FFCP PHASE1:Hg19::chr3:9895464..9895477,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr3:9895464..9895477,- | |||
|id=chr3:9895464..9895477,- | |||
|ontology_enrichment_celltype=CL:0000039!2.60e-92!7;CL:0000586!2.60e-92!7;CL:0002541!2.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.30e-116;7!CL:0000586;1.30e-116;7!CL:0000083;1.27e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.15e-116,7;CL:0000586,1.15e-116,7;CL:0000083,1.32e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.16e-30;10!UBERON:0005564;2.16e-30;10 | |||
|ontology_enrichment_disease=DOID:3095!9.43e-40!22;DOID:2994!9.43e-40!22;DOID:1799!1.30e-19!1;DOID:10165!1.30e-19!1;DOID:1798!1.30e-19!1;DOID:0050687!1.29e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.11e-37;22!DOID:2994;1.11e-37;22!DOID:1799;3.05e-34;1!DOID:10165;3.05e-34;1!DOID:1798;3.05e-34;1!DOID:1793;1.27e-09;4!DOID:170;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.07e-37,22;DOID:2994,1.07e-37,22;DOID:1799,3.61e-34,1;DOID:10165,3.61e-34,1;DOID:1798,3.61e-34,1;DOID:1793,1.32e-09,4;DOID:0050687,1.02e-08,143;DOID:170,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.20e-21!8;UBERON:0003135!1.25e-15!11;UBERON:0000991!1.76e-08!21;UBERON:0009196!1.76e-08!21;UBERON:0009117!1.76e-08!21;UBERON:0005564!1.76e-08!21;UBERON:0004176!4.03e-08!22;UBERON:0003101!4.03e-08!22;UBERON:0000079!4.03e-08!22;UBERON:0000476!2.63e-07!3;UBERON:0000920!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.77e-38;8!UBERON:0003135;1.02e-27;11!UBERON:0000991;6.08e-15;21!UBERON:0003101;2.67e-14;22!UBERON:0000079;2.67e-14;22!UBERON:0002323;8.84e-12;45!UBERON:0002553;4.77e-08;52!UBERON:0004458;1.29e-07;48!UBERON:0003133;7.23e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.18e-38,8;UBERON:0003135,9.75e-28,11;UBERON:0000991,5.94e-15,21;UBERON:0009196,5.94e-15,21;UBERON:0009117,5.94e-15,21;UBERON:0005564,5.94e-15,21;UBERON:0004176,2.61e-14,22;UBERON:0003101,2.61e-14,22;UBERON:0000079,2.61e-14,22;UBERON:0002323,4.26e-12,46;UBERON:0004458,2.16e-11,49;UBERON:0003886,2.17e-10,54;UBERON:0002553,2.94e-09,61;UBERON:0003133,6.00e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61394733071642,0.359030577639089,1.19512109114209,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28576066755414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,6.52728510348683,1.3360870263278,8.54622565674058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:9895464..9895477,- | |||
}} |
Revision as of 17:14, 21 January 2014
Short description: | p@chr3:9895464..9895477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:9895464..9895477, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.15e-116 | 7 |
germ cell | 1.15e-116 | 7 |
epithelial cell of pancreas | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 9.18e-38 | 8 |
male reproductive organ | 9.75e-28 | 11 |
gonad | 5.94e-15 | 21 |
indifferent external genitalia | 5.94e-15 | 21 |
indifferent gonad | 5.94e-15 | 21 |
gonad primordium | 5.94e-15 | 21 |
external genitalia | 2.61e-14 | 22 |
male organism | 2.61e-14 | 22 |
male reproductive system | 2.61e-14 | 22 |
body cavity | 4.26e-12 | 46 |
body cavity or lining | 2.16e-11 | 49 |
body cavity precursor | 2.17e-10 | 54 |
anatomical cavity | 2.94e-09 | 61 |
reproductive organ | 6.00e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.07e-37 | 22 |
germ cell cancer | 1.07e-37 | 22 |
islet cell tumor | 3.61e-34 | 1 |
endocrine pancreas cancer | 3.61e-34 | 1 |
pancreatic endocrine carcinoma | 3.61e-34 | 1 |
pancreatic cancer | 1.32e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |
endocrine gland cancer | 8.02e-07 | 6 |