FFCP PHASE1:Hg19::chr21:31588401..31588433,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9073 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2050 | |||
|TSSclassifier=strong | |||
|UniProt=P56748,F5H2X4 | |||
|association_with_transcript=-10bp_to_ENST00000399899,ENST00000536721_5end | |||
|coexpression_cluster_id=C1877 | |||
|description=CAGE_peak_3_at_CLDN8_5end | |||
|id=chr21:31588401..31588433,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.27e-09;1!UBERON:0009143;1.10e-08;1!UBERON:0008801;1.10e-08;1!UBERON:0003124;1.10e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.05e-21!115;UBERON:0001044!2.83e-15!6;UBERON:0003293!2.83e-15!6;UBERON:0003294!2.83e-15!6;UBERON:0010047!2.83e-15!6;UBERON:0000167!2.83e-15!6;UBERON:0000161!2.96e-14!35;UBERON:0000166!3.40e-12!21;UBERON:0001007!4.63e-12!155;UBERON:0001555!4.63e-12!155;UBERON:0007026!4.63e-12!155;UBERON:0006947!6.63e-12!3;UBERON:0004054!6.63e-12!3;UBERON:0000078!1.25e-11!18;UBERON:0004119!1.52e-11!169;UBERON:0000925!1.52e-11!169;UBERON:0006595!1.52e-11!169;UBERON:0004921!5.33e-11!129;UBERON:0004185!5.33e-11!129;UBERON:0000077!7.15e-10!130;UBERON:0003408!4.97e-09!10;UBERON:0005904!4.97e-09!4;UBERON:0001829!6.56e-09!2;UBERON:0000464!6.62e-09!104;UBERON:0000165!9.82e-09!28;UBERON:0000930!9.82e-09!28;UBERON:0005156!1.07e-08!59;UBERON:0000990!1.07e-08!59;UBERON:0000341!1.34e-08!2;UBERON:0004175!3.37e-08!25;UBERON:0003133!3.40e-08!48;UBERON:0003135!4.27e-08!11;UBERON:0001004!9.19e-08!72;UBERON:0000466!2.13e-07!126;UBERON:0003101!4.02e-07!22;UBERON:0000079!4.02e-07!22;UBERON:0002553!8.84e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.74e-16;2!UBERON:0000341;5.70e-15;2!UBERON:0001044;8.60e-12;6!UBERON:0003293;8.60e-12;6!UBERON:0003294;8.60e-12;6!UBERON:0010047;8.60e-12;6!UBERON:0003408;8.60e-12;6!UBERON:0000167;8.60e-12;6!UBERON:0006947;1.25e-10;3!UBERON:0004054;1.25e-10;3!UBERON:0001736;7.27e-09;1!UBERON:0001301;7.27e-09;1!UBERON:0004921;7.56e-09;33!UBERON:0001831;1.10e-08;1!UBERON:0001567;1.10e-08;1!UBERON:0001041;1.11e-08;14!UBERON:0002372;2.46e-08;1!UBERON:0007029;2.46e-08;1!UBERON:0001000;2.46e-08;1!UBERON:0002171;2.46e-08;1!UBERON:0001961;2.46e-08;1!UBERON:0001744;2.46e-08;1!UBERON:0006518;2.46e-08;1!UBERON:0008949;2.46e-08;1!UBERON:0000101;2.46e-08;1!UBERON:0005352;2.46e-08;1!UBERON:0001042;2.46e-08;1!UBERON:0002167;2.46e-08;1!UBERON:0001735;2.46e-08;1!UBERON:0005904;3.47e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.47e-16,2;UBERON:0000341,2.99e-15,2;UBERON:0007023,6.16e-15,114;UBERON:0001044,8.45e-12,6;UBERON:0003293,8.45e-12,6;UBERON:0003294,8.45e-12,6;UBERON:0010047,8.45e-12,6;UBERON:0000167,8.45e-12,6;UBERON:0006947,1.41e-10,3;UBERON:0004054,1.41e-10,3;UBERON:0001301,7.01e-09,1;UBERON:0001736,7.56e-09,1;UBERON:0006298,7.56e-09,1;UBERON:0001831,1.02e-08,1;UBERON:0001567,1.02e-08,1;UBERON:0008801,1.02e-08,1;UBERON:0007029,2.29e-08,1;UBERON:0002171,2.46e-08,1;UBERON:0006518,2.46e-08,1;UBERON:0008949,2.46e-08,1;UBERON:0000101,2.46e-08,1;UBERON:0002167,2.46e-08,1;UBERON:0001000,3.06e-08,1;UBERON:0005352,3.06e-08,1;UBERON:0002372,3.53e-08,1;UBERON:0001961,3.53e-08,1;UBERON:0001744,3.53e-08,1;UBERON:0001735,3.53e-08,1;UBERON:0005904,3.80e-08,4;UBERON:0003408,2.93e-07,10;UBERON:0004119,3.80e-07,160;UBERON:0000925,3.80e-07,160;UBERON:0006595,3.80e-07,160;UBERON:0004175,4.54e-07,25;UBERON:0001007,5.81e-07,145;UBERON:0001555,5.81e-07,145;UBERON:0007026,5.81e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0,0.437299999980979,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,17.2885442905468,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,1.22206028986725,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,5.41652671550293,0,0,0,0,3.10364852762942,0,0.451961481561065,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11698785181741,4.35373081520484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06787412567695,2.67247318669432,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,3.83780436800028,0.992422356778588,0,0.511049710558381,0,0,0,0.227662191351298,3.45939243634291,0,0,0,0,0,0.111231401892069,2.98273752831953,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,10.7556839705069,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,5.04602211744995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,1.70587185520785,1.66645102024618,0,0,0,4.13706528808072,1.21270313374932,0.653150243690884,0.342233301085281,1.14498490124799,1.86477734020959,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p3@CLDN8 | |||
}} |
Revision as of 13:20, 21 January 2014
Short description: | p3@CLDN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLDN8_5end |
Coexpression cluster: | C1877_kidney_cervical_salivary_parotid_submaxillary_epididymis_thyroid |
Association with transcript: | -10bp_to_ENST00000399899, ENST00000536721_5end |
EntrezGene: | CLDN8 |
HGNC: | 2050 |
UniProt: | P56748F5H2X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.47e-16 | 2 |
throat | 2.99e-15 | 2 |
adult organism | 6.16e-15 | 114 |
saliva-secreting gland | 8.45e-12 | 6 |
gland of oral region | 8.45e-12 | 6 |
gland of foregut | 8.45e-12 | 6 |
oral gland | 8.45e-12 | 6 |
oral cavity | 8.45e-12 | 6 |
male genital duct | 1.41e-10 | 3 |
internal male genitalia | 1.41e-10 | 3 |
epididymis | 7.01e-09 | 1 |
submandibular gland | 7.56e-09 | 1 |
submandibular gland primordium | 7.56e-09 | 1 |
parotid gland | 1.02e-08 | 1 |
cheek | 1.02e-08 | 1 |
parotid gland primordium | 1.02e-08 | 1 |
surface | 2.29e-08 | 1 |
lower lobe of right lung | 2.46e-08 | 1 |
right lung lobe | 2.46e-08 | 1 |
lower lobe of lung | 2.46e-08 | 1 |
lobe of lung | 2.46e-08 | 1 |
right lung | 2.46e-08 | 1 |
vas deferens | 3.06e-08 | 1 |
spermatic cord | 3.06e-08 | 1 |
tonsil | 3.53e-08 | 1 |
mucosa-associated lymphoid tissue | 3.53e-08 | 1 |
lymphoid tissue | 3.53e-08 | 1 |
tonsillar ring | 3.53e-08 | 1 |
duct of male reproductive system | 3.80e-08 | 4 |
gland of gut | 2.93e-07 | 10 |
endoderm-derived structure | 3.80e-07 | 160 |
endoderm | 3.80e-07 | 160 |
presumptive endoderm | 3.80e-07 | 160 |
internal genitalia | 4.54e-07 | 25 |
digestive system | 5.81e-07 | 145 |
digestive tract | 5.81e-07 | 145 |
primitive gut | 5.81e-07 | 145 |