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FFCP PHASE1:Mm9::chr13:56804721..56804792,+: Difference between revisions

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{{FFCP|EntrezGene=17129|HGNC=|MCL_coexpression_id=108|UniProt=P97454|association_with_transcript=-236bp_to_ENSMUST00000109874,NM_001164042,uc007qta.2_5end|description=CAGE_peak_2_at_Smad5_5end|id=chr13:56804721..56804792,+|ontology_enrichment_celltype=CL:0000540!3.76e-12!33;CL:0000047!3.76e-12!33;CL:0000031!3.76e-12!33;CL:0000404!3.76e-12!33;CL:0002319!7.59e-12!43;CL:0000221!1.51e-11!44;CL:0000133!1.51e-11!44;CL:0000393!3.01e-09!39;CL:0000211!3.01e-09!39;CL:0000055!5.78e-09!50;CL:0000117!1.56e-08!23;CL:0000337!1.56e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,3.43e-12,33;CL:0000047,3.43e-12,33;CL:0000031,3.43e-12,33;CL:0000404,3.43e-12,33;CL:0002319,6.94e-12,43;CL:0000221,1.38e-11,44;CL:0000133,1.38e-11,44;CL:0000393,2.81e-09,39;CL:0000211,2.81e-09,39;CL:0000117,1.47e-08,23;CL:0000337,1.47e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.26e-15!102;UBERON:0000924!5.26e-15!102;UBERON:0006601!5.26e-15!102;UBERON:0000073!4.28e-11!75;UBERON:0001016!4.28e-11!75;UBERON:0001017!7.22e-11!73;UBERON:0005743!7.22e-11!73;UBERON:0002346!3.04e-10!71;UBERON:0003075!3.04e-10!71;UBERON:0007284!3.04e-10!71;UBERON:0000033!5.45e-08!63;UBERON:0000468!1.21e-07!333;UBERON:0003056!1.74e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.15e-14,95;UBERON:0000924,1.15e-14,95;UBERON:0006601,1.15e-14,95;UBERON:0010371,4.02e-11,73;UBERON:0001016,4.93e-11,75;UBERON:0001017,8.33e-11,73;UBERON:0002346,3.88e-10,64;UBERON:0003075,3.88e-10,64;UBERON:0007284,3.88e-10,64;UBERON:0003056,2.05e-07,49;UBERON:0000922,4.58e-07,320|phase1_expression=8.80818659076367,0,0.454999239389536,0.30246421130683,0,0.671517087647559,0.233612640595526,1.93684985162364,0,0.468129052643987,0.34243593645101,0.478632953972018,0.856003649656029,1.66098764596095,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,2.97651515528744,1.88652807281682,1.30599894569468,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,0,1.52018735565099,1.00812051903972,0.443461021310609,0,1.23012957516914,0,0.577703239502549,0,0.204169356262369,0,0,0.523523743973798,0,0,0,3.9028013572429,3.85232338634155,2.0190142737785,1.56478268869608,8.50298109883741,7.90870257844099,7.77719596297134,5.45947044338914,2.87505128729943,0.671130424230945,2.90144856804538,0.336093799142464,1.80081605225163,2.57880095944881,1.03134418455488,13.9598357993122,12.6957835025288,6.33831403506179,3.72728985276045,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,4.79360176829448,4.99483796918021,27.996195323289,25.7861342213529,24.6080204781117,7.42692559449889,5.74258206474195,23.6407242484861,29.7120960156533,22.0612508786405,5.50579404996943,3.31987079021488,5.68344173048101,19.1235117208781,16.6507511356386,11.9810075228055,5.30447698102624,6.19038871034848,5.19514042441154,8.2496003932627,5.97961059356232,13.9799584368975,5.37655972665607,6.34801104896998,2.6087803983151,1.72084775396277,0,1.61910957491345,1.29955283489534,2.68816132258401,2.10666630197628,5.28333999991979,3.89679006904303,4.59341446863442,3.23939865486365,6.41632387071589,7.64415719119937,0,1.94841936910093,2.28023878927589,3.0331466700887,1.94112595522402,3.36619248741323,6.53145411885229,3.46970653532272,3.65358573974569,3.22861696158482,3.91878865436819,6.46737889246376,6.78599593180248,5.19109432242185,4.62717942143717,0.884610551949874,5.82360659810673,1.98757366614354,1.93950101254089,3.72783522436244,5.85561594023094,3.97948742945565,1.53274233125155,1.07833612055328,1.79970819298022,1.39777249780371,4.34392854273986,8.6925114535539,18.5968441127039,1.91206752211504,2.04572365864264,4.98691306942944,5.67844420737152,8.04530974417499,3.11017426525233,5.55990068554084,4.20883711772948,13.5325260681212,9.19608417733892,12.2442248267637,8.59017461663576,11.6342413548771,11.0177799444971,9.55757590509234,3.10444044886819,19.8322553498215,17.2086532952716,18.2989169130507,10.0830036916684,11.1218899690239,7.3132954969655,9.67176041117334,7.16523360546575,0,1.28673953557358,0.568326998791185,1.86413195281952,1.64168241986767,2.70093092191522,2.60419209143731,2.55793501271625,4.47374627373397,3.72054311600653,1.87791380979733,2.45207218971056,1.31647879930784,2.62667942526552,2.1888578577381,1.60819986167866,1.3173006917463,3.22095405024892,3.78521907415429,21.6099685996497,0.660837565967596,0.793351699990633,10.024547775156,10.6828869055802,6.44337306610467,4.63872106633688,4.22518283305254,3.42406127002606,0,3.62337700392824,3.01602250560323,3.38226002469956,4.09424582950152,0,1.94524244887225,0.995706366271836,10.2420666514664,8.45438993311993,6.76246414038483,6.92414514674068,7.5641469995374,8.13575510727695,5.69128834118316,4.13308414342886,2.82597710114475,2.71473760627961,1.77871576252289,1.66845105716094,2.16214894624523,0.899448449539415,1.42002084971952,1.20588579876208,1.52775511068852,1.15078454980324,1.13494658742525,2.47105271869273,12.9391385874619,2.97712758134803,2.80833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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:17129
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=uniprot:P97454
|association_with_transcript=-236bp_to_ENSMUST00000109874,NM_001164042,uc007qta.2_5end
|cluster_id=chr13:56804721..56804792,+
|description=CAGE_peak_2_at_Smad5_5end
|id=chr13:56804721..56804792,+
|ontology_enrichment_celltype=CL:0000540!3.76e-12!33;CL:0000047!3.76e-12!33;CL:0000031!3.76e-12!33;CL:0000404!3.76e-12!33;CL:0002319!7.59e-12!43;CL:0000221!1.51e-11!44;CL:0000133!1.51e-11!44;CL:0000393!3.01e-09!39;CL:0000211!3.01e-09!39;CL:0000055!5.78e-09!50;CL:0000117!1.56e-08!23;CL:0000337!1.56e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,3.43e-12,33;CL:0000047,3.43e-12,33;CL:0000031,3.43e-12,33;CL:0000404,3.43e-12,33;CL:0002319,6.94e-12,43;CL:0000221,1.38e-11,44;CL:0000133,1.38e-11,44;CL:0000393,2.81e-09,39;CL:0000211,2.81e-09,39;CL:0000117,1.47e-08,23;CL:0000337,1.47e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.26e-15!102;UBERON:0000924!5.26e-15!102;UBERON:0006601!5.26e-15!102;UBERON:0000073!4.28e-11!75;UBERON:0001016!4.28e-11!75;UBERON:0001017!7.22e-11!73;UBERON:0005743!7.22e-11!73;UBERON:0002346!3.04e-10!71;UBERON:0003075!3.04e-10!71;UBERON:0007284!3.04e-10!71;UBERON:0000033!5.45e-08!63;UBERON:0000468!1.21e-07!333;UBERON:0003056!1.74e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.15e-14,95;UBERON:0000924,1.15e-14,95;UBERON:0006601,1.15e-14,95;UBERON:0010371,4.02e-11,73;UBERON:0001016,4.93e-11,75;UBERON:0001017,8.33e-11,73;UBERON:0002346,3.88e-10,64;UBERON:0003075,3.88e-10,64;UBERON:0007284,3.88e-10,64;UBERON:0003056,2.05e-07,49;UBERON:0000922,4.58e-07,320
|phase1_expression=8.80818659076367,0,0.454999239389536,0.30246421130683,0,0.671517087647559,0.233612640595526,1.93684985162364,0,0.468129052643987,0.34243593645101,0.478632953972018,0.856003649656029,1.66098764596095,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,2.97651515528744,1.88652807281682,1.30599894569468,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,0,1.52018735565099,1.00812051903972,0.443461021310609,0,1.23012957516914,0,0.577703239502549,0,0.204169356262369,0,0,0.523523743973798,0,0,0,3.9028013572429,3.85232338634155,2.0190142737785,1.56478268869608,8.50298109883741,7.90870257844099,7.77719596297134,5.45947044338914,2.87505128729943,0.671130424230945,2.90144856804538,0.336093799142464,1.80081605225163,2.57880095944881,1.03134418455488,13.9598357993122,12.6957835025288,6.33831403506179,3.72728985276045,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,4.79360176829448,4.99483796918021,27.996195323289,25.7861342213529,24.6080204781117,7.42692559449889,5.74258206474195,23.6407242484861,29.7120960156533,22.0612508786405,5.50579404996943,3.31987079021488,5.68344173048101,19.1235117208781,16.6507511356386,11.9810075228055,5.30447698102624,6.19038871034848,5.19514042441154,8.2496003932627,5.97961059356232,13.9799584368975,5.37655972665607,6.34801104896998,2.6087803983151,1.72084775396277,0,1.61910957491345,1.29955283489534,2.68816132258401,2.10666630197628,5.28333999991979,3.89679006904303,4.59341446863442,3.23939865486365,6.41632387071589,7.64415719119937,0,1.94841936910093,2.28023878927589,3.0331466700887,1.94112595522402,3.36619248741323,6.53145411885229,3.46970653532272,3.65358573974569,3.22861696158482,3.91878865436819,6.46737889246376,6.78599593180248,5.19109432242185,4.62717942143717,0.884610551949874,5.82360659810673,1.98757366614354,1.93950101254089,3.72783522436244,5.85561594023094,3.97948742945565,1.53274233125155,1.07833612055328,1.79970819298022,1.39777249780371,4.34392854273986,8.6925114535539,18.5968441127039,1.91206752211504,2.04572365864264,4.98691306942944,5.67844420737152,8.04530974417499,3.11017426525233,5.55990068554084,4.20883711772948,13.5325260681212,9.19608417733892,12.2442248267637,8.59017461663576,11.6342413548771,11.0177799444971,9.55757590509234,3.10444044886819,19.8322553498215,17.2086532952716,18.2989169130507,10.0830036916684,11.1218899690239,7.3132954969655,9.67176041117334,7.16523360546575,0,1.28673953557358,0.568326998791185,1.86413195281952,1.64168241986767,2.70093092191522,2.60419209143731,2.55793501271625,4.47374627373397,3.72054311600653,1.87791380979733,2.45207218971056,1.31647879930784,2.62667942526552,2.1888578577381,1.60819986167866,1.3173006917463,3.22095405024892,3.78521907415429,21.6099685996497,0.660837565967596,0.793351699990633,10.024547775156,10.6828869055802,6.44337306610467,4.63872106633688,4.22518283305254,3.42406127002606,0,3.62337700392824,3.01602250560323,3.38226002469956,4.09424582950152,0,1.94524244887225,0.995706366271836,10.2420666514664,8.45438993311993,6.76246414038483,6.92414514674068,7.5641469995374,8.13575510727695,5.69128834118316,4.13308414342886,2.82597710114475,2.71473760627961,1.77871576252289,1.66845105716094,2.16214894624523,0.899448449539415,1.42002084971952,1.20588579876208,1.52775511068852,1.15078454980324,1.13494658742525,2.47105271869273,12.9391385874619,2.97712758134803,2.80833905803104,2.77836765741823,1.97337154874103,2.41221760681684,4.24932337383191,7.95863929436036,13.0371981153621,10.0149600607361,10.7957514212711,7.70528784232352,6.9032655856944,3.70753930929818,11.6650006638581,9.08005227559977,8.29164797018933,3.76885623846197,3.10832967358612,2.4590339958857,0,0,0.983528546038072,1.93155722413313,5.29816946959713,5.86058432961016,6.06559297893699,3.53459298086122,10.7272794601527,10.9322848403059,12.0637102730367,10.5146271099123,12.9223230967789,10.190755108398,6.07216052512342,5.55286130031493,7.51046778098395,7.71171159412337,3.83238230062325,5.52003371368491,9.93610452056814,8.08353602565424,0,5.82673526771955,3.02323556964751,2.45186603682668,2.95301892880773,3.99665692327106,3.87642439752332,5.81653967164009,2.85197902707777,1.58018378967908,0,0,6.80879211507576,11.3438489239725,10.0899773350549,10.9311887866112,9.57637261668277,7.84822797449111,7.40470592709544,8.52501857520878,2.11204537257339,5.2958017715955,1.98475558249466,12.696241476494,18.4069446433332,10.7960135621399,6.68485126417564,7.05805868903763,1.1659233465194,6.67531087237835,0.341741761595705,8.2554747185289,6.48180845793991,0.941842285023455,0.546776910884101,0.457556346413045,1.5298058699447,1.6794174278839,3.45499934511059,0,11.8625997592926,8.13277868507395,4.42821897369385,4.80903080833278,5.8957892211468,6.74321731924104,6.11635572367486,1.57053565190418,2.33306951925227,4.97071450469541,6.20062232552609,4.18646328923141,4.46737924234164,5.25018208528929,2.0665571756437,3.04121025883401,2.69921648885234,3.3853140059427,2.41176492179135,6.28118714147616,3.74439008135225,3.47612232690996,3.85177909051312,4.82741498674688,3.89762468933385,1.79026695667481,4.56967115996909,3.36547258655913,3.10148007066612,3.02899349844443,4.11516755936999,3.2264379243789,2.82627854145282,1.92423683280659,2.10378423926824,4.98806843953465,3.10780334723691,2.42227412845584,2.3503846290971,2.89784391048286,5.81815673898664,4.57879060668163,3.85863082342319,2.00628841614145,1.12950368523413,1.38097570952153,2.29158205375759,1.20297227640581,0.685082519770642,0,3.37511250115903,0.900642406448441,2.71885445390523,3.10656187051092,17.64384908931,20.3502685434526,13.1464876430683,9.96737539980005,8.17491334249131,5.88299227040045,7.11189528965169,7.2112270033613,5.45562656306086,5.05394423527595,6.84394109703647,4.14977951049368,5.61849044819294,7.04276676453562,7.17943361945166,4.76293691283074,8.11190281613988,6.75182271622968,8.24171801606613,6.32955356577908,6.85738504770831,6.38912902173615,4.5302876089991,6.54058874845478,4.51725025993587,6.59993941555077,7.68297486065645,6.05060336307039,5.70377278152619,5.05028044491965,5.21994079746366,6.89531376628944,8.59385190656348,6.19747364743864,5.01557188550968,9.49280196164194,6.31615342802603,8.16510005383534,6.88637995447836,6.39715115446595,3.01428186306548
|short_description=p2@Smad5
}}

Revision as of 04:41, 6 August 2015

Short description:p2@Smad5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Smad5_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: -236bp_to_ENSMUST00000109874, NM_001164042, uc007qta.2_5end
EntrezGene:17129
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Smad5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C313.96
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F525.79
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F96.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I36.79
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F118.60
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C613.53
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C912.24
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C611.63
eyeball, neonate N01.CNhs11140.1532-43E711.02
eyeball, neonate N02.CNhs11205.1551-44G89.56
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E219.83
forelimb, embryo E12.CNhs10600.359-14H217.21
forelimb, embryo E13.CNhs10589.384-1E218.30
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G121.61
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I510.02
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I910.24
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G78.14
kidney, neonate N10.CNhs11206.758-6D55.69
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F813.04
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B99.58
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C312.70
skin, neonate N00.CNhs11124.650-25G418.41
skin, neonate N03.CNhs11215.662-22H310.80
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C47.06
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E311.86
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D34.12
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I817.64
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H213.15
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.43e-1233
neuronal stem cell3.43e-1233
neuroblast3.43e-1233
electrically signaling cell3.43e-1233
neural cell6.94e-1243
ectodermal cell1.38e-1144
neurectodermal cell1.38e-1144
electrically responsive cell2.81e-0939
electrically active cell2.81e-0939
CNS neuron (sensu Vertebrata)1.47e-0823
neuroblast (sensu Vertebrata)1.47e-0823

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.15e-1495
ectoderm1.15e-1495
presumptive ectoderm1.15e-1495
ecto-epithelium4.02e-1173
nervous system4.93e-1175
central nervous system8.33e-1173
neurectoderm3.88e-1064
neural plate3.88e-1064
presumptive neural plate3.88e-1064
pre-chordal neural plate2.05e-0749
embryo4.58e-07320
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