FFCP PHASE1:Hg19::chr4:88903956..88903966,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_at_chr4:88903956..88903966,+ | |||
|id=chr4:88903956..88903966,+ | |||
|ontology_enrichment_celltype=CL:0000235!4.05e-11!10;CL:0000159!3.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.47e-33;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.83e-33,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.87e-23;1 | |||
|ontology_enrichment_disease=DOID:4468!1.26e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-14!57;UBERON:0005068!1.08e-14!57;UBERON:0006241!1.08e-14!57;UBERON:0007135!1.08e-14!57;UBERON:0007023!1.80e-14!115;UBERON:0005743!6.32e-14!86;UBERON:0001017!1.40e-13!82;UBERON:0000073!4.71e-12!94;UBERON:0001016!4.71e-12!94;UBERON:0002780!1.26e-11!41;UBERON:0001890!1.26e-11!41;UBERON:0006240!1.26e-11!41;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0003080!2.83e-11!42;UBERON:0002020!6.92e-11!34;UBERON:0003528!6.92e-11!34;UBERON:0002616!7.90e-11!59;UBERON:0002346!1.19e-10!90;UBERON:0001893!1.19e-10!34;UBERON:0006331!7.92e-10!3;UBERON:0000955!1.01e-09!69;UBERON:0006238!1.01e-09!69;UBERON:0002791!2.16e-09!33;UBERON:0003056!5.75e-09!61;UBERON:0002308!5.49e-08!9;UBERON:0000125!5.49e-08!9;UBERON:0001869!5.52e-08!32;UBERON:0003124!4.95e-07!7;UBERON:0002148!8.08e-07!2;UBERON:0009662!8.08e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;4.10e-23;1!UBERON:0009661;4.10e-23;1!UBERON:0002950;4.10e-23;1!UBERON:0001891;4.10e-23;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.28e-23,1;UBERON:0009661,3.28e-23,1;UBERON:0002950,3.28e-23,1;UBERON:0001891,3.28e-23,1;UBERON:0009616,3.28e-23,1;UBERON:0010286,3.28e-23,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.738651018262192,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,1.89898258075224,0.816164040795739,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,2.08012009519708,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,3.94028536495991,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0.891139200981258,0,0,0,0,0,0,0,0,0,0,1.72007499781742,0,0,0,0,0,0,0,0.378499274505237,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr4:88903956..88903966,+ | |||
}} |
Revision as of 02:11, 22 January 2014
Short description: | p@chr4:88903956..88903966, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88903956..88903966, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.83e-33 | 6 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.28e-23 | 1 |
midbrain nucleus | 3.28e-23 | 1 |
regional part of midbrain | 3.28e-23 | 1 |
midbrain | 3.28e-23 | 1 |
presumptive midbrain | 3.28e-23 | 1 |
midbrain neural tube | 3.28e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.32e-12 | 2 |