FFCP PHASE1:Hg19::chr1:94995248..94995299,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C935 | |||
|description=CAGE_peak_at_chr1:94995248..94995299,- | |||
|id=chr1:94995248..94995299,- | |||
|ontology_enrichment_celltype=CL:0002076!2.82e-12!43;CL:0000223!3.56e-08!59;CL:0002368!7.84e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.22e-14;42!CL:0002368;6.93e-13;13!CL:0000244;2.63e-09;4!CL:0000731;2.63e-09;4!CL:0002251;5.94e-08;20!CL:0002159;1.74e-07;14!CL:0002621;3.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.99e-18,42;CL:0002368,2.04e-12,13;CL:0000223,2.65e-11,58;CL:0000244,2.52e-09,4;CL:0000731,2.52e-09,4;CL:0000066,4.69e-09,253;CL:0002251,4.17e-08,20;CL:0002159,1.23e-07,14;CL:0002621,2.60e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;6.15e-07;58 | |||
|ontology_enrichment_disease=DOID:193!8.83e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.12e-13!511;UBERON:0000467!8.50e-11!625;UBERON:0000480!1.19e-10!626;UBERON:0000468!3.96e-10!659;UBERON:0000033!8.25e-10!123;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0000153!3.93e-09!129;UBERON:0007811!3.93e-09!129;UBERON:0002020!4.44e-09!34;UBERON:0003528!4.44e-09!34;UBERON:0001049!5.81e-09!57;UBERON:0005068!5.81e-09!57;UBERON:0006241!5.81e-09!57;UBERON:0007135!5.81e-09!57;UBERON:0002346!6.76e-09!90;UBERON:0000064!8.33e-09!219;UBERON:0002616!1.15e-08!59;UBERON:0004121!1.96e-08!169;UBERON:0000475!2.07e-08!365;UBERON:0001869!3.93e-08!32;UBERON:0003056!4.89e-08!61;UBERON:0000924!5.54e-08!173;UBERON:0006601!5.54e-08!173;UBERON:0003080!7.26e-08!42;UBERON:0001893!1.13e-07!34;UBERON:0002791!1.22e-07!33;UBERON:0005743!1.77e-07!86;UBERON:0000955!1.82e-07!69;UBERON:0006238!1.82e-07!69;UBERON:0002780!2.32e-07!41;UBERON:0001890!2.32e-07!41;UBERON:0006240!2.32e-07!41;UBERON:0000956!5.49e-07!25;UBERON:0000203!5.49e-07!25;UBERON:0001017!8.34e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.03e-08;12!UBERON:0000365;2.15e-07;5!UBERON:0001949;3.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.66e-08,160;UBERON:0000925,8.66e-08,160;UBERON:0006595,8.66e-08,160;UBERON:0000365,2.08e-07,5;UBERON:0001949,2.60e-07,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.522371256399677,1.22866968250754,2.09340350391728,0.873765488520689,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0.919421224478927,2.10844143144775,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,2.3015391385772,0.512321413058201,0.709446689665756,2.41321976515633,1.29096936716765,0,0,0,0,0.918251677112708,0.962787081228281,0,0,0,0,2.03146467040009,1.70215567407342,1.24564449799115,0,0,0,1.81619850790011,0.368277635987565,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0.665188192387692,0.702678285545008,0.130979075497713,1.45718115317017,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,1.49091585508596,0.12663051166458,0.529636723252875,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.454072282934794,4.60940739583999,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0,0,0,0.30648779579902,0,0.113432183160021,2.51145489964407,0.427114777637135,1.27159140695737,0.600182192168805,0.412210116953756,0.772921620136887,0.558350568994769,0.506328996723799,0.194874010322397,1.26216887122057,0.368199594569197,0.161646056818812,1.42003837006646,0.302256294682921,0.339121184620975,3.86521706326594,6.54590689418003,2.86804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0.435758888184812,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.686271241194102,3.84125998930189,1.1240175325762,8.94707854463515,1.66659201285353,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,1.87467667973554,1.6798212819886,3.40260233381728,2.4180801129769,3.19697332365358,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,1.74306691720059,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0.260650843404249,0,1.02943027143257,0,0,0,0,0,0.30239029332968,0.248107807818777,1.07423381301644,0.280660094433074,0.256278298511402,0,0.804269605718038,0,0.616838775210622,1.77561725313127,0.328508624055237,2.07701771673448,0.929683027679674,0,6.41620704970512,0.552485933615378,1.60740227430449,0.910455840033585,0.393373244878272,0,0.231046011313244,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0.895499018888713,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0,0,7.76839102196597,5.57351195358808,5.87018477475087,1.51736671283325,0,2.20368642781448,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,0,0,0,1.43897966066652,1.64722217841633,0.942499218765491,0,0,0,1.46290121726877,0,0,0.136499911407986,1.83827061539827,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0.349934720244983,1.25088746543166,2.01090682660736,1.08890984861323,0,4.3050537267123,5.05414427002877,4.43430153536676,3.90529780351831,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,1.22864280839693,2.98244294329889,0.984685914873589,0,0,0,0.398495976502139,0,0.503865495708552,0,0,0.933118762985422,2.24670877868317,2.68531762013414,0,0.0986434056369336,0,0,1.93866549219044,0.371072392647405,1.99613798001194,0,0,2.17499872630438,0.227586896570999,1.27126825146383,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,1.09692698576986,0,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.108647371922008,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0.782658475728359,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0.520679215005393,2.15583274311631,1.04471047896483,0,0,0,0,0.0821154570532092,0,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.801588202515337,0,1.19885765749278,0.288180834308212,0,0,0,0,0.942776138467182,0.135904206073614,0,0,0,0.600420288709789,0.821432273351958,0,1.28929632425987,0,0.279282401272254,0.229160424011684,0.717873024576814,0.399358000997982,0,0.446342914883745,0.134366944973453,1.44119953416961,0,0,0,0.0674035438541849,0,0,3.18091875923721,0.953423842781029,0,0,0,0,0,0.121499113316049,0,0.07880570729919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| |||
|short_description=p@chr1:94995248..94995299,- | |||
}} |
Revision as of 19:39, 10 January 2014
Short description: | p@chr1:94995248..94995299, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94995248..94995299, - |
Coexpression cluster: | C935_Small_Mallassezderived_Gingival_normal_mucinous_Urothelial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.99e-18 | 42 |
respiratory epithelial cell | 2.04e-12 | 13 |
endodermal cell | 2.65e-11 | 58 |
transitional epithelial cell | 2.52e-09 | 4 |
urothelial cell | 2.52e-09 | 4 |
epithelial cell | 4.69e-09 | 253 |
epithelial cell of alimentary canal | 4.17e-08 | 20 |
general ecto-epithelial cell | 1.23e-07 | 14 |
gingival epithelial cell | 2.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.66e-08 | 160 |
endoderm | 8.66e-08 | 160 |
presumptive endoderm | 8.66e-08 | 160 |
urothelium | 2.08e-07 | 5 |
gingival epithelium | 2.60e-07 | 3 |