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FFCP PHASE1:Mm9::chr12:70473099..70473159,+: Difference between revisions

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{{FFCP|EntrezGene=11845|HGNC=|MCL_coexpression_id=24|UniProt=P62331,Q3U0D7|association_with_transcript=0bp_to_ENSMUST00000050063,NM_007481,uc007nsj.1_5end|description=CAGE_peak_1_at_Arf6_5end|id=chr12:70473099..70473159,+|ontology_enrichment_celltype=CL:0000063!3.51e-14!66;CL:0000219!3.91e-10!54;CL:0002320!5.01e-09!46;CL:0000134!5.01e-09!46;CL:0000988!2.06e-08!32;CL:0002032!2.06e-08!32;CL:0000037!2.06e-08!32;CL:0000566!2.06e-08!32;CL:0000837!2.06e-08!32;CL:0002031!4.29e-07!25|ontology_enrichment_celltype_v019_2=CL:0000219,3.91e-10,54;CL:0002320,5.01e-09,46;CL:0000134,5.01e-09,46;CL:0000988,2.06e-08,32;CL:0002032,2.06e-08,32;CL:0000037,2.06e-08,32;CL:0000837,2.06e-08,32;CL:0002031,4.29e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.89e-16!130;UBERON:0000925!4.89e-16!130;UBERON:0006595!4.89e-16!130;UBERON:0001007!1.20e-15!128;UBERON:0001555!1.20e-15!128;UBERON:0007026!1.20e-15!128;UBERON:0004921!1.33e-14!126;UBERON:0004185!1.33e-14!126;UBERON:0004923!7.91e-10!24;UBERON:0005409!9.97e-10!59;UBERON:0000344!1.57e-09!15;UBERON:0002384!5.01e-09!46;UBERON:0000160!9.19e-09!43;UBERON:0002405!1.09e-08!70;UBERON:0002193!1.56e-08!48;UBERON:0001242!2.27e-08!13;UBERON:0000060!2.27e-08!13;UBERON:0001262!2.27e-08!13;UBERON:0004786!2.27e-08!13;UBERON:0002390!3.46e-08!45;UBERON:0003061!3.46e-08!45;UBERON:0005911!2.30e-07!69;UBERON:0000490!4.04e-07!66;UBERON:0003929!5.31e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.66e-15,118;UBERON:0000925,1.66e-15,118;UBERON:0006595,1.66e-15,118;UBERON:0001007,3.90e-15,116;UBERON:0001555,3.90e-15,116;UBERON:0007026,3.90e-15,116;UBERON:0004921,4.22e-14,114;UBERON:0005409,5.56e-10,47;UBERON:0004923,7.91e-10,24;UBERON:0000344,1.57e-09,15;UBERON:0000160,1.80e-09,31;UBERON:0002384,5.01e-09,46;UBERON:0002193,1.56e-08,48;UBERON:0002405,1.56e-08,48;UBERON:0001242,2.27e-08,13;UBERON:0001262,2.27e-08,13;UBERON:0004786,2.27e-08,13;UBERON:0002390,3.46e-08,45;UBERON:0003061,3.46e-08,45;UBERON:0005911,2.30e-07,69;UBERON:0000490,4.04e-07,66;UBERON:0003929,5.31e-07,55|phase1_expression=70.3053438790046,545.797537547961,531.894110846368,535.966582435703,567.514862029211,152.938016711732,124.28192479682,115.565374480211,263.697276590072,290.474077165594,114.202384806412,140.398999831792,87.6547737247773,103.156074854417,73.6172573612615,82.0024832928795,86.046111009762,99.528313170524,102.835825204304,95.0632820027588,45.5832035209734,56.297969330902,50.4115593038145,144.63315020524,152.098353347534,442.732844332681,272.672343568694,234.648172394933,229.5482907033,209.689067960262,175.388833928346,99.6998157331621,95.9501068631929,31.6963362030877,82.9004148686158,89.2680045575104,88.2011619053435,130.163337159178,114.074960300475,104.181225050786,117.646297606203,136.609096991689,139.341471319941,32.7331726736501,28.5882946039031,40.3802854755699,106.405222831333,69.1139745726015,58.216838424635,57.9401099241365,65.5136453206697,81.9389616880338,236.237909329293,185.692708354904,130.068300268134,84.1238355837547,66.1892246258528,64.4590115346803,40.8679250936388,41.7902873624906,32.9592329823213,89.79380099832,68.4756993005577,143.983954765024,147.341088022479,169.094267357172,95.5724352553711,99.8967593836042,34.4249512864146,32.6714370762691,33.021018932167,39.9911378165325,34.0137553065485,34.4199145794021,39.2007976464587,47.7993769037211,39.6417171597799,36.3908913542785,39.6304855801108,37.4557057153751,43.2736554239398,40.6312429034273,41.039900853203,34.8912818219642,40.0331409175242,33.2930301585245,33.8844600301865,23.6727296198132,106.31957543979,82.1462858360759,34.204009666798,53.346280372846,119.674954732564,60.4467574634355,33.7883737072788,30.4658283226188,65.7279886216599,99.3608780630077,83.9108794867266,115.188701290371,73.9427953827573,44.9142670950112,45.8649431471962,71.1066703153331,59.5350362780839,63.8466860997248,59.6518845117444,91.6896554144052,37.0281173615456,57.595549957152,58.9850111004862,55.7171825311218,53.7334108606616,56.3702675666808,42.214345861718,59.5659642902662,101.349936771093,38.0296308699368,76.0765074676892,55.8095632318562,66.0316140196577,59.1547808824971,83.876292548155,36.8903804234549,32.2547928492721,143.822322082437,100.524889460467,110.98200523378,112.075940278443,42.8401228697793,26.0775343606617,43.4764058310511,34.7648640384553,33.243009452943,35.9473317088039,32.123770087416,56.7245256646262,58.3468692161336,48.7754923776992,46.5076501509107,42.6795052917668,52.1877777063984,44.1152218023106,41.7452345404931,38.1004395247436,35.3593867986185,45.3516346869088,31.0444044886819,58.2033580918674,44.8181409997732,41.8763675510198,60.7172178824382,45.3217016237725,70.3469376374776,57.4132160578162,48.7633953705308,88.4788616014676,84.1527656265119,95.1947722975235,41.8394060521714,42.6837429165595,35.6522881692809,37.4056682224632,35.6143259462801,35.7899701898718,41.1585082208222,48.2892122519315,46.3558409197663,50.355314073525,41.8627033401693,44.4257076311289,40.0587965545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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11845
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=uniprot:P62331,uniprot:Q3U0D7
|association_with_transcript=0bp_to_ENSMUST00000050063,NM_007481,uc007nsj.1_5end
|cluster_id=chr12:70473099..70473159,+
|description=CAGE_peak_1_at_Arf6_5end
|id=chr12:70473099..70473159,+
|ontology_enrichment_celltype=CL:0000063!3.51e-14!66;CL:0000219!3.91e-10!54;CL:0002320!5.01e-09!46;CL:0000134!5.01e-09!46;CL:0000988!2.06e-08!32;CL:0002032!2.06e-08!32;CL:0000037!2.06e-08!32;CL:0000566!2.06e-08!32;CL:0000837!2.06e-08!32;CL:0002031!4.29e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000219,3.91e-10,54;CL:0002320,5.01e-09,46;CL:0000134,5.01e-09,46;CL:0000988,2.06e-08,32;CL:0002032,2.06e-08,32;CL:0000037,2.06e-08,32;CL:0000837,2.06e-08,32;CL:0002031,4.29e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.89e-16!130;UBERON:0000925!4.89e-16!130;UBERON:0006595!4.89e-16!130;UBERON:0001007!1.20e-15!128;UBERON:0001555!1.20e-15!128;UBERON:0007026!1.20e-15!128;UBERON:0004921!1.33e-14!126;UBERON:0004185!1.33e-14!126;UBERON:0004923!7.91e-10!24;UBERON:0005409!9.97e-10!59;UBERON:0000344!1.57e-09!15;UBERON:0002384!5.01e-09!46;UBERON:0000160!9.19e-09!43;UBERON:0002405!1.09e-08!70;UBERON:0002193!1.56e-08!48;UBERON:0001242!2.27e-08!13;UBERON:0000060!2.27e-08!13;UBERON:0001262!2.27e-08!13;UBERON:0004786!2.27e-08!13;UBERON:0002390!3.46e-08!45;UBERON:0003061!3.46e-08!45;UBERON:0005911!2.30e-07!69;UBERON:0000490!4.04e-07!66;UBERON:0003929!5.31e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.66e-15,118;UBERON:0000925,1.66e-15,118;UBERON:0006595,1.66e-15,118;UBERON:0001007,3.90e-15,116;UBERON:0001555,3.90e-15,116;UBERON:0007026,3.90e-15,116;UBERON:0004921,4.22e-14,114;UBERON:0005409,5.56e-10,47;UBERON:0004923,7.91e-10,24;UBERON:0000344,1.57e-09,15;UBERON:0000160,1.80e-09,31;UBERON:0002384,5.01e-09,46;UBERON:0002193,1.56e-08,48;UBERON:0002405,1.56e-08,48;UBERON:0001242,2.27e-08,13;UBERON:0001262,2.27e-08,13;UBERON:0004786,2.27e-08,13;UBERON:0002390,3.46e-08,45;UBERON:0003061,3.46e-08,45;UBERON:0005911,2.30e-07,69;UBERON:0000490,4.04e-07,66;UBERON:0003929,5.31e-07,55
|phase1_expression=70.3053438790046,545.797537547961,531.894110846368,535.966582435703,567.514862029211,152.938016711732,124.28192479682,115.565374480211,263.697276590072,290.474077165594,114.202384806412,140.398999831792,87.6547737247773,103.156074854417,73.6172573612615,82.0024832928795,86.046111009762,99.528313170524,102.835825204304,95.0632820027588,45.5832035209734,56.297969330902,50.4115593038145,144.63315020524,152.098353347534,442.732844332681,272.672343568694,234.648172394933,229.5482907033,209.689067960262,175.388833928346,99.6998157331621,95.9501068631929,31.6963362030877,82.9004148686158,89.2680045575104,88.2011619053435,130.163337159178,114.074960300475,104.181225050786,117.646297606203,136.609096991689,139.341471319941,32.7331726736501,28.5882946039031,40.3802854755699,106.405222831333,69.1139745726015,58.216838424635,57.9401099241365,65.5136453206697,81.9389616880338,236.237909329293,185.692708354904,130.068300268134,84.1238355837547,66.1892246258528,64.4590115346803,40.8679250936388,41.7902873624906,32.9592329823213,89.79380099832,68.4756993005577,143.983954765024,147.341088022479,169.094267357172,95.5724352553711,99.8967593836042,34.4249512864146,32.6714370762691,33.021018932167,39.9911378165325,34.0137553065485,34.4199145794021,39.2007976464587,47.7993769037211,39.6417171597799,36.3908913542785,39.6304855801108,37.4557057153751,43.2736554239398,40.6312429034273,41.039900853203,34.8912818219642,40.0331409175242,33.2930301585245,33.8844600301865,23.6727296198132,106.31957543979,82.1462858360759,34.204009666798,53.346280372846,119.674954732564,60.4467574634355,33.7883737072788,30.4658283226188,65.7279886216599,99.3608780630077,83.9108794867266,115.188701290371,73.9427953827573,44.9142670950112,45.8649431471962,71.1066703153331,59.5350362780839,63.8466860997248,59.6518845117444,91.6896554144052,37.0281173615456,57.595549957152,58.9850111004862,55.7171825311218,53.7334108606616,56.3702675666808,42.214345861718,59.5659642902662,101.349936771093,38.0296308699368,76.0765074676892,55.8095632318562,66.0316140196577,59.1547808824971,83.876292548155,36.8903804234549,32.2547928492721,143.822322082437,100.524889460467,110.98200523378,112.075940278443,42.8401228697793,26.0775343606617,43.4764058310511,34.7648640384553,33.243009452943,35.9473317088039,32.123770087416,56.7245256646262,58.3468692161336,48.7754923776992,46.5076501509107,42.6795052917668,52.1877777063984,44.1152218023106,41.7452345404931,38.1004395247436,35.3593867986185,45.3516346869088,31.0444044886819,58.2033580918674,44.8181409997732,41.8763675510198,60.7172178824382,45.3217016237725,70.3469376374776,57.4132160578162,48.7633953705308,88.4788616014676,84.1527656265119,95.1947722975235,41.8394060521714,42.6837429165595,35.6522881692809,37.4056682224632,35.6143259462801,35.7899701898718,41.1585082208222,48.2892122519315,46.3558409197663,50.355314073525,41.8627033401693,44.4257076311289,40.0587965545411,42.5927223664638,34.7594624589363,26.49653351908,39.4124665412659,219.728490684226,135.927591265062,36.6855790920602,43.428257637902,49.8717075316501,48.6057294342256,55.1497548735278,81.987244854513,131.44455004783,84.3258648186936,86.4593118272927,75.4045029035962,90.4633364232717,94.3760379086933,104.394678089477,121.077894138655,51.020665356379,44.8996654556234,38.3206301288473,43.9886868145879,49.2639317405769,50.4977903210294,48.0597682144355,51.6635517928608,46.7856208967297,50.8396315357818,62.5515043153884,76.7487486294033,80.9823059866396,88.1459480548627,76.4782657634656,89.7179034278991,84.0265310878685,79.1164377989729,58.3686816390127,62.3254407936945,66.1333750025831,62.5196792083086,67.4001373927451,72.7427168487682,60.4569283568844,69.4718670763249,71.499484594476,48.8887842367851,50.8450726499121,52.1117413329828,51.866544871759,63.9873903427736,78.3163578514985,94.6398192110324,58.1673681751845,60.6813249637643,70.0006434406368,67.3478223481683,79.2624066764461,75.6514576381306,55.7927750575307,58.7418138524206,99.8281474228644,65.1210721279169,32.9128709474974,32.7020605592247,89.0166753395348,31.811336827751,25.871673992133,38.2629969410706,33.8214734440494,43.4923212273645,32.9742037641943,39.6307143104365,42.5051236758639,31.2713767965104,31.2277344577754,30.8468463764935,53.7952922939338,52.1732218745058,59.7795140827624,47.1814551701451,61.0627636363829,52.440617409476,52.3019753549019,49.4145308960453,59.3556804690353,70.0952137312155,77.5284879504663,59.2559979048334,53.4746067577082,80.5893732736331,91.7141894602489,69.1008139762852,35.405718998394,46.455762260078,48.3801477347502,46.2967995668239,38.8375111676579,40.3113527780679,49.3647061806363,45.3652774180753,67.3507802142849,79.0133624322049,62.1890082514993,57.710188529518,57.4813359037424,76.2958500341172,94.3041517624778,91.4264811579991,108.430871226304,35.7870832880284,87.6567618492984,49.9456220470998,59.4474432856774,77.0426989149186,84.3403385038725,88.9947093773373,126.463951915428,144.849753154986,146.768372180298,64.9176020250277,50.6137589729817,56.1161729270102,64.8032044930808,60.217429252167,62.4516932314068,58.3962619846274,73.3962686840983,91.8763356363944,119.893850294908,77.0460748227788,42.8406633399985,49.7890098326449,64.1978942973539,54.2518815479893,70.5212636188412,51.8695305256689,50.3462553790284,66.7948494249464,51.8005161463012,34.3049451572929,37.4439008135225,75.5266578301346,62.2366410940804,61.6265742988964,65.7399364267643,62.3012900922835,69.1411114638802,75.2423513995005,75.0262798046852,58.8634403197701,70.6437097691849,62.3105824145674,65.1993222148944,73.4096351715714,63.8147885911366,75.2744873602502,85.686578002389,80.2939016654807,75.2123081311072,46.9450713498223,76.5744499840822,68.3155558516899,101.610611683477,93.793983454613,32.1908550291728,31.302116082488,17.7597609166213,25.6061241692095,38.364621107156,22.661816921691,26.3258775090404,22.9663813644352,25.3759749031155,31.583379016861,53.7618460486035,52.2722584155351,53.439618601044,52.9972643208881,63.3031751136507,64.712914974405,44.449345560323,43.4733970774067,50.384315905915,43.4639204233732,47.6541083793651,45.4589482740444,48.1317348395196,53.5250274104707,49.6242451776499,50.0108375847227,49.714375830343,49.3847604387085,47.3898785923803,44.454073880588,37.3727485100103,41.7068144474443,47.6872379894642,42.8771929065369,50.5367372830325,47.2995658114472,51.7686163229946,35.7774807555466,45.222769910672,40.9633858310149,49.5894375759048,48.5627098111528,34.7846386694236,49.1149786559512,55.3641973515876,68.9477195108731,63.1615342802603,60.1638951335235,49.9262546699681,61.5450059343448,51.0109238364927
|short_description=p1@Arf6
}}

Revision as of 04:12, 5 August 2015

Short description:p1@Arf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arf6_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000050063, NM_007481, uc007nsj.1_5end
EntrezGene:11845
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Arf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G770.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5545.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6531.89
CD326+ enterocyte, pool1.CNhs13542.11848-124I3535.97
CD326+ enterocyte, pool2.CNhs13197.11849-124I4567.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7152.94
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8124.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9115.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7263.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2290.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6114.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1140.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E487.65
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8103.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A173.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A382.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A586.05
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A299.53
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4102.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A695.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H256.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I950.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1144.63
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2152.10
GP2+ M cell, pool1.CNhs13228.11845-124H9442.73
GP2+ M cell, pool2.CNhs13231.11846-124I1272.67
GP2+ M cell, pool3.CNhs13240.11847-124I2234.65
Ileum epithelium, pool1.CNhs13199.10252-104B9229.55
Ileum epithelium, pool2.CNhs13232.10253-104C1209.69
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8175.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I399.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G695.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F582.90
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F689.27
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F788.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8130.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1114.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3104.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9117.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2136.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4139.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B340.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7106.41
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C269.11
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B858.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C357.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C465.51
Mouse Astrocytes, donor3.CNhs12107.11633-122C481.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2236.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9185.69
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1130.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C184.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E166.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C564.46
Mouse Granule cells, donor1.CNhs12131.11713-123C340.87
Mouse Granule cells, donor2.CNhs12357.11731-123E341.79
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C689.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D168.48
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7143.98
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7147.34
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2169.09
Mouse Microglia, donor1.CNhs12629.11718-123C895.57
Mouse Microglia, donor2.CNhs12634.11736-123E899.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D534.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F239.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D647.80
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.63
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D437.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F443.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E441.04
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.67
Mouse Schwann, donor1.CNhs12507.11728-123D9106.32
Mouse Schwann, donor2.CNhs12573.11746-123F982.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F753.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C4119.67
Mouse hepatocyte, donor3.CNhs12615.11637-122C860.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A765.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I799.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E383.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8115.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G673.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H144.91
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I845.86
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G159.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G263.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G359.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B691.69
accessory axillary lymph node, adult.CNhs10475.1063-29H937.03
adrenal gland, adult.CNhs10508.49-24D757.60
adrenal gland, embryo E14.CNhs11038.406-44C558.99
adrenal gland, embryo E16.CNhs11004.1254-43D655.72
adrenal gland, embryo E17.CNhs11043.1263-45I153.73
adrenal gland, embryo E18.CNhs11026.1262-18F556.37
adrenal gland, neonate N00.CNhs11191.1311-23C142.21
adrenal gland, neonate N25.CNhs11223.1377-27I359.57
amnion, adult pregnant day17.5.CNhs10488.583-22A8101.35
aorta, adult.CNhs10498.46-23H138.03
bone (os femoris), adult.CNhs10483.56-12G276.08
bone (os femoris), neonate N02.CNhs11227.1985-43F555.81
bone (os femoris), neonate N16.CNhs11225.1525-43A666.03
bone (os femoris), neonate N20.CNhs11195.1350-25C359.15
cecum, adult.CNhs10467.37-13H483.88
cerebellum, adult.CNhs10494.15-8B236.89
cerebellum, neonate N30.CNhs11135.1395-42I232.25
colon, adult.CNhs10468.36-18H7143.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7100.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1110.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4112.08
corpora quadrigemina, adult.CNhs10501.16-22A442.84
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F143.48
cortex, adult.CNhs10473.12-14D534.76
cortex, neonate N30.CNhs11107.1392-42F233.24
diencephalon, adult.CNhs10482.20-12F235.95
diencephalon, neonate N30.CNhs11201.1388-42B232.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B156.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A258.35
epididymis, adult.CNhs10490.58-23B248.78
eyeball, adult.CNhs10484.31-12G446.51
eyeball, embryo E12.CNhs11016.345-16C642.68
eyeball, embryo E14.CNhs10521.399-16E252.19
eyeball, embryo E15.CNhs10593.426-16C944.12
eyeball, embryo E17.CNhs11023.1261-18D441.75
eyeball, neonate N00.CNhs11207.633-15C638.10
eyeball, neonate N01.CNhs11140.1532-43E735.36
eyeball, neonate N02.CNhs11205.1551-44G845.35
eyeball, neonate N16.CNhs11188.777-19A231.04
forelimb, embryo E11.CNhs10596.335-25E258.20
forelimb, embryo E12.CNhs10600.359-14H244.82
forelimb, embryo E13.CNhs10589.384-1E241.88
forelimb, embryo E14.CNhs10577.413-26A860.72
forelimb, embryo E15.CNhs11007.437-20E745.32
forelimb, embryo E17.CNhs10598.1517-43C470.35
forelimb, embryo E18.CNhs11008.1520-43B557.41
gonad, embryo E13.CNhs11044.1564-45I648.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C888.48
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D284.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D595.19
heart, embryo E11.CNhs10586.331-24E941.84
heart, embryo E12.CNhs11015.353-12F542.68
heart, embryo E13.CNhs11013.376-3I935.65
heart, embryo E14.CNhs10597.403-26D437.41
heart, embryo E15.CNhs11017.431-16C835.61
heart, embryo E16.CNhs11021.457-17C635.79
heart, embryo E17.CNhs11025.479-18E541.16
heart, embryo E18.CNhs11030.1283-20G348.29
heart, neonate N00.CNhs11213.639-21E346.36
heart, neonate N03.CNhs11221.1349-25I250.36
heart, neonate N10.CNhs11118.749-24G141.86
heart, neonate N16.CNhs11209.782-15G144.43
heart, neonate N20.CNhs11127.821-26I640.06
heart, neonate N25.CNhs11196.1351-25D342.59
heart, neonate N30.CNhs11202.1390-42D234.76
hippocampus, adult.CNhs10478.13-16E826.50
hippocampus, neonate N00.CNhs11228.627-43G139.41
intestinal mucosa, adult.CNhs10506.860-29I3219.73
intestine, adult.CNhs10496.178-9A3135.93
intestine, embryo E12.CNhs11019.1251-16I536.69
intestine, embryo E13.CNhs11010.381-16D543.43
intestine, embryo E15.CNhs10602.976-16D849.87
intestine, embryo E16.CNhs10585.463-22H448.61
intestine, embryo E17.CNhs10582.482-18D355.15
intestine, embryo E18.CNhs10526.1289-20F781.99
intestine, neonate N00.CNhs11126.644-26D1131.44
intestine, neonate N01.CNhs11192.1322-23E984.33
intestine, neonate N06.CNhs11102.688-20B886.46
intestine, neonate N07.CNhs11095.720-20F275.40
intestine, neonate N10.CNhs11098.755-23A590.46
intestine, neonate N20.CNhs11187.827-18D194.38
intestine, neonate N25.CNhs11121.1352-25E3104.39
intestine, neonate N30.CNhs11131.1384-42G1121.08
kidney, embryo E14.CNhs10606.411-4I951.02
kidney, embryo E15.CNhs10997.434-16F844.90
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I243.99
kidney, embryo E18.CNhs11001.1288-20C749.26
kidney, neonate N00.CNhs11214.646-21G750.50
kidney, neonate N10.CNhs11206.758-6D548.06
kidney, neonate N20.CNhs11113.832-19I151.66
kidney, neonate N25.CNhs11122.1353-25F346.79
kidney, neonate N30.CNhs11203.1385-42H150.84
liver, adult pregnant day01.CNhs10466.508-5B262.55
liver, embryo E12.CNhs10601.355-15F876.75
liver, embryo E13.CNhs10524.378-3H680.98
liver, embryo E14.CNhs10594.409-16E188.15
liver, embryo E15.CNhs10520.433-16D776.48
liver, embryo E16.CNhs10523.462-17F589.72
liver, embryo E17.CNhs10510.481-18A384.03
liver, embryo E18.CNhs10579.499-43G479.12
liver, neonate N00.CNhs11117.641-24F458.37
liver, neonate N03.CNhs11123.1345-25G262.33
liver, neonate N06.CNhs11101.684-20A866.13
liver, neonate N07.CNhs11103.716-20H262.52
liver, neonate N10.CNhs11115.751-24B967.40
liver, neonate N20.CNhs11220.823-25A372.74
liver, neonate N25.CNhs11198.1368-26H160.46
liver, neonate N30.CNhs11106.1382-42D169.47
lung, adult.CNhs10474.28-22B171.50
lung, embryo E12.CNhs10522.354-16G248.89
lung, embryo E14.CNhs10604.404-26F850.85
lung, embryo E15.CNhs11020.432-17C552.11
lung, embryo E16.CNhs10998.458-17B651.87
lung, embryo E17.CNhs10605.480-44A663.99
lung, embryo E18.CNhs10583.1287-20I678.32
lung, neonate N00.CNhs11224.640-42C694.64
lung, neonate N06.CNhs11212.683-20E558.17
lung, neonate N07.CNhs11111.715-19A360.68
lung, neonate N10.CNhs11219.750-23E670.00
lung, neonate N20.CNhs11109.822-18A467.35
lung, neonate N25.CNhs11119.1359-25C779.26
lung, neonate N30.CNhs11133.1394-42H275.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A155.79
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A158.74
mammary gland, adult lactating day02.CNhs10480.595-22B699.83
mammary gland, adult pregnant day19.CNhs10476.588-5H265.12
medulla oblongata, adult.CNhs10477.17-12C232.91
medulla oblongata, neonate N30.CNhs11200.1396-42A332.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C789.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C231.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E238.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D743.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D531.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.23
olfactory brain, adult.CNhs10489.18-22I930.85
ovary, adult.CNhs10507.91-2I753.80
ovary, embryo E18.CNhs11040.505-44H752.17
ovary, neonate N00.CNhs11217.1299-22I459.78
oviduct, adult pregnant day01.CNhs10500.988-6G647.18
pancreas, adult.CNhs10486.34-16E461.06
pancreas, embryo E14.CNhs11012.405-44F452.44
pancreas, embryo E15.CNhs11042.1556-45F252.30
pancreas, embryo E16.CNhs11003.460-26E549.41
pancreas, embryo E17.CNhs10599.1558-45G359.36
pancreas, embryo E18.CNhs10580.1535-43I770.10
pancreas, neonate N00.CNhs11105.645-26G977.53
pancreas, neonate N01.CNhs11138.1531-43D759.26
pancreas, neonate N02.CNhs11139.1539-43D853.47
pancreas, neonate N16.CNhs11136.787-43B680.59
pancreas, neonate N25.CNhs11094.1555-45E291.71
pancreas, neonate N30.CNhs11182.1548-44H569.10
pituitary gland, adult.CNhs10493.21-1G835.41
pituitary gland, embryo E12.CNhs11018.346-16E646.46
pituitary gland, embryo E13.CNhs11009.370-44C748.38
pituitary gland, embryo E14.CNhs11037.398-44A546.30
pituitary gland, embryo E15.CNhs10592.427-16B938.84
pituitary gland, embryo E16.CNhs11036.449-43F640.31
pituitary gland, embryo E17.CNhs11039.1265-44F549.36
pituitary gland, neonate N00.CNhs11190.1308-22E945.37
placenta, adult pregnant day10.CNhs10472.539-13I767.35
placenta, adult pregnant day17.CNhs10464.577-18G379.01
prostate, adult.CNhs10470.859-1F862.19
skin, adult.CNhs10492.30-1C357.71
skin, neonate N00.CNhs11124.650-25G457.48
skin, neonate N03.CNhs11215.662-22H376.30
skin, neonate N06.CNhs11097.693-20I594.30
skin, neonate N10.CNhs11108.762-6C491.43
small intestine, neonate N16.CNhs11114.790-21I1108.43
spinal cord, adult.CNhs10505.24-13C935.79
spleen, adult.CNhs10465.25-2G287.66
spleen, embryo E16.CNhs11035.461-43C149.95
spleen, embryo E18.CNhs11011.1271-21F259.45
spleen, neonate N10.CNhs11116.752-24D177.04
spleen, neonate N20.CNhs11112.824-19H184.34
spleen, neonate N25.CNhs11099.1354-25G388.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6126.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9144.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3146.77
stomach, adult.CNhs10503.33-1H664.92
stomach, embryo E12.CNhs10588.356-43E350.61
stomach, embryo E15.CNhs10603.1252-16G856.12
stomach, embryo E16.CNhs11022.459-17D464.80
stomach, embryo E17.CNhs11006.1035-18D560.22
stomach, embryo E18.CNhs10999.1286-20C662.45
stomach, neonate N03.CNhs11193.1340-24B858.40
stomach, neonate N07.CNhs11210.718-18A973.40
stomach, neonate N25.CNhs11104.1355-25E491.88
stomach, neonate N30.CNhs11134.1386-42I1119.89
submandibular gland, adult.CNhs10469.59-29C177.05
testis, adult.CNhs10504.57-7G542.84
testis, embryo E13.CNhs11031.389-23F549.79
testis, embryo E15.CNhs11034.443-27C564.20
testis, embryo E16.CNhs11033.470-26G554.25
testis, embryo E17.CNhs11029.486-18I570.52
testis, embryo E18.CNhs11027.503-18G551.87
testis, neonate N00.CNhs11189.1300-22B750.35
testis, neonate N07.CNhs11222.726-26I466.79
testis, neonate N10.CNhs11204.763-44D951.80
testis, neonate N20.CNhs11110.839-18H334.30
testis, neonate N30.CNhs11130.1391-42E237.44
thymus, adult.CNhs10471.38-12B575.53
thymus, embryo E14.CNhs11041.402-44I462.24
thymus, embryo E15.CNhs11005.430-45I261.63
thymus, embryo E16.CNhs11002.456-26C565.74
thymus, embryo E17.CNhs10581.478-18C162.30
thymus, embryo E18.CNhs10595.1273-19G469.14
thymus, neonate N02.CNhs11181.1541-43F875.24
thymus, neonate N03.CNhs11137.2104-43C775.03
thymus, neonate N06.CNhs11197.681-26C458.86
thymus, neonate N07.CNhs11211.713-19D370.64
thymus, neonate N10.CNhs11194.748-24E462.31
thymus, neonate N20.CNhs11186.820-7A265.20
thymus, neonate N25.CNhs11125.1362-25G773.41
thymus, neonate N30.CNhs11132.1393-42G263.81
tongue, adult.CNhs10499.32-1B475.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H385.69
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F780.29
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G575.21
urinary bladder, adult.CNhs10481.879-12E446.95
uterus, adult pregnant day19.CNhs10497.590-15F576.57
uterus, adult.CNhs10509.92-27E568.32
vagina, adult.CNhs10502.89-27D5101.61
vesicular gland, adult.CNhs10491.51-27F893.79
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I853.76
whole body, embryo E12.CNhs10587.857-27C952.27
whole body, embryo E13.CNhs10512.372-23H253.44
whole body, embryo E14.5.CNhs10578.420-27D253.00
whole body, embryo E14.CNhs10519.395-14B163.30
whole body, embryo E16.CNhs10514.453-14F264.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G544.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G550.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G543.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G547.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G545.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G548.13
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G553.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G549.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G550.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G549.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G547.39
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G544.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G547.69
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G542.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G550.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G547.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G551.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G545.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G540.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G549.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G548.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G534.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G549.11
whole body, embryo E17.5.CNhs10513.490-9F955.36
whole body, embryo E17.CNhs10517.475-3I568.95
whole body, embryo E18.CNhs10516.493-3B363.16
whole body, neonate N00.CNhs10525.657-19C260.16
whole body, neonate N01.CNhs10576.659-23C649.93
whole body, neonate N06.CNhs10515.692-21D161.55
whole body, neonate N10.CNhs10518.761-6B451.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.66e-15118
endoderm1.66e-15118
presumptive endoderm1.66e-15118
digestive system3.90e-15116
digestive tract3.90e-15116
primitive gut3.90e-15116
subdivision of digestive tract4.22e-14114
gastrointestinal system5.56e-1047
organ component layer7.91e-1024
mucosa1.57e-0915
intestine1.80e-0931
connective tissue5.01e-0946
hemolymphoid system1.56e-0848
immune system1.56e-0848
intestinal mucosa2.27e-0813
wall of intestine2.27e-0813
gastrointestinal system mucosa2.27e-0813
hematopoietic system3.46e-0845
blood island3.46e-0845
endo-epithelium2.30e-0769
unilaminar epithelium4.04e-0766
gut epithelium5.31e-0755
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