FFCP PHASE1:Hg19::chr3:168802151..168802153,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr3:168802151..168802153,- | |||
|id=chr3:168802151..168802153,- | |||
|ontology_enrichment_celltype=CL:0000064!1.91e-17!3;CL:0005012!1.91e-17!3;CL:0000067!1.91e-17!3;CL:0002304!1.91e-17!3;CL:0000159!7.02e-13!2;CL:0002564!1.66e-08!3;CL:0000313!2.09e-07!1;CL:0000319!3.78e-07!1;CL:0002379!4.25e-07!1;CL:0000342!6.38e-07!1;CL:0002565!6.38e-07!1;CL:0000075!6.73e-07!27;CL:0000710!8.42e-07!20;CL:0000066!8.86e-07!254;CL:0002557!8.98e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.42e-195;1!CL:0000159;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.42e-195,1;CL:0000159,1.55e-98,2;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease=DOID:2152!2.09e-07!1;DOID:3030!3.78e-07!1;DOID:3620!4.25e-07!1;DOID:3565!4.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.42e-195;1!DOID:2394;1.43e-15;14!DOID:299;2.15e-09;25!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.42e-195,1;DOID:2394,1.43e-15,14;DOID:299,2.15e-09,25;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.20e-22!4;UBERON:0001778!1.91e-17!3;UBERON:0001775!1.91e-17!3;UBERON:0002203!3.63e-15!6;UBERON:0001768!3.63e-15!6;UBERON:0007625!1.63e-12!11;UBERON:0001801!8.74e-10!14;UBERON:0002242!1.66e-08!3;UBERON:0003068!1.66e-08!3;UBERON:0002328!1.66e-08!3;UBERON:0004880!1.66e-08!3;UBERON:0002200!2.51e-08!11;UBERON:0006876!2.51e-08!11;UBERON:0000020!2.76e-08!23;UBERON:0001032!6.46e-08!24;UBERON:0004456!6.46e-08!24;UBERON:0004911!2.09e-07!1;UBERON:0002426!2.22e-07!1;UBERON:0003831!2.22e-07!1;UBERON:0003898!2.22e-07!1;UBERON:0004830!2.22e-07!1;UBERON:0001774!2.22e-07!1;UBERON:0003830!2.22e-07!1;UBERON:0005175!2.22e-07!1;UBERON:0003897!2.22e-07!1;UBERON:0001103!2.22e-07!1;UBERON:0010084!2.22e-07!1;UBERON:0001000!2.36e-07!1;UBERON:0005352!2.36e-07!1;UBERON:0000019!3.83e-07!19;UBERON:0000047!3.83e-07!19;UBERON:0004088!3.83e-07!19;UBERON:0003072!3.83e-07!19;UBERON:0003071!3.83e-07!19;UBERON:0004128!3.83e-07!19;UBERON:0002146!4.51e-07!1;UBERON:0005623!4.51e-07!1;UBERON:0002506!6.38e-07!1;UBERON:0001769!6.38e-07!1;UBERON:0000970!8.98e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.42e-195;1!UBERON:0004909;1.55e-98;2!UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.42e-195,1;UBERON:0004909,1.55e-98,2;UBERON:0000992,1.21e-16,13;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78968690876468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:168802151..168802153,- | |||
}} | |||
Revision as of 22:28, 21 January 2014
| Short description: | p@chr3:168802151..168802153, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:168802151..168802153, - |
| Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| serous secreting cell | 5.42e-195 | 1 |
| seromucus secreting cell | 1.55e-98 | 2 |
| secretory cell | 5.81e-07 | 36 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of female gonad | 5.42e-195 | 1 |
| epithelium of gonad | 1.55e-98 | 2 |
| female gonad | 1.21e-16 | 13 |
| gonad | 6.74e-11 | 21 |
| indifferent external genitalia | 6.74e-11 | 21 |
| indifferent gonad | 6.74e-11 | 21 |
| gonad primordium | 6.74e-11 | 21 |
| external genitalia | 1.80e-10 | 22 |
| female reproductive organ | 8.21e-07 | 37 |
| female reproductive system | 8.21e-07 | 37 |
| Ontology term | p-value | n |
|---|---|---|
| ovary epithelial cancer | 5.42e-195 | 1 |
| ovarian cancer | 1.43e-15 | 14 |
| adenocarcinoma | 2.15e-09 | 25 |
| female reproductive organ cancer | 8.32e-09 | 27 |
| reproductive organ cancer | 2.67e-08 | 29 |
