FFCP PHASE1:Hg19::chr21:40693490..40693502,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54014 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12760 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000470108_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_6_at_BRWD1_5end | |||
|id=chr21:40693490..40693502,- | |||
|ontology_enrichment_celltype=CL:0002541!6.06e-14!3;CL:0000066!2.67e-11!254;CL:1000415!1.65e-09!2;CL:0002536!2.41e-09!2;CL:0002076!1.08e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.93e-21;3!CL:0000349;5.25e-13;19!CL:1000415;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.70e-21,3;CL:0000349,5.77e-13,19;CL:1000415,4.70e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.72e-17;1!UBERON:0008425;7.57e-17;1 | |||
|ontology_enrichment_disease=DOID:5093!2.20e-18!4;DOID:1612!2.20e-18!4;DOID:305!9.25e-10!106;DOID:0050687!5.85e-08!143;DOID:7!2.30e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.07e-34;4!DOID:1612;1.07e-34;4!DOID:178;1.04e-16;1!DOID:326;1.04e-16;1!DOID:3978;1.04e-16;1!DOID:3394;1.04e-16;1!DOID:5844;1.04e-16;1!DOID:114;5.08e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.56e-35,4;DOID:1612,7.56e-35,4;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:114,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.84e-29!14;UBERON:0000158!1.84e-29!14;UBERON:0003124!2.37e-22!7;UBERON:0000478!2.40e-16!24;UBERON:0000476!6.06e-14!3;UBERON:0000920!6.06e-14!3;UBERON:0001987!1.30e-10!4;UBERON:0004340!1.30e-10!4;UBERON:0000305!4.30e-10!7;UBERON:0004871!7.76e-09!8;UBERON:0004923!1.86e-08!57;UBERON:0001737!1.62e-07!9;UBERON:0004175!2.14e-07!25;UBERON:0000310!2.26e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.93e-21;3!UBERON:0000920;4.93e-21;3!UBERON:0001987;2.35e-16;4!UBERON:0000478;7.51e-16;24!UBERON:0000310;2.55e-14;10!UBERON:0005631;3.43e-14;10!UBERON:0000158;3.43e-14;10!UBERON:0001443;4.47e-13;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,8.81e-35,7;UBERON:0005631,5.25e-27,14;UBERON:0000158,5.25e-27,14;UBERON:0000920,6.70e-21,3;UBERON:0001987,2.64e-16,4;UBERON:0004340,2.64e-16,4;UBERON:0000478,8.25e-16,24;UBERON:0000310,2.23e-14,10;UBERON:0001443,3.95e-13,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.837905677272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.345439526615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,1.48482340416319,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,1.30213880542617,6.47203999971848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,2.28159481036217,1.27600463892768,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0.873633341210151,0,0,0,0,0,0,0,0,0,0,2.93327074102205,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2082598115519,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@BRWD1 | |||
}} |
Revision as of 13:48, 21 January 2014
Short description: | p6@BRWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BRWD1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -5bp_to_ENST00000470108_5end |
EntrezGene: | BRWD1 |
HGNC: | 12760 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.70e-21 | 3 |
extraembryonic cell | 5.77e-13 | 19 |
epithelial cell of gall bladder | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 8.81e-35 | 7 |
extraembryonic membrane | 5.25e-27 | 14 |
membranous layer | 5.25e-27 | 14 |
egg chorion | 6.70e-21 | 3 |
placenta | 2.64e-16 | 4 |
allantois | 2.64e-16 | 4 |
extraembryonic structure | 8.25e-16 | 24 |
breast | 2.23e-14 | 10 |
chest | 3.95e-13 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.56e-35 | 4 |
breast cancer | 7.56e-35 | 4 |
vascular disease | 1.21e-16 | 1 |
ischemia | 1.21e-16 | 1 |
extrinsic cardiomyopathy | 1.21e-16 | 1 |
myocardial ischemia | 1.21e-16 | 1 |
myocardial infarction | 1.21e-16 | 1 |
heart disease | 5.49e-09 | 2 |