FFCP PHASE1:Hg19::chr3:142607822..142607869,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8739 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000461818_5end | |||
|description=CAGE_peak_2_at_PCOLCE2_5end | |||
|id=chr3:142607822..142607869,- | |||
|ontology_enrichment_celltype=CL:0000055!8.24e-14!180;CL:0000136!6.69e-10!15;CL:0000325!6.95e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.72e-10;13!CL:0002334;6.97e-07;12!CL:0000359;7.28e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.24e-12,15;CL:0002334,6.43e-07,12;CL:0000359,7.40e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.21e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.50e-09!27;UBERON:0004573!5.99e-08!33;UBERON:0004571!5.99e-08!33;UBERON:0000948!1.33e-07!24;UBERON:0005498!1.33e-07!24;UBERON:0004140!1.33e-07!24;UBERON:0009881!1.33e-07!24;UBERON:0004141!1.33e-07!24;UBERON:0003084!1.33e-07!24;UBERON:0007005!1.33e-07!24;UBERON:0004139!1.33e-07!24;UBERON:0004291!1.33e-07!24;UBERON:0001637!2.49e-07!42;UBERON:0003509!2.49e-07!42;UBERON:0004572!2.49e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.75e-09;25!UBERON:0004573;1.07e-08;33!UBERON:0004571;1.07e-08;33!UBERON:0000948;9.64e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,9.08e-10,33;UBERON:0004571,9.08e-10,33;UBERON:0007100,1.11e-08,27;UBERON:0001637,4.13e-08,42;UBERON:0003509,4.13e-08,42;UBERON:0004572,4.13e-08,42;UBERON:0004872,3.33e-07,83;UBERON:0004797,5.93e-07,7;UBERON:0000948,9.69e-07,24;UBERON:0005498,9.69e-07,24;UBERON:0004140,9.69e-07,24;UBERON:0009881,9.69e-07,24;UBERON:0004141,9.69e-07,24;UBERON:0003084,9.69e-07,24;UBERON:0007005,9.69e-07,24;UBERON:0004139,9.69e-07,24;UBERON:0004291,9.69e-07,24 | |||
|phase1_expression=8.72056220498672,15.8434387679328,8.59821864985424,5.00366491765652,14.3027550216732,3.48935409640147,5.06599756336621,10.7392378482561,9.14149698699435,0.491467873003018,0,0,0,0.74259811776028,1.32558950291166,0,1.20538905604795,2.19093027116212,0.975865597581014,0.984968464614303,0.204000691244253,0.313454721478088,0.572471974262113,1.91624195102038,0.376627918784408,0.152826811495903,0,0.0787107813136792,0,0.383829398097213,0,0.919421224478927,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0.639312809217652,24.5778623621505,9.02408239144601,17.6712753132205,63.6228757640879,218.499056765883,0.661743720148475,1.55210578223795,1.31752178539689,1.76821751921912,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,3.24056779152704,0,0,0,0,0,0,0,0,0,6.46063537203914,13.54946474811,9.66587019936497,23.8074395221515,9.930714701554,5.04609840128076,1.06748995729705,1.48000529050296,1.24484414159907,0.538842688278752,0.490385709340376,0,0,0.468642863667593,0,0,1.19558944441441,0.704606991862589,0.485618833104395,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0.841680569770331,0.250237039743928,0,1.31693286264251,0.919463387397059,0.45071417671979,0.453728732640084,1.97328599257748,1.06778694409284,2.33125091275518,10.8032794590385,2.88547081867629,7.21393512127762,11.7253619488902,20.928265197917,16.174542856759,1.26216887122057,2.02509777013059,5.01102776138317,7.4552014428489,4.43309232201617,1.86516651541536,0.386521706326594,0.272746120590835,0.286804595389004,1.21973706129595,3.97589304964456,2.44007280025989,1.7622379352613,2.01856680700503,3.28479623168247,0,0,0,0,0,2.24782920075703,2.52877035117153,3.37415441836875,2.42646740011267,3.92182999366331,4.50814176311084,3.64044532032444,2.5508790466295,3.46272441251751,0,0,0,0,3.80265104465493,7.86261773342101,5.90789906681404,0,0,4.11762744716461,0.439001141634502,0,0.301586917234893,0.0925884451585296,0.325808305310325,1.03993478527958,1.44331342025273,0.579652024875384,1.52631302506568,0,0,0,0,0,0,0.234004265139238,0.445893486866185,1.87467667973554,0.335964256397719,0,0.626909658919938,0.290633938513962,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0,0.317489471460845,1.52795370223311,0,5.13217338068116,0.616964956219941,0,0.285826432630578,0.112131084345361,0.43596006883328,0.2933531432838,0.129271715757778,0,1.690605505112,0,0,0.257207374262142,0,0,0,0,0,1.30294473717494,0,0,6.93310567237048,4.35766729300147,2.39935178836937,0,0,0,3.11512312139057,1.14861935834114,15.690059554479,20.993289466799,7.60262393436419,1.79060963239896,0,0,0,0,4.8277978602268,1.30139853857622,0,1.67516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0.535286966391485,0.473107245101804,0.702848489956279,0.601892199455438,0,2.0694614258501,1.99267679560631,1.10621501125022,0,0,0,0,0.215714200818617,0,0,0,1.5119514666484,10.4205279283886,7.51963669111506,7.85848264412606,6.15067916427365,4.09365799253363,2.57366273829772,5.93672265779964,1.85051632563187,8.5229628150301,6.07740954502188,2.07701771673448,5.22946703069817,0.241718899183244,1.80455823272956,0.460404944679482,1.14814448164607,0.364182336013434,1.44236856455367,0,0.539107359730903,0,1.46139224653261,0.73886140225013,0,0,0.215915916102139,0,0,1.00337954770971,0.764628819135115,0,1.34324852833307,0,0.261435451024901,3.84675187674584,0.328014645699706,0.976135183992909,8.44936295511323,8.24125183365091,8.41596899189997,0.574265537996172,0,8.03419649220798,0.676695028044854,0.308097234229289,1.07452572308291,0.275673144969061,0.537101224341368,0.870100163485371,0.681813019328807,0.0890320356467374,0,0,0.510450849978337,0,2.78907329578371,26.4442371337738,7.6674099717666,5.5446044431696,9.04920251538937,11.3091288969759,1.11194531462352,9.8756171851974,0,0,0,0.511795582622668,0,2.22742273548156,8.63443504219153,0,0,0.117812402345686,10.5134890418124,7.92551605865041,4.63384301862879,0,20.9593601082905,3.16950440270266,0.272999822815972,0.282810863907425,24.8617856564534,6.61638412255349,18.5762913067542,14.9073300986279,1.15755106853338,0.655894752046633,0.202910376962704,4.3375289733965,4.50712964051586,0.430234056612155,0.0982490410131212,0.35667105148125,0,69.0321967423362,21.7334629353535,0,0,0,0,0,8.47294206991012,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0.79312517629427,1.28188885352968,0,6.37104561550682,0,2.30830740762312,0,0.956557636372934,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0.851692475380653,0,0.614481528616916,0.223676107892416,0,0.781552381608161,0,0,0.270455678475983,0,1.4098700508785,0,6.59286806723523,0.485442086998054,0,0.568272293612826,0,0,0,0,1.1253553312841,2.89402633059555,8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| |||
|short_description=p2@PCOLCE2 | |||
}} |
Revision as of 21:45, 21 January 2014
Short description: | p2@PCOLCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCOLCE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461818_5end |
EntrezGene: | PCOLCE2 |
HGNC: | 8739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.24e-12 | 15 |
preadipocyte | 6.43e-07 | 12 |
vascular associated smooth muscle cell | 7.40e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 9.08e-10 | 33 |
systemic arterial system | 9.08e-10 | 33 |
primary circulatory organ | 1.11e-08 | 27 |
artery | 4.13e-08 | 42 |
arterial blood vessel | 4.13e-08 | 42 |
arterial system | 4.13e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 3.33e-07 | 83 |
blood vessel layer | 5.93e-07 | 7 |
heart | 9.69e-07 | 24 |
primitive heart tube | 9.69e-07 | 24 |
primary heart field | 9.69e-07 | 24 |
anterior lateral plate mesoderm | 9.69e-07 | 24 |
heart tube | 9.69e-07 | 24 |
heart primordium | 9.69e-07 | 24 |
cardiac mesoderm | 9.69e-07 | 24 |
cardiogenic plate | 9.69e-07 | 24 |
heart rudiment | 9.69e-07 | 24 |