0002076;5.01e-10;42!CL:0002336;1.55e-09;1!CL:0002261;1.55e-09;1!CL:0002170;1.55e-09;1!CL:0000362;4.74e-09;9!CL:0002077;1.88e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,1.18e-22,6;CL:0000311,1.18e-22,6;CL:0000079,1.18e-22,6;CL:0000237,1.18e-22,6;CL:0000036,1.18e-22,6;CL:0000357,1.18e-22,6;CL:0000114,1.18e-22,6;CL:0000244,8.88e-20,4;CL:0000731,8.88e-20,4;CL:0002327,3.33e-19,4;CL:0000312,9.53e-16,5;CL:0000066,1.80e-15,253;CL:0002159,7.67e-15,14;CL:0002621,2.85e-12,3;CL:0002166,4.46e-12,3;CL:0002076,8.96e-12,42;CL:0002368,1.82e-10,13;CL:0002336,8.91e-10,1;CL:0002261,8.91e-10,1;CL:0002170,8.91e-10,1;CL:0000362,5.52e-09,9;CL:0002077,2.06e-08,34;CL:0000223,3.09e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000357;1.24e-22;6!CL:0000114;1.24e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.44e-10!169;UBERON:0000925!4.44e-10!169;UBERON:0006595!4.44e-10!169;UBERON:0000365!9.49e-10!5;UBERON:0001949!3.15e-09!3;UBERON:0004815!4.88e-09!3;UBERON:0002031!4.88e-09!3;UBERON:0005910!4.18e-08!6;UBERON:0001004!1.83e-07!72;UBERON:0001911!3.29e-07!4;UBERON:0005333!3.29e-07!4;UBERON:0008425!3.29e-07!4;UBERON:0005311!3.29e-07!4;UBERON:0001708!3.88e-07!4;UBERON:0001704!3.88e-07!4;UBERON:0005911!4.89e-07!82;UBERON:0002185!7.39e-07!4;UBERON:0001987!7.69e-07!4;UBERON:0004340!7.69e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.67e-19;4!UBERON:0000486;1.69e-17;12!UBERON:0000365;7.40e-16;5!UBERON:0005910;2.61e-13;6!UBERON:0001949;3.18e-12;3!UBERON:0001708;2.46e-09;4!UBERON:0008895;2.46e-09;4!UBERON:0011159;1.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.33e-19,4;UBERON:0005333,3.33e-19,4;UBERON:0008425,3.33e-19,4;UBERON:0005311,3.33e-19,4;UBERON:0000365,6.06e-16,5;UBERON:0005910,2.21e-13,6;UBERON:0001949,2.85e-12,3;UBERON:0000076,6.93e-10,8;UBERON:0001708,2.79e-09,4;UBERON:0008895,2.79e-09,4;UBERON:0011159,1.36e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,4.09119180886252,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39001141634502,1.1240175325762,3.01586917234893,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,3.69560682037491,1.13420077793909,3.31366534000539,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,6.21570057940183,0.920809889358963,0,0,0,0,0.539107359730903,0,0,1.26661954671451,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,3.8015530533025,1.53752053892085,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0,1.08890984861323,0,2.15252686335615,1.68471475667626,0.886860307073351,12.8645104115897,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.511049710558381,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.62164849248911,0.17071847709395,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183209335..183209346,- | |||
}} |
Revision as of 22:40, 10 January 2014
Short description: | p@chr1:183209335..183209346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183209335..183209346, - |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 1.18e-22 | 6 |
keratin accumulating cell | 1.18e-22 | 6 |
stratified epithelial cell | 1.18e-22 | 6 |
keratinizing barrier epithelial cell | 1.18e-22 | 6 |
epithelial fate stem cell | 1.18e-22 | 6 |
stratified epithelial stem cell | 1.18e-22 | 6 |
surface ectodermal cell | 1.18e-22 | 6 |
transitional epithelial cell | 8.88e-20 | 4 |
urothelial cell | 8.88e-20 | 4 |
mammary gland epithelial cell | 3.33e-19 | 4 |
keratinocyte | 9.53e-16 | 5 |
epithelial cell | 1.80e-15 | 253 |
general ecto-epithelial cell | 7.67e-15 | 14 |
gingival epithelial cell | 2.85e-12 | 3 |
epithelial cell of Malassez | 4.46e-12 | 3 |
endo-epithelial cell | 8.96e-12 | 42 |
respiratory epithelial cell | 1.82e-10 | 13 |
buccal mucosa cell | 8.91e-10 | 1 |
endothelial cell of viscerocranial mucosa | 8.91e-10 | 1 |
keratinized cell of the oral mucosa | 8.91e-10 | 1 |
epidermal cell | 5.52e-09 | 9 |
ecto-epithelial cell | 2.06e-08 | 34 |
endodermal cell | 3.09e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.33e-19 | 4 |
mammary bud | 3.33e-19 | 4 |
mammary ridge | 3.33e-19 | 4 |
mammary placode | 3.33e-19 | 4 |
urothelium | 6.06e-16 | 5 |
transitional epithelium | 2.21e-13 | 6 |
gingival epithelium | 2.85e-12 | 3 |
external ectoderm | 6.93e-10 | 8 |
jaw skeleton | 2.79e-09 | 4 |
splanchnocranium | 2.79e-09 | 4 |
primary subdivision of cranial skeletal system | 1.36e-07 | 5 |