FFCP PHASE1:Hg19::chr21:43954677..43954686,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-126bp_to_AK124103_5end | |||
|description=CAGE_peak_3_at_AK124103_5end | |||
|id=chr21:43954677..43954686,- | |||
|ontology_enrichment_celltype=CL:0002087!8.75e-45!119;CL:0002194!2.02e-40!63;CL:0000576!2.02e-40!63;CL:0000040!2.02e-40!63;CL:0000559!2.02e-40!63;CL:0002009!5.61e-39!65;CL:0000738!1.08e-36!140;CL:0002031!9.66e-36!124;CL:0000839!9.99e-36!70;CL:0002057!1.10e-35!42;CL:0000557!3.94e-35!71;CL:0000860!6.10e-33!45;CL:0000766!2.20e-32!76;CL:0000037!3.87e-28!172;CL:0000566!3.87e-28!172;CL:0002032!2.39e-26!165;CL:0000837!2.39e-26!165;CL:0000988!4.43e-26!182;CL:0000763!8.21e-20!112;CL:0000049!8.21e-20!112;CL:0000945!4.77e-14!24;CL:0000826!4.77e-14!24;CL:0000840!2.07e-10!5;CL:0001029!2.07e-10!5;CL:0000134!1.11e-08!358;CL:0002320!2.43e-08!365;CL:0000219!8.68e-08!390;CL:0000990!6.01e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.18e-34;1!CL:0000819;2.18e-34;1!CL:0000860;4.28e-15;33!CL:0002057;4.28e-15;33!CL:0000473;9.55e-11;39!CL:0000234;9.55e-11;39!CL:0000576;2.60e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.58e-34,1;CL:0000785,6.48e-18,2;CL:0000955,6.48e-18,2;CL:0000818,6.48e-18,2;CL:0000954,6.48e-18,2;CL:0000816,6.48e-18,2;CL:0000860,4.27e-13,42;CL:0002057,4.27e-13,42;CL:0000817,2.07e-12,3;CL:0000473,1.56e-11,48;CL:0000234,1.56e-11,48;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0002194,2.45e-09,59;CL:0000576,2.45e-09,59;CL:0000040,2.45e-09,59;CL:0000559,2.45e-09,59;CL:0000738,4.36e-09,136;CL:0002009,4.72e-09,61;CL:0000839,2.05e-08,66;CL:0000557,2.68e-08,67;CL:0000766,9.19e-08,72;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;5.96e-18;2!CL:0002057;9.15e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.18e-34;1!DOID:8675;2.18e-34;1!DOID:0060058;2.49e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.58e-34,1;DOID:8675,2.58e-34,1;DOID:0060058,2.49e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.97e-30!80;UBERON:0002390!2.80e-28!102;UBERON:0003061!2.80e-28!102;UBERON:0001474!7.67e-28!86;UBERON:0002193!6.56e-27!112;UBERON:0004765!1.05e-22!101;UBERON:0001434!1.05e-22!101;UBERON:0002405!2.16e-22!115;UBERON:0002204!4.28e-11!167;UBERON:0003081!1.72e-09!216;UBERON:0002384!1.53e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.20e-07,76;UBERON:0001474,6.96e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0.755751887377619,0.242584061187816,1.16214518452842,0.822335776043652,0,0.575384784644301,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,0,0.752969358170419,1.36453075028923,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0.502497330513487,1.5644487552606,1.08594422352558,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00700268137233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9230223611415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@AK124103 | |||
}} |
Revision as of 13:59, 21 January 2014
Short description: | p3@AK124103 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK124103_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_AK124103_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.58e-34 | 1 |
mature B cell | 6.48e-18 | 2 |
pre-B-II cell | 6.48e-18 | 2 |
transitional stage B cell | 6.48e-18 | 2 |
small pre-B-II cell | 6.48e-18 | 2 |
immature B cell | 6.48e-18 | 2 |
classical monocyte | 4.27e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-13 | 42 |
precursor B cell | 2.07e-12 | 3 |
defensive cell | 1.56e-11 | 48 |
phagocyte | 1.56e-11 | 48 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
monopoietic cell | 2.45e-09 | 59 |
monocyte | 2.45e-09 | 59 |
monoblast | 2.45e-09 | 59 |
promonocyte | 2.45e-09 | 59 |
leukocyte | 4.36e-09 | 136 |
macrophage dendritic cell progenitor | 4.72e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.05e-08 | 66 |
granulocyte monocyte progenitor cell | 2.68e-08 | 67 |
myeloid leukocyte | 9.19e-08 | 72 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.20e-07 | 76 |
bone element | 6.96e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.58e-34 | 1 |
lymphosarcoma | 2.58e-34 | 1 |
lymphoma | 2.49e-14 | 10 |