FFCP PHASE1:Mm9::chr16:11406711..11406768,+: Difference between revisions
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{{FFCP|EntrezGene=74478|HGNC=|MCL_coexpression_id=11|UniProt=E9Q6P3|association_with_transcript=0bp_to_ENSMUST00000122168_5end|description=CAGE_peak_3_at_Snx29_5end|id=chr16:11406711..11406768,+|ontology_enrichment_celltype=CL:0000181!2.04e-08!5;CL:0000417!2.04e-08!5;CL:0000668!2.04e-08!5;CL:0000412!2.04e-08!5;CL:0000182!2.04e-08!5|ontology_enrichment_celltype_v019_2=CL:0000182,3.60e-16,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!4.68e-16!14;UBERON:0003918!4.68e-16!14;UBERON:0005095!4.68e-16!14;UBERON:0007687!4.68e-16!14;UBERON:0006554!8.93e-14!16;UBERON:0001008!7.75e-13!17;UBERON:0005172!8.87e-11!49;UBERON:0005173!8.87e-11!49;UBERON:0002417!8.87e-11!49;UBERON:0000916!8.87e-11!49;UBERON:0000489!5.55e-10!21;UBERON:0009569!5.73e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.82e-22,14;UBERON:0003918,4.82e-22,14;UBERON:0011143,4.82e-22,14;UBERON:0005095,4.82e-22,14;UBERON:0007687,4.82e-22,14;UBERON:0005172,6.26e-18,49;UBERON:0005173,6.26e-18,49;UBERON:0002417,6.26e-18,49;UBERON:0000916,6.26e-18,49;UBERON:0006554,6.03e-17,18;UBERON:0001008,5.26e-16,19;UBERON:0000489,2.16e-14,21;UBERON:0003104,5.34e-14,61;UBERON:0009142,5.34e-14,61;UBERON:0009569,8.84e-13,66;UBERON:0005177,5.54e-12,79;UBERON:0002100,3.04e-10,90;UBERON:0002107,1.12e-07,22;UBERON:0007499,1.12e-07,22;UBERON:0006925,1.12e-07,22;UBERON:0009497,1.12e-07,22;UBERON:0000015,1.12e-07,22;UBERON:0002423,1.12e-07,22;UBERON:0006235,1.12e-07,22;UBERON:0008835,1.12e-07,22;UBERON:0003894,1.12e-07,22;UBERON:0004161,1.12e-07,22;UBERON:0008836,1.12e-07,22;UBERON:0009854,2.53e-07,23;UBERON:0009856,2.53e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.77997836737302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,1.3599426674155,10.2543606411185,7.79731700937203,7.16843019355737,2.94933282276679,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14248512609729,0,2.64746726198909,2.52138233317913,3.57692681440625,12.7105439619757,51.95877208882,61.3865025859775,49.482262732642,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,1.97337154874103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p3@Snx29}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74478 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q6P3 | |||
|association_with_transcript=0bp_to_ENSMUST00000122168_5end | |||
|cluster_id=chr16:11406711..11406768,+ | |||
|description=CAGE_peak_3_at_Snx29_5end | |||
|id=chr16:11406711..11406768,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.04e-08!5;CL:0000417!2.04e-08!5;CL:0000668!2.04e-08!5;CL:0000412!2.04e-08!5;CL:0000182!2.04e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.60e-16,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.68e-16!14;UBERON:0003918!4.68e-16!14;UBERON:0005095!4.68e-16!14;UBERON:0007687!4.68e-16!14;UBERON:0006554!8.93e-14!16;UBERON:0001008!7.75e-13!17;UBERON:0005172!8.87e-11!49;UBERON:0005173!8.87e-11!49;UBERON:0002417!8.87e-11!49;UBERON:0000916!8.87e-11!49;UBERON:0000489!5.55e-10!21;UBERON:0009569!5.73e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.82e-22,14;UBERON:0003918,4.82e-22,14;UBERON:0011143,4.82e-22,14;UBERON:0005095,4.82e-22,14;UBERON:0007687,4.82e-22,14;UBERON:0005172,6.26e-18,49;UBERON:0005173,6.26e-18,49;UBERON:0002417,6.26e-18,49;UBERON:0000916,6.26e-18,49;UBERON:0006554,6.03e-17,18;UBERON:0001008,5.26e-16,19;UBERON:0000489,2.16e-14,21;UBERON:0003104,5.34e-14,61;UBERON:0009142,5.34e-14,61;UBERON:0009569,8.84e-13,66;UBERON:0005177,5.54e-12,79;UBERON:0002100,3.04e-10,90;UBERON:0002107,1.12e-07,22;UBERON:0007499,1.12e-07,22;UBERON:0006925,1.12e-07,22;UBERON:0009497,1.12e-07,22;UBERON:0000015,1.12e-07,22;UBERON:0002423,1.12e-07,22;UBERON:0006235,1.12e-07,22;UBERON:0008835,1.12e-07,22;UBERON:0003894,1.12e-07,22;UBERON:0004161,1.12e-07,22;UBERON:0008836,1.12e-07,22;UBERON:0009854,2.53e-07,23;UBERON:0009856,2.53e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.77997836737302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,1.3599426674155,10.2543606411185,7.79731700937203,7.16843019355737,2.94933282276679,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14248512609729,0,2.64746726198909,2.52138233317913,3.57692681440625,12.7105439619757,51.95877208882,61.3865025859775,49.482262732642,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,1.97337154874103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@Snx29 | |||
}} |
Revision as of 01:13, 6 August 2015
Short description: | p3@Snx29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snx29_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000122168_5end |
EntrezGene: | 74478 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.60e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.82e-22 | 14 |
kidney mesenchyme | 4.82e-22 | 14 |
upper urinary tract | 4.82e-22 | 14 |
kidney rudiment | 4.82e-22 | 14 |
kidney field | 4.82e-22 | 14 |
abdomen element | 6.26e-18 | 49 |
abdominal segment element | 6.26e-18 | 49 |
abdominal segment of trunk | 6.26e-18 | 49 |
abdomen | 6.26e-18 | 49 |
urinary system structure | 6.03e-17 | 18 |
renal system | 5.26e-16 | 19 |
cavitated compound organ | 2.16e-14 | 21 |
mesenchyme | 5.34e-14 | 61 |
entire embryonic mesenchyme | 5.34e-14 | 61 |
subdivision of trunk | 8.84e-13 | 66 |
trunk region element | 5.54e-12 | 79 |
trunk | 3.04e-10 | 90 |
liver | 1.12e-07 | 22 |
epithelial sac | 1.12e-07 | 22 |
digestive gland | 1.12e-07 | 22 |
epithelium of foregut-midgut junction | 1.12e-07 | 22 |
anatomical boundary | 1.12e-07 | 22 |
hepatobiliary system | 1.12e-07 | 22 |
foregut-midgut junction | 1.12e-07 | 22 |
hepatic diverticulum | 1.12e-07 | 22 |
liver primordium | 1.12e-07 | 22 |
septum transversum | 1.12e-07 | 22 |
liver bud | 1.12e-07 | 22 |
digestive tract diverticulum | 2.53e-07 | 23 |
sac | 2.53e-07 | 23 |