FFCP PHASE1:Hg19::chr2:170335297..170335305,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=129880 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=970 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N3I7 | |||
|association_with_transcript=-382bp_to_ENST00000295240_5end | |||
|coexpression_cluster_id=C1500 | |||
|description=CAGE_peak_2_at_BBS5_5end | |||
|id=chr2:170335297..170335305,+ | |||
|ontology_enrichment_celltype=CL:0000148!4.36e-12!10;CL:0000541!4.36e-12!10;CL:0002619!9.21e-09!3;CL:0000235!1.49e-08!10;CL:0002567!1.50e-08!3;CL:0000147!3.03e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.40e-48;10!CL:0000147;2.17e-34;14!CL:0002619;2.80e-31;3!CL:0002567;2.24e-30;3!CL:0000235;4.73e-27;6!CL:0000710;6.61e-24;20!CL:0000075;1.50e-17;27!CL:0002077;2.66e-12;34!CL:0002566;2.68e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.24e-48,10;CL:0000541,2.24e-48,10;CL:0000147,2.06e-34,14;CL:0002619,2.66e-31,3;CL:0002567,2.03e-30,3;CL:0000235,4.90e-27,6;CL:0000710,6.39e-24,20;CL:0000075,1.47e-17,27;CL:0002077,8.25e-14,34;CL:0002566,2.68e-11,1;CL:0000333,8.92e-11,41;CL:0002194,1.40e-07,59;CL:0000576,1.40e-07,59;CL:0000040,1.40e-07,59;CL:0000559,1.40e-07,59;CL:0000133,2.19e-07,59;CL:0002009,2.59e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.67e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.67e-11;1!UBERON:0001153;4.67e-11;1!UBERON:0009854;4.67e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.43e-11,1;UBERON:0001153,5.43e-11,1;UBERON:0001045,5.43e-11,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5392665574358,12.9557466407592,13.9090806522461,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.696518949197069,0.26591592103773,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,4.18568910348575,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,5.65131259200304,6.11181480893244,11.7217447210047,1.71072446022705,3.90744472272629,22.5257293382938,42.016485596695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,13.5609414686674,6.32501818449095,0,0,0,0,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,1.10513566212459,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0.606596470166591,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,7.50503713854892,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,0.580120991762195,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.839655827868079,0.620747142958579,0,0,0.202117188958219,0.217716747896961,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p2@BBS5 | |||
}} |
Revision as of 06:30, 21 January 2014
Short description: | p2@BBS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BBS5_5end |
Coexpression cluster: | C1500_Melanocyte_Monocytederived_CD14_melanoma_retina_Macrophage_Mast |
Association with transcript: | -382bp_to_ENST00000295240_5end |
EntrezGene: | BBS5 |
HGNC: | 970 |
UniProt: | Q8N3I7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.24e-48 | 10 |
melanoblast | 2.24e-48 | 10 |
pigment cell | 2.06e-34 | 14 |
adult endothelial progenitor cell | 2.66e-31 | 3 |
light melanocyte | 2.03e-30 | 3 |
macrophage | 4.90e-27 | 6 |
neurecto-epithelial cell | 6.39e-24 | 20 |
columnar/cuboidal epithelial cell | 1.47e-17 | 27 |
ecto-epithelial cell | 8.25e-14 | 34 |
dark melanocyte | 2.68e-11 | 1 |
migratory neural crest cell | 8.92e-11 | 41 |
monopoietic cell | 1.40e-07 | 59 |
monocyte | 1.40e-07 | 59 |
monoblast | 1.40e-07 | 59 |
promonocyte | 1.40e-07 | 59 |
neurectodermal cell | 2.19e-07 | 59 |
macrophage dendritic cell progenitor | 2.59e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.43e-11 | 1 |
caecum | 5.43e-11 | 1 |
midgut | 5.43e-11 | 1 |