FFCP PHASE1:Mm9::chr15:37162850..37162864,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=960|UniProt=|association_with_transcript=31bp_to_ENSMUST00000159411,uc011zsf.1_5end|description=CAGE_peak_2_at_ENSMUST00000159411_5end,CAGE_peak_3_at_uc011zsf.1_5end|id=chr15:37162850..37162864,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!7.15e-12!23;UBERON:0000020!2.43e-10!12;UBERON:0001032!2.43e-10!12;UBERON:0004456!2.43e-10!12;UBERON:0001444!5.19e-10!11;UBERON:0005085!8.80e-09!13;UBERON:0000970!3.07e-08!9;UBERON:0000019!3.07e-08!9;UBERON:0000047!3.07e-08!9;UBERON:0004088!3.07e-08!9;UBERON:0002104!3.07e-08!9;UBERON:0001456!3.07e-08!9;UBERON:0003072!3.07e-08!9;UBERON:0003071!3.07e-08!9;UBERON:0004128!3.07e-08!9;UBERON:0002102!7.09e-07!8;UBERON:0004710!7.09e-07!8;UBERON:0005419!7.09e-07!8;UBERON:0005417!7.09e-07!8;UBERON:0005729!7.09e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.50e-34,22;UBERON:0000014,6.87e-18,5;UBERON:0001003,6.87e-18,5;UBERON:0002097,6.87e-18,5;UBERON:0002199,6.87e-18,5;UBERON:0007029,6.87e-18,5;UBERON:0007376,6.87e-18,5;UBERON:0002416,6.87e-18,5;UBERON:0007383,6.87e-18,5;UBERON:0002102,1.02e-17,7;UBERON:0004710,1.02e-17,7;UBERON:0005419,1.02e-17,7;UBERON:0005417,1.02e-17,7;UBERON:0005729,1.02e-17,7;UBERON:0010708,1.92e-15,8;UBERON:0000161,2.54e-12,5;UBERON:0000162,5.33e-12,3;UBERON:0001353,5.33e-12,3;UBERON:0000163,5.33e-12,3;UBERON:0006866,5.33e-12,3;UBERON:0001046,5.33e-12,3;UBERON:0000164,5.33e-12,3;UBERON:0000931,5.33e-12,3;UBERON:0000026,4.01e-10,12;UBERON:0004708,4.01e-10,12;UBERON:0002101,4.01e-10,12;UBERON:0004357,4.01e-10,12;UBERON:0004347,4.01e-10,12;UBERON:0005732,4.01e-10,12;UBERON:0005733,4.01e-10,12;UBERON:0010707,2.65e-09,13;UBERON:0010147,8.30e-09,2;UBERON:0003937,8.30e-09,2;UBERON:0005399,8.30e-09,2;UBERON:0001008,8.36e-09,19;UBERON:0004122,2.29e-07,5;UBERON:0006554,5.42e-07,18;UBERON:0004175,7.19e-07,9|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,5.55990068554084,0.420883711772948,0.650602214813519,0.459804208866946,0.540186389416048,0.60281927134286,0.95251098811859,0.768682321709099,0.655912071918102,0.776110112217047,0.431135985865684,1.51284864134255,1.58356011747554,3.5071317188412,5.28289773528636,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,1.1270773567308,0,0.193952487167626,0.420814919341911,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,2.1183207086382,3.74898276693435,2.30840754118072,1.13025098687134,1.68876189798836,4.05865969610664,4.26766339337159,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,2.37611749807963,3.3454127362315,2.83871332870031,3.77620169877498,1.73572257023205,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0,0,0,0,3.40095575422817,0,0,0,6.18206700903009,0,0,2.35805216986972,25.5801773058035,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.682934423016537,0.729320151204882,1.04806581313991,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0.872078499793971,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.749431733813838,0.701794825336225,0.644613162144895,0,0.441182838239031,0.231867835620421|short_description=p2@ENSMUST00000159411,p3@uc011zsf.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=960 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENSMUST00000159411,uc011zsf.1_5end | |||
|cluster_id=chr15:37162850..37162864,- | |||
|description=CAGE_peak_2_at_ENSMUST00000159411_5end,CAGE_peak_3_at_uc011zsf.1_5end | |||
|id=chr15:37162850..37162864,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.15e-12!23;UBERON:0000020!2.43e-10!12;UBERON:0001032!2.43e-10!12;UBERON:0004456!2.43e-10!12;UBERON:0001444!5.19e-10!11;UBERON:0005085!8.80e-09!13;UBERON:0000970!3.07e-08!9;UBERON:0000019!3.07e-08!9;UBERON:0000047!3.07e-08!9;UBERON:0004088!3.07e-08!9;UBERON:0002104!3.07e-08!9;UBERON:0001456!3.07e-08!9;UBERON:0003072!3.07e-08!9;UBERON:0003071!3.07e-08!9;UBERON:0004128!3.07e-08!9;UBERON:0002102!7.09e-07!8;UBERON:0004710!7.09e-07!8;UBERON:0005419!7.09e-07!8;UBERON:0005417!7.09e-07!8;UBERON:0005729!7.09e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.50e-34,22;UBERON:0000014,6.87e-18,5;UBERON:0001003,6.87e-18,5;UBERON:0002097,6.87e-18,5;UBERON:0002199,6.87e-18,5;UBERON:0007029,6.87e-18,5;UBERON:0007376,6.87e-18,5;UBERON:0002416,6.87e-18,5;UBERON:0007383,6.87e-18,5;UBERON:0002102,1.02e-17,7;UBERON:0004710,1.02e-17,7;UBERON:0005419,1.02e-17,7;UBERON:0005417,1.02e-17,7;UBERON:0005729,1.02e-17,7;UBERON:0010708,1.92e-15,8;UBERON:0000161,2.54e-12,5;UBERON:0000162,5.33e-12,3;UBERON:0001353,5.33e-12,3;UBERON:0000163,5.33e-12,3;UBERON:0006866,5.33e-12,3;UBERON:0001046,5.33e-12,3;UBERON:0000164,5.33e-12,3;UBERON:0000931,5.33e-12,3;UBERON:0000026,4.01e-10,12;UBERON:0004708,4.01e-10,12;UBERON:0002101,4.01e-10,12;UBERON:0004357,4.01e-10,12;UBERON:0004347,4.01e-10,12;UBERON:0005732,4.01e-10,12;UBERON:0005733,4.01e-10,12;UBERON:0010707,2.65e-09,13;UBERON:0010147,8.30e-09,2;UBERON:0003937,8.30e-09,2;UBERON:0005399,8.30e-09,2;UBERON:0001008,8.36e-09,19;UBERON:0004122,2.29e-07,5;UBERON:0006554,5.42e-07,18;UBERON:0004175,7.19e-07,9 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,5.55990068554084,0.420883711772948,0.650602214813519,0.459804208866946,0.540186389416048,0.60281927134286,0.95251098811859,0.768682321709099,0.655912071918102,0.776110112217047,0.431135985865684,1.51284864134255,1.58356011747554,3.5071317188412,5.28289773528636,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,1.1270773567308,0,0.193952487167626,0.420814919341911,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,2.1183207086382,3.74898276693435,2.30840754118072,1.13025098687134,1.68876189798836,4.05865969610664,4.26766339337159,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,2.37611749807963,3.3454127362315,2.83871332870031,3.77620169877498,1.73572257023205,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0,0,0,0,3.40095575422817,0,0,0,6.18206700903009,0,0,2.35805216986972,25.5801773058035,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.682934423016537,0.729320151204882,1.04806581313991,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0.872078499793971,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.749431733813838,0.701794825336225,0.644613162144895,0,0.441182838239031,0.231867835620421 | |||
|short_description=p2@ENSMUST00000159411,p3@uc011zsf.1 | |||
}} |
Latest revision as of 05:30, 5 August 2015
Short description: | p2@ENSMUST00000159411, p3@uc011zsf.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000159411_5end, CAGE_peak_3_at_uc011zsf.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:960 |
Association with transcript: | 31bp_to_ENSMUST00000159411, uc011zsf.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 3.50e-34 | 22 |
zone of skin | 6.87e-18 | 5 |
skin epidermis | 6.87e-18 | 5 |
skin of body | 6.87e-18 | 5 |
integument | 6.87e-18 | 5 |
surface | 6.87e-18 | 5 |
outer epithelium | 6.87e-18 | 5 |
integumental system | 6.87e-18 | 5 |
enveloping layer of ectoderm | 6.87e-18 | 5 |
forelimb | 1.02e-17 | 7 |
pectoral appendage | 1.02e-17 | 7 |
pectoral appendage bud | 1.02e-17 | 7 |
forelimb bud | 1.02e-17 | 7 |
forelimb/pectoral fin field | 1.02e-17 | 7 |
pectoral complex | 1.92e-15 | 8 |
orifice | 2.54e-12 | 5 |
cloaca | 5.33e-12 | 3 |
anal region | 5.33e-12 | 3 |
embryonic cloaca | 5.33e-12 | 3 |
terminal part of digestive tract | 5.33e-12 | 3 |
hindgut | 5.33e-12 | 3 |
primitive urogenital sinus | 5.33e-12 | 3 |
proctodeum | 5.33e-12 | 3 |
appendage | 4.01e-10 | 12 |
paired limb/fin | 4.01e-10 | 12 |
limb | 4.01e-10 | 12 |
paired limb/fin bud | 4.01e-10 | 12 |
limb bud | 4.01e-10 | 12 |
limb/fin field | 4.01e-10 | 12 |
limb field | 4.01e-10 | 12 |
appendage girdle complex | 2.65e-09 | 13 |
male accessory sex gland | 8.30e-09 | 2 |
sex gland | 8.30e-09 | 2 |
male reproductive gland | 8.30e-09 | 2 |
renal system | 8.36e-09 | 19 |
genitourinary system | 2.29e-07 | 5 |
urinary system structure | 5.42e-07 | 18 |
internal genitalia | 7.19e-07 | 9 |