FFCP PHASE1:Hg19::chr5:179233976..179233987,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7048 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UQ53 | |||
|association_with_transcript=-24bp_to_ENST00000518168,NM_014275,uc003mks.2_5end | |||
|description=CAGE_peak_5_at_MGAT4B_5end | |||
|id=chr5:179233976..179233987,- | |||
|ontology_enrichment_celltype=CL:0000066!2.55e-26!254;CL:0002321!1.30e-18!248;CL:0000220!1.94e-18!246;CL:0000222!1.69e-15!119;CL:0000213!4.73e-15!57;CL:0000215!4.73e-15!57;CL:0002078!8.09e-11!44;CL:1000449!9.02e-10!16;CL:0000115!1.54e-09!35;CL:0000548!3.47e-09!679;CL:0000004!3.47e-09!679;CL:0000255!3.47e-09!679;CL:1000497!6.18e-09!18;CL:0002518!6.18e-09!18;CL:0000012!1.13e-08!682;CL:1000507!1.40e-08!12;CL:1000494!1.40e-08!12;CL:0002139!2.89e-08!24;CL:0000077!7.54e-08!19;CL:0002681!7.72e-08!13;CL:0002584!7.72e-08!13;CL:0000076!7.82e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.36e-10;15!CL:0000213;1.82e-09;58!CL:0000215;1.82e-09;58!CL:1000497;2.82e-09;17!CL:0002518;2.82e-09;17!CL:0002139;4.14e-09;24!CL:0000115;9.82e-09;36!CL:1000507;2.36e-08;10!CL:1000494;2.36e-08;10!CL:0002681;4.19e-08;12!CL:0002584;4.19e-08;12!CL:0000077;5.88e-08;19!CL:0002078;6.57e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.22e-25,253;CL:0002321,1.26e-18,250;CL:0000222,2.01e-16,121;CL:0000213,7.86e-16,58;CL:0000215,7.86e-16,58;CL:0002078,2.25e-11,45;CL:1000449,6.44e-10,15;CL:0000115,7.13e-10,36;CL:1000497,4.98e-09,17;CL:0002518,4.98e-09,17;CL:0002139,1.25e-08,24;CL:1000507,3.25e-08,10;CL:1000494,3.25e-08,10;CL:0000077,3.43e-08,19;CL:0002681,7.10e-08,12;CL:0002584,7.10e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.94e-14!118;UBERON:0004211!9.02e-10!16;UBERON:0001285!9.02e-10!16;UBERON:0007684!9.02e-10!16;UBERON:0003220!9.02e-10!16;UBERON:0004208!9.02e-10!16;UBERON:0002049!4.42e-09!79;UBERON:0007798!4.42e-09!79;UBERON:0000055!5.24e-09!69;UBERON:0006555!6.06e-09!17;UBERON:0005103!6.06e-09!17;UBERON:0000083!6.06e-09!17;UBERON:0009201!6.06e-09!17;UBERON:0004819!6.06e-09!17;UBERON:0006553!6.06e-09!17;UBERON:0003074!6.06e-09!17;UBERON:0003060!6.06e-09!17;UBERON:0009773!1.40e-08!12;UBERON:0001231!1.40e-08!12;UBERON:0004810!1.40e-08!12;UBERON:0000353!3.36e-08!17;UBERON:0004876!4.68e-08!20;UBERON:0001851!7.61e-08!16;UBERON:0001225!7.72e-08!13;UBERON:0008987!7.72e-08!13;UBERON:0000483!8.14e-08!309;UBERON:0000477!1.04e-07!286;UBERON:0000080!1.20e-07!18;UBERON:0002120!1.20e-07!18;UBERON:0004875!1.20e-07!18;UBERON:0005721!1.20e-07!18;UBERON:0005754!1.20e-07!18;UBERON:0007297!1.20e-07!18;UBERON:0005256!1.55e-07!143;UBERON:0004872!1.83e-07!84;UBERON:0000119!2.47e-07!312;UBERON:0000480!3.63e-07!626;UBERON:0000467!3.69e-07!625;UBERON:0002100!4.27e-07!216;UBERON:0003064!4.85e-07!37;UBERON:0001981!7.13e-07!60;UBERON:0007500!7.13e-07!60;UBERON:0004537!7.13e-07!60;UBERON:0006965!7.13e-07!60;UBERON:0000058!7.57e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.36e-10;15!UBERON:0004819;3.36e-10;15!UBERON:0001285;3.36e-10;15!UBERON:0007684;3.36e-10;15!UBERON:0000353;9.62e-09;15!UBERON:0004211;2.36e-08;10!UBERON:0009773;2.36e-08;10!UBERON:0001231;2.36e-08;10!UBERON:0004810;2.36e-08;10!UBERON:0001851;2.70e-08;15!UBERON:0001225;4.19e-08;12!UBERON:0008987;4.19e-08;12!UBERON:0003914;6.53e-08;74!UBERON:0006554;3.81e-07;30!UBERON:0001008;3.81e-07;30!UBERON:0002113;4.66e-07;24!UBERON:0011143;4.66e-07;24!UBERON:0000055;8.48e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.35e-14,117;UBERON:0004211,6.44e-10,15;UBERON:0009773,6.44e-10,15;UBERON:0001231,6.44e-10,15;UBERON:0001285,6.44e-10,15;UBERON:0007684,6.44e-10,15;UBERON:0004208,6.44e-10,15;UBERON:0000055,9.82e-10,68;UBERON:0002049,1.22e-09,78;UBERON:0007798,1.22e-09,78;UBERON:0006555,1.08e-08,16;UBERON:0004819,1.08e-08,16;UBERON:0000353,1.23e-08,15;UBERON:0002100,1.93e-08,199;UBERON:0004810,3.25e-08,10;UBERON:0001225,7.10e-08,12;UBERON:0008987,7.10e-08,12;UBERON:0001851,7.28e-08,15;UBERON:0004872,9.16e-08,83;UBERON:0007500,1.27e-07,59;UBERON:0001981,1.27e-07,59;UBERON:0004537,1.27e-07,59;UBERON:0006965,1.27e-07,59;UBERON:0001637,6.37e-07,42;UBERON:0003509,6.37e-07,42;UBERON:0004572,6.37e-07,42;UBERON:0000483,6.78e-07,306 | |||
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| |||
|short_description=p5@MGAT4B | |||
}} |
Revision as of 09:27, 22 January 2014
Short description: | p5@MGAT4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MGAT4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000518168, NM_014275, uc003mks.2_5end |
EntrezGene: | MGAT4B |
HGNC: | 7048 |
UniProt: | Q9UQ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.22e-25 | 253 |
embryonic cell | 1.26e-18 | 250 |
mesodermal cell | 2.01e-16 | 121 |
lining cell | 7.86e-16 | 58 |
barrier cell | 7.86e-16 | 58 |
meso-epithelial cell | 2.25e-11 | 45 |
epithelial cell of nephron | 6.44e-10 | 15 |
endothelial cell | 7.13e-10 | 36 |
kidney cell | 4.98e-09 | 17 |
kidney epithelial cell | 4.98e-09 | 17 |
endothelial cell of vascular tree | 1.25e-08 | 24 |
kidney tubule cell | 3.25e-08 | 10 |
nephron tubule epithelial cell | 3.25e-08 | 10 |
mesothelial cell | 3.43e-08 | 19 |
kidney cortical cell | 7.10e-08 | 12 |
renal cortical epithelial cell | 7.10e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.35e-14 | 117 |
nephron epithelium | 6.44e-10 | 15 |
renal tubule | 6.44e-10 | 15 |
nephron tubule | 6.44e-10 | 15 |
nephron | 6.44e-10 | 15 |
uriniferous tubule | 6.44e-10 | 15 |
nephrogenic mesenchyme | 6.44e-10 | 15 |
vessel | 9.82e-10 | 68 |
vasculature | 1.22e-09 | 78 |
vascular system | 1.22e-09 | 78 |
excretory tube | 1.08e-08 | 16 |
kidney epithelium | 1.08e-08 | 16 |
parenchyma | 1.23e-08 | 15 |
trunk | 1.93e-08 | 199 |
nephron tubule epithelium | 3.25e-08 | 10 |
cortex of kidney | 7.10e-08 | 12 |
renal parenchyma | 7.10e-08 | 12 |
cortex | 7.28e-08 | 15 |
splanchnic layer of lateral plate mesoderm | 9.16e-08 | 83 |
epithelial tube open at both ends | 1.27e-07 | 59 |
blood vessel | 1.27e-07 | 59 |
blood vasculature | 1.27e-07 | 59 |
vascular cord | 1.27e-07 | 59 |
artery | 6.37e-07 | 42 |
arterial blood vessel | 6.37e-07 | 42 |
arterial system | 6.37e-07 | 42 |
epithelium | 6.78e-07 | 306 |