FFCP PHASE1:Hg19::chr1:2065121..2065166,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |||
|TSSclassifier=strong | |||
|UniProt=D6RC84 | |||
|association_with_transcript=44bp_to_ENST00000471018_5end | |||
|description=CAGE_peak_9_at_PRKCZ_5end | |||
|id=chr1:2065121..2065166,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.30e-20;19!CL:0000775;1.53e-10;3!CL:0002541;3.43e-10;3!CL:0002537;4.65e-10;5!CL:0002567;1.28e-09;3!CL:0002577;1.28e-09;3!CL:0001014;7.05e-07;2!CL:0001016;7.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.66e-20,19;CL:0000775,1.53e-10,3;CL:0002541,3.27e-10,3;CL:0002537,6.21e-10,5;CL:0002567,1.04e-09,3;CL:0002577,1.24e-09,3;CL:0001014,7.10e-07,2;CL:0001016,7.10e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.43e-12!14;UBERON:0000158!9.43e-12!14;UBERON:0000478!1.71e-08!24;UBERON:0003124!3.81e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.68e-21;24!UBERON:0005631;1.08e-18;10!UBERON:0000158;1.08e-18;10!UBERON:0001987;5.53e-12;4!UBERON:0000305;8.31e-11;7!UBERON:0003124;3.43e-10;3!UBERON:0000920;3.43e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.29e-28,14;UBERON:0000158,1.29e-28,14;UBERON:0000478,2.31e-21,24;UBERON:0003124,1.94e-20,7;UBERON:0001987,5.85e-12,4;UBERON:0004340,5.85e-12,4;UBERON:0000305,1.06e-10,7;UBERON:0000920,3.27e-10,3;UBERON:0004871,2.61e-09,8;UBERON:0003081,2.48e-07,203 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0.873765488520689,2.63766978228454,0.37129905888014,1.65698687863958,0.672325146451775,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0,0,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,1.03423704220986,0,2.70852973188684,0.941211697713023,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,2.55734850319616,0,0,0,0.580418477257168,0,0,1.00499466102697,0,0.217188844705117,0,0.368277635987565,0.316462387440884,1.05627643155971,0.850417199860174,0.209658645508376,6.40273197535022,1.05123824989054,0.803627933485401,1.99508920618874,0.79566670879636,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0,1.85041349099558,0,1.62961133316795,0,0,0.222820913770347,0.883817722424512,0.221533894583621,0,0.128091319725675,0,0,0,0,1.92772532110679,0.267540828089713,1.04535523804977,0.113309342697566,1.53288197440768,0.68725489096526,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.579297615531196,0,0,0,0,1.50401373190767,1.59331170856906,0,9.24606253575008,0.0945348171640679,0.221729397462564,0.087834785693126,0.72038491523742,0,0,0.324547393654683,0.174129737299267,0,1.19245312152671,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0.496971951695318,0,0.264818361626438,0.573673241497627,0.354668382198357,1.12135520028461,0,0.24666754841716,0.622422070799533,0,0,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.538168907066586,0,0,0.600182192168805,0,0.515281080091258,0.37223371266318,0.168776332241266,0.194874010322397,1.26216887122057,0.276149695926898,0.484938170456436,0.710019185033229,0,0.169560592310488,0,0.272746120590835,0,0,0.265059536642971,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0.576479813667846,1.00993946741104,0.126995788584338,1.52795370223311,2.34434894420094,3.4214489204541,0.205654985406647,0.600686115687835,1.42913216315289,0.336393253036082,0,0.2933531432838,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,0.57191197463259,2.17048642156577,0,0,1.06617584622764,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0.591092280605782,0.215627574859517,1.02674429023799,0,0,0,0.335032530668698,0.637938751653163,5.99205619157746,14.9580729602012,7.87389475528467,0.24538298343828,0,0.542530047399471,0,0.178428988797162,0,0.234282829985426,0.601892199455438,0,0,0,0.184369168541703,0,0.783204629850962,0.686286847621712,1.24060815673732,2.37285620900479,0.640365346820666,1.21251028578504,3.32870879020994,2.72151263996712,0.496215615637554,0.61384789315225,0,0.768834895534206,0.511707249066704,0.160853921143607,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,1.00253235151642,0,0,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0.580024309752732,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0.532306030317022,0.869932992075073,0.18532421910392,0,0.744316738719335,0,0,0,0,1.27281299170375,1.56989728039846,0.359744915166629,0,0.353437207037059,0,0,0.421258456238981,0,0,1.05650146756755,0.9554993798559,0.141405431953713,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0.422215270595328,0,0.379473173765715,0,0.192444225451024,0,0,0,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,1.62009431171434,0,0.213648142254946,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0.284136146806413,3.34242278632766,3.26661148915902,3.37876772309155,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,0.371072392647405,0,0,0,0,0,1.01701460117107,0.472775363535873,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,1.38338342632836,2.87224462111271,8.69178975376064,2.87101043758728,3.20591576906518,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,1.97292201424695,0,0,0.189559738885464,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0.293977192243133,0,0.34945333648406,0.171986032471617,0,0,0,0,0.353024506766001,0.451961481561065,0,0,0.126621591911757,0.391102765469606,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0.558564802544508,0,0,1.99679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,1.349843349309,3.0952078182318,0.242998226632099,0,0,0.472091293214983,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0.340776043570843,0.226624183040251,0.146552233678082,0,0.517131825446202,0.39669780522807,0,0.704815022316672,1.06787412567695,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0.909894705249887,1.99825733481477,0,0,0,0.149254802886874,0.934853239388898,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0.907385542579434,0,0,0.159296767163702,0.449803112163605,0,0,0.53168342911599,0,0.150257608997218,0,0,0.363697318405119,0,0,0.796191777397232,0,0,0.336749488765919,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0.398594520940089,0,0,0,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0.215649622793364,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.207471757392654,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0,0,0,0,0.300841313397029,0.20170506870352,0,1.04762677792569,0,0,0.540300676947157,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0,1.1531308121143,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,1.82631744101899,0,0,0.571812353413251,0,0,0.521574816907738,0,0,0,0,0,0,0.170426809518315,0.846774100381858,0,0,0,0,0.196300467230486,0.243835849964539,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0.475940431336403,0,0,0,0.462175628631418,0,0.252332849670158,0.109265571963696,0,0.101988829741982,0,0.0918948995348449,0,0.833565680400634,2.14371304124943,0.829169439458779,0.103432995861895,0,0.714193294391221,0.387533459016037,0.248298857183432,0,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0.0898252021065869,2.34640942403454,0.244482888365733,0,0,0,0 | |||
|short_description=p9@PRKCZ | |||
}} |
Revision as of 15:52, 10 January 2014
Short description: | p9@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRKCZ_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000471018_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | D6RC84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.66e-20 | 19 |
neutrophil | 1.53e-10 | 3 |
chorionic membrane mesenchymal stem cell | 3.27e-10 | 3 |
amnion mesenchymal stem cell | 6.21e-10 | 5 |
light melanocyte | 1.04e-09 | 3 |
placental epithelial cell | 1.24e-09 | 3 |
CD1a-positive Langerhans cell | 7.10e-07 | 2 |
immature CD1a-positive Langerhans cell | 7.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.29e-28 | 14 |
membranous layer | 1.29e-28 | 14 |
extraembryonic structure | 2.31e-21 | 24 |
chorion | 1.94e-20 | 7 |
placenta | 5.85e-12 | 4 |
allantois | 5.85e-12 | 4 |
amnion | 1.06e-10 | 7 |
egg chorion | 3.27e-10 | 3 |
somatic layer of lateral plate mesoderm | 2.61e-09 | 8 |
lateral plate mesoderm | 2.48e-07 | 203 |