FFCP PHASE1:Hg19::chr2:37551627..37551638,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23683 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9408 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-114bp_to_ENST00000477132_5end | |||
|description=CAGE_peak_16_at_PRKD3_5end | |||
|id=chr2:37551627..37551638,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.78e-29;1!CL:0000148;2.51e-12;10!CL:0000632;8.99e-11;3!CL:0000147;4.38e-09;14!CL:0000149;2.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.33e-29,1;CL:0000148,2.12e-12,10;CL:0000541,2.12e-12,10;CL:0000632,8.99e-11,3;CL:0000147,3.88e-09,14;CL:0000149,1.82e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.78e-15;2!DOID:5409;2.11e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.15e-15,2;DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.78e-29;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.16e-29,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0.860413786167011,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,1.65094525159639,0,0,0,0,1.8020583470635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732555718546747,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0.552567831062295,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0,0.482259445395058,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,1.99825733481477,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,1.24240690242856,0,0.150962843566674,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@PRKD3 | |||
}} |
Revision as of 02:36, 21 January 2014
Short description: | p16@PRKD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PRKD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_ENST00000477132_5end |
EntrezGene: | PRKD3 |
HGNC: | 9408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.33e-29 | 1 |
melanocyte | 2.12e-12 | 10 |
melanoblast | 2.12e-12 | 10 |
hepatic stellate cell | 8.99e-11 | 3 |
pigment cell | 3.88e-09 | 14 |
visual pigment cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.16e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.15e-15 | 2 |
lung small cell carcinoma | 2.26e-08 | 4 |