FFCP PHASE1:Hg19::chr4:186598720..186598731,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr4:186598720..186598731,- | |||
|id=chr4:186598720..186598731,- | |||
|ontology_enrichment_celltype=CL:0002615!3.11e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.15e-26;1!UBERON:0004140;5.23e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4 | |||
|ontology_enrichment_disease=DOID:114!1.03e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.66e-50;2!DOID:178;5.23e-26;1!DOID:326;5.23e-26;1!DOID:3978;5.23e-26;1!DOID:3394;5.23e-26;1!DOID:5844;5.23e-26;1!DOID:1287;7.17e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.46e-50,2;DOID:178,4.61e-26,1;DOID:326,4.61e-26,1;DOID:3978,4.61e-26,1;DOID:3394,4.61e-26,1;DOID:5844,4.61e-26,1;DOID:1287,6.73e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.55e-22!86;UBERON:0001049!8.07e-22!57;UBERON:0005068!8.07e-22!57;UBERON:0006241!8.07e-22!57;UBERON:0007135!8.07e-22!57;UBERON:0001017!8.91e-22!82;UBERON:0000073!2.66e-21!94;UBERON:0001016!2.66e-21!94;UBERON:0002780!6.30e-21!41;UBERON:0001890!6.30e-21!41;UBERON:0006240!6.30e-21!41;UBERON:0003080!2.45e-20!42;UBERON:0001893!5.56e-20!34;UBERON:0003075!3.91e-19!86;UBERON:0007284!3.91e-19!86;UBERON:0001869!9.04e-19!32;UBERON:0002791!4.15e-18!33;UBERON:0002346!5.25e-18!90;UBERON:0007023!2.15e-17!115;UBERON:0000955!7.53e-17!69;UBERON:0006238!7.53e-17!69;UBERON:0002616!8.62e-17!59;UBERON:0003056!3.63e-16!61;UBERON:0002020!3.49e-15!34;UBERON:0003528!3.49e-15!34;UBERON:0000200!2.19e-13!6;UBERON:0000956!5.38e-13!25;UBERON:0000203!5.38e-13!25;UBERON:0002619!2.23e-12!22;UBERON:0004121!7.63e-12!169;UBERON:0000924!2.11e-11!173;UBERON:0006601!2.11e-11!173;UBERON:0001950!3.77e-11!20;UBERON:0002771!9.92e-11!3;UBERON:0001871!1.88e-10!7;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000033!3.64e-09!123;UBERON:0001905!3.61e-08!2;UBERON:0002757!3.61e-08!2;UBERON:0010134!3.61e-08!2;UBERON:0002784!3.61e-08!2;UBERON:0005408!3.61e-08!2;UBERON:0001899!3.61e-08!2;UBERON:0000025!3.71e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.37e-34;3!UBERON:0000946;8.37e-34;3!UBERON:0002146;3.15e-26;1!UBERON:0005623;3.15e-26;1!UBERON:0002135;9.79e-26;1!UBERON:0007100;5.10e-25;25!UBERON:0002133;1.37e-13;2!UBERON:0010313;6.77e-11;10!UBERON:0000948;7.93e-11;22!UBERON:0003103;4.02e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.70e-34,3;UBERON:0009751,7.70e-34,3;UBERON:0000946,7.70e-34,3;UBERON:0002523,7.70e-34,3;UBERON:0005983,7.70e-34,3;UBERON:0002165,7.70e-34,3;UBERON:0002062,7.70e-34,3;UBERON:0007280,7.70e-34,3;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0002135,7.62e-26,1;UBERON:0007100,3.31e-23,27;UBERON:0004797,3.79e-15,7;UBERON:0002133,1.21e-13,2;UBERON:0010313,6.61e-11,10;UBERON:0002342,6.61e-11,10;UBERON:0005062,6.61e-11,10;UBERON:0000948,5.57e-10,24;UBERON:0005498,5.57e-10,24;UBERON:0004140,5.57e-10,24;UBERON:0009881,5.57e-10,24;UBERON:0004141,5.57e-10,24;UBERON:0003084,5.57e-10,24;UBERON:0007005,5.57e-10,24;UBERON:0004139,5.57e-10,24;UBERON:0004291,5.57e-10,24;UBERON:0003103,2.19e-09,68 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.39641200636127,4.58320848023367,0,2.59582700648688,10.7306512034143,0.89268582976749,2.5529719544956,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0.0636471582781649,0.808468755832877,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chr4:186598720..186598731,- | |||
}} |
Revision as of 04:20, 22 January 2014
Short description: | p@chr4:186598720..186598731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:186598720..186598731, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 7.70e-34 | 3 |
cardiac mesenchyme | 7.70e-34 | 3 |
cardial valve | 7.70e-34 | 3 |
tunica intima | 7.70e-34 | 3 |
heart layer | 7.70e-34 | 3 |
endocardium | 7.70e-34 | 3 |
endocardial cushion | 7.70e-34 | 3 |
presumptive endocardium | 7.70e-34 | 3 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
mitral valve | 7.62e-26 | 1 |
primary circulatory organ | 3.31e-23 | 27 |
blood vessel layer | 3.79e-15 | 7 |
atrioventricular valve | 1.21e-13 | 2 |
neural crest-derived structure | 6.61e-11 | 10 |
neural crest | 6.61e-11 | 10 |
neural fold | 6.61e-11 | 10 |
heart | 5.57e-10 | 24 |
primitive heart tube | 5.57e-10 | 24 |
primary heart field | 5.57e-10 | 24 |
anterior lateral plate mesoderm | 5.57e-10 | 24 |
heart tube | 5.57e-10 | 24 |
heart primordium | 5.57e-10 | 24 |
cardiac mesoderm | 5.57e-10 | 24 |
cardiogenic plate | 5.57e-10 | 24 |
heart rudiment | 5.57e-10 | 24 |
compound organ | 2.19e-09 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.46e-50 | 2 |
vascular disease | 4.61e-26 | 1 |
ischemia | 4.61e-26 | 1 |
extrinsic cardiomyopathy | 4.61e-26 | 1 |
myocardial ischemia | 4.61e-26 | 1 |
myocardial infarction | 4.61e-26 | 1 |
cardiovascular system disease | 6.73e-26 | 4 |