FFCP PHASE1:Mm9::chr11:120521845..120521871,-: Difference between revisions
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{{FFCP|EntrezGene=77583|HGNC=|UniProt=Q8R116|association_with_transcript=48bp_to_ENSMUST00000106177_5end|description=CAGE_peak_3_at_Notum_5end|id=chr11:120521845..120521871,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-11,5;CL:0000128,7.07e-09,6;CL:0000126,7.07e-09,6;CL:0000127,7.07e-09,6;CL:0002605,1.82e-07,2;CL:0002604,1.82e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.09e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.61e-24,22;UBERON:0007499,8.61e-24,22;UBERON:0006925,8.61e-24,22;UBERON:0009497,8.61e-24,22;UBERON:0000015,8.61e-24,22;UBERON:0002423,8.61e-24,22;UBERON:0006235,8.61e-24,22;UBERON:0008835,8.61e-24,22;UBERON:0003894,8.61e-24,22;UBERON:0004161,8.61e-24,22;UBERON:0008836,8.61e-24,22;UBERON:0009854,1.22e-22,23;UBERON:0009856,1.22e-22,23;UBERON:0002365,1.28e-20,25;UBERON:0002330,1.28e-20,25;UBERON:0005172,2.36e-12,49;UBERON:0005173,2.36e-12,49;UBERON:0002417,2.36e-12,49;UBERON:0000916,2.36e-12,49;UBERON:0003104,3.07e-12,61;UBERON:0009142,3.07e-12,61;UBERON:0005256,6.32e-12,45;UBERON:0003914,2.69e-11,47;UBERON:0009569,1.19e-09,66;UBERON:0005177,1.15e-08,79;UBERON:0003929,6.21e-08,55;UBERON:0000490,2.72e-07,66;UBERON:0002100,3.48e-07,90;UBERON:0002368,4.66e-07,60;UBERON:0005911,8.19e-07,69|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,6.59058548203415,2.52758868796568,4.19959264876088,4.31257693094915,0,0,0,0,0,0.515672092277442,0,0,0,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0.559198337475902,0,0,0,5.16254326188832,2.03991400112325,9.71465744948071,5.84798775702902,11.6486990645307,2.10666630197628,0,0,0,0.14084341977668,0,0,0,0,0,0,5.25245846707676,0,0.742210695324124,0,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,1.2220723662038,0.373220911830279,0,0,0,0,0.180062129805349,0.60281927134286,0.0680364991513279,0,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,0,0.411564272815887,4.17971960318836,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0.146199987425332,0,0,0,0.308713837137853,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.49095073923223,0.0632365371242573,0.295220295959204,0.627994911365499,1.23397163921801,19.862326014839,0.166845105716094,0,0,0,0,0,0,0,1.64736847912849,7.18841032636773,5.20997326735905,14.0416952901552,21.2166257475574,10.9432422248366,8.68398338454061,0.369506380333209,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.714130922658041,1.36593553500459,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0.890328018336276,2.76907830901079,0.989820737835213,0,0,0,0,0,0,0,0,0.356497378384721,0,2.10837217149998,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0,0,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0,0.429742108096597,0.57386499620653,0.441182838239031,0.927471342481686|short_description=p3@Notum}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77583 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R116 | |||
|association_with_transcript=48bp_to_ENSMUST00000106177_5end | |||
|cluster_id=chr11:120521845..120521871,- | |||
|description=CAGE_peak_3_at_Notum_5end | |||
|id=chr11:120521845..120521871,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-11,5;CL:0000128,7.07e-09,6;CL:0000126,7.07e-09,6;CL:0000127,7.07e-09,6;CL:0002605,1.82e-07,2;CL:0002604,1.82e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.09e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.61e-24,22;UBERON:0007499,8.61e-24,22;UBERON:0006925,8.61e-24,22;UBERON:0009497,8.61e-24,22;UBERON:0000015,8.61e-24,22;UBERON:0002423,8.61e-24,22;UBERON:0006235,8.61e-24,22;UBERON:0008835,8.61e-24,22;UBERON:0003894,8.61e-24,22;UBERON:0004161,8.61e-24,22;UBERON:0008836,8.61e-24,22;UBERON:0009854,1.22e-22,23;UBERON:0009856,1.22e-22,23;UBERON:0002365,1.28e-20,25;UBERON:0002330,1.28e-20,25;UBERON:0005172,2.36e-12,49;UBERON:0005173,2.36e-12,49;UBERON:0002417,2.36e-12,49;UBERON:0000916,2.36e-12,49;UBERON:0003104,3.07e-12,61;UBERON:0009142,3.07e-12,61;UBERON:0005256,6.32e-12,45;UBERON:0003914,2.69e-11,47;UBERON:0009569,1.19e-09,66;UBERON:0005177,1.15e-08,79;UBERON:0003929,6.21e-08,55;UBERON:0000490,2.72e-07,66;UBERON:0002100,3.48e-07,90;UBERON:0002368,4.66e-07,60;UBERON:0005911,8.19e-07,69 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,6.59058548203415,2.52758868796568,4.19959264876088,4.31257693094915,0,0,0,0,0,0.515672092277442,0,0,0,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0.559198337475902,0,0,0,5.16254326188832,2.03991400112325,9.71465744948071,5.84798775702902,11.6486990645307,2.10666630197628,0,0,0,0.14084341977668,0,0,0,0,0,0,5.25245846707676,0,0.742210695324124,0,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,1.2220723662038,0.373220911830279,0,0,0,0,0.180062129805349,0.60281927134286,0.0680364991513279,0,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,0,0.411564272815887,4.17971960318836,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0.146199987425332,0,0,0,0.308713837137853,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.49095073923223,0.0632365371242573,0.295220295959204,0.627994911365499,1.23397163921801,19.862326014839,0.166845105716094,0,0,0,0,0,0,0,1.64736847912849,7.18841032636773,5.20997326735905,14.0416952901552,21.2166257475574,10.9432422248366,8.68398338454061,0.369506380333209,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.714130922658041,1.36593553500459,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0.890328018336276,2.76907830901079,0.989820737835213,0,0,0,0,0,0,0,0,0.356497378384721,0,2.10837217149998,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0,0,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0,0.429742108096597,0.57386499620653,0.441182838239031,0.927471342481686 | |||
|short_description=p3@Notum | |||
}} |
Revision as of 15:20, 5 August 2015
Short description: | p3@Notum |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Notum_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENSMUST00000106177_5end |
EntrezGene: | 77583 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.10e-11 | 5 |
oligodendrocyte | 7.07e-09 | 6 |
macroglial cell | 7.07e-09 | 6 |
astrocyte | 7.07e-09 | 6 |
astrocyte of the cerebral cortex | 1.82e-07 | 2 |
astrocyte of the hippocampus | 1.82e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 8.61e-24 | 22 |
epithelial sac | 8.61e-24 | 22 |
digestive gland | 8.61e-24 | 22 |
epithelium of foregut-midgut junction | 8.61e-24 | 22 |
anatomical boundary | 8.61e-24 | 22 |
hepatobiliary system | 8.61e-24 | 22 |
foregut-midgut junction | 8.61e-24 | 22 |
hepatic diverticulum | 8.61e-24 | 22 |
liver primordium | 8.61e-24 | 22 |
septum transversum | 8.61e-24 | 22 |
liver bud | 8.61e-24 | 22 |
digestive tract diverticulum | 1.22e-22 | 23 |
sac | 1.22e-22 | 23 |
exocrine gland | 1.28e-20 | 25 |
exocrine system | 1.28e-20 | 25 |
abdomen element | 2.36e-12 | 49 |
abdominal segment element | 2.36e-12 | 49 |
abdominal segment of trunk | 2.36e-12 | 49 |
abdomen | 2.36e-12 | 49 |
mesenchyme | 3.07e-12 | 61 |
entire embryonic mesenchyme | 3.07e-12 | 61 |
trunk mesenchyme | 6.32e-12 | 45 |
epithelial tube | 2.69e-11 | 47 |
subdivision of trunk | 1.19e-09 | 66 |
trunk region element | 1.15e-08 | 79 |
gut epithelium | 6.21e-08 | 55 |
unilaminar epithelium | 2.72e-07 | 66 |
trunk | 3.48e-07 | 90 |
endocrine gland | 4.66e-07 | 60 |
endo-epithelium | 8.19e-07 | 69 |