FFCP PHASE1:Mm9::chr18:65553634..65553645,-: Difference between revisions
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{{FFCP|EntrezGene=225638|HGNC=|MCL_coexpression_id=19|UniProt=E9QL35,Q91ZB0|association_with_transcript=-92bp_to_ENSMUST00000035548,NM_001037294,uc008feu.2_5end|description=CAGE_peak_4_at_Alpk2_5end|id=chr18:65553634..65553645,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.88e-30!18;UBERON:0000948!5.88e-30!18;UBERON:0005498!5.88e-30!18;UBERON:0004140!5.88e-30!18;UBERON:0009881!5.88e-30!18;UBERON:0004141!5.88e-30!18;UBERON:0003084!5.88e-30!18;UBERON:0007005!5.88e-30!18;UBERON:0004139!5.88e-30!18;UBERON:0004291!5.88e-30!18;UBERON:0004535!1.29e-22!23;UBERON:0001009!1.29e-22!23;UBERON:0004872!1.28e-14!33;UBERON:0003103!1.50e-13!43;UBERON:0003914!1.74e-10!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.75e-72,18;UBERON:0000948,5.75e-72,18;UBERON:0005498,5.75e-72,18;UBERON:0004140,5.75e-72,18;UBERON:0009881,5.75e-72,18;UBERON:0004141,5.75e-72,18;UBERON:0003084,5.75e-72,18;UBERON:0007005,5.75e-72,18;UBERON:0004139,5.75e-72,18;UBERON:0004291,5.75e-72,18;UBERON:0004535,4.76e-56,23;UBERON:0001009,4.76e-56,23;UBERON:0004872,1.16e-38,33;UBERON:0003103,2.42e-29,43;UBERON:0003914,1.01e-26,47;UBERON:0003081,1.02e-13,87;UBERON:0010314,6.98e-13,92;UBERON:0000025,4.57e-10,114;UBERON:0000926,1.78e-09,120;UBERON:0004120,1.78e-09,120;UBERON:0006603,1.78e-09,120;UBERON:0004111,2.72e-09,122;UBERON:0001048,2.68e-08,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,3.10688658803253,2.81431271977315,2.70093092191522,3.78791576936336,4.13204886669548,2.93107514486019,2.79040733700489,2.95100741539581,4.2035523252181,2.79751744852917,3.11918181750281,3.89130285820108,3.36259971078264,2.85415149878366,3.35516046900929,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p4@Alpk2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225638 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QL35,uniprot:Q91ZB0 | |||
|association_with_transcript=-92bp_to_ENSMUST00000035548,NM_001037294,uc008feu.2_5end | |||
|cluster_id=chr18:65553634..65553645,- | |||
|description=CAGE_peak_4_at_Alpk2_5end | |||
|id=chr18:65553634..65553645,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.88e-30!18;UBERON:0000948!5.88e-30!18;UBERON:0005498!5.88e-30!18;UBERON:0004140!5.88e-30!18;UBERON:0009881!5.88e-30!18;UBERON:0004141!5.88e-30!18;UBERON:0003084!5.88e-30!18;UBERON:0007005!5.88e-30!18;UBERON:0004139!5.88e-30!18;UBERON:0004291!5.88e-30!18;UBERON:0004535!1.29e-22!23;UBERON:0001009!1.29e-22!23;UBERON:0004872!1.28e-14!33;UBERON:0003103!1.50e-13!43;UBERON:0003914!1.74e-10!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.75e-72,18;UBERON:0000948,5.75e-72,18;UBERON:0005498,5.75e-72,18;UBERON:0004140,5.75e-72,18;UBERON:0009881,5.75e-72,18;UBERON:0004141,5.75e-72,18;UBERON:0003084,5.75e-72,18;UBERON:0007005,5.75e-72,18;UBERON:0004139,5.75e-72,18;UBERON:0004291,5.75e-72,18;UBERON:0004535,4.76e-56,23;UBERON:0001009,4.76e-56,23;UBERON:0004872,1.16e-38,33;UBERON:0003103,2.42e-29,43;UBERON:0003914,1.01e-26,47;UBERON:0003081,1.02e-13,87;UBERON:0010314,6.98e-13,92;UBERON:0000025,4.57e-10,114;UBERON:0000926,1.78e-09,120;UBERON:0004120,1.78e-09,120;UBERON:0006603,1.78e-09,120;UBERON:0004111,2.72e-09,122;UBERON:0001048,2.68e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,3.10688658803253,2.81431271977315,2.70093092191522,3.78791576936336,4.13204886669548,2.93107514486019,2.79040733700489,2.95100741539581,4.2035523252181,2.79751744852917,3.11918181750281,3.89130285820108,3.36259971078264,2.85415149878366,3.35516046900929,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p4@Alpk2 | |||
}} |
Revision as of 00:56, 6 August 2015
Short description: | p4@Alpk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Alpk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -92bp_to_ENSMUST00000035548, NM_001037294, uc008feu.2_5end |
EntrezGene: | 225638 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.75e-72 | 18 |
heart | 5.75e-72 | 18 |
primitive heart tube | 5.75e-72 | 18 |
primary heart field | 5.75e-72 | 18 |
anterior lateral plate mesoderm | 5.75e-72 | 18 |
heart tube | 5.75e-72 | 18 |
heart primordium | 5.75e-72 | 18 |
cardiac mesoderm | 5.75e-72 | 18 |
cardiogenic plate | 5.75e-72 | 18 |
heart rudiment | 5.75e-72 | 18 |
cardiovascular system | 4.76e-56 | 23 |
circulatory system | 4.76e-56 | 23 |
splanchnic layer of lateral plate mesoderm | 1.16e-38 | 33 |
compound organ | 2.42e-29 | 43 |
epithelial tube | 1.01e-26 | 47 |
lateral plate mesoderm | 1.02e-13 | 87 |
structure with developmental contribution from neural crest | 6.98e-13 | 92 |
tube | 4.57e-10 | 114 |
mesoderm | 1.78e-09 | 120 |
mesoderm-derived structure | 1.78e-09 | 120 |
presumptive mesoderm | 1.78e-09 | 120 |
anatomical conduit | 2.72e-09 | 122 |
primordium | 2.68e-08 | 134 |