FFCP PHASE1:Mm9::chr19:14672187..14672212,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=21888|HGNC=|MCL_coexpression_id=34|UniProt=Q62441,Q9WUL2,Q62440,Q5SQA5|association_with_transcript=260bp_to_ENSMUST00000052011,NM_011600,uc008gwk.1,uc008gwl.1,uc008gwm.1_5end|description=CAGE_peak_2_at_Tle4_5end|id=chr19:14672187..14672212,-|ontology_enrichment_celltype=CL:0000988!1.61e-08!32;CL:0002032!1.61e-08!32;CL:0000037!1.61e-08!32;CL:0000566!1.61e-08!32;CL:0000837!1.61e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,4.68e-14,32;CL:0002032,4.68e-14,32;CL:0000037,4.68e-14,32;CL:0000837,4.68e-14,32;CL:0002031,1.51e-09,25;CL:0002320,1.66e-09,46;CL:0000134,1.66e-09,46;CL:0000838,3.37e-08,12;CL:0000049,5.40e-08,19;CL:0000738,1.15e-07,17;CL:0002087,1.15e-07,17;CL:0000084,2.25e-07,11;CL:0000827,2.25e-07,11;CL:0000542,2.63e-07,13;CL:0000051,2.63e-07,13;CL:0000219,8.39e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-09,46|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.467225281191051,2.58246646883153,2.53419699873,4.68129052643987,0.34243593645101,0.478632953972018,4.28001824828014,5.07038334030185,0,0.202475267389826,0,3.47008381894061,3.29074640653773,2.12194825899015,0.510259740906419,2.18440092641948,2.35079810225042,0.47997726838022,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0.756090389279792,0.221730510655305,4.44521471421742,3.69038872550742,0,0.866554859253824,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.608261587317087,0.734187008646726,0,0,0.439372365468944,0.777719596297134,0.419959264876088,0,2.68452169692378,5.07753499407941,8.06625117941913,1.02903774414379,0.286533439938757,1.03134418455488,2.02316460859598,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.414758449233911,0.540023753326763,1.05162480675691,1.14260393761521,1.10434270475807,0.244981598429908,0.575072826109418,0,0,0.255374676170375,0.153606533256243,1.18697658957174,1.64677758484337,0.52091337055676,0.558365998002762,0,0,0.589257170947335,0.284743361598206,1.3047961207771,0.151452386666368,0.226714680320357,1.15945795480671,1.72084775396277,1.3599426674155,0,0.649776417447669,0,0,0.170430322578058,0.259786004602869,0,1.69012103732017,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.5709193985953,3.10725460376606,0.445326417194474,0.867426633830679,0,0.461230994512117,0.150722640552623,1.41106448562846,0.125666591329675,0.247194967734374,0.289198713839823,0.884610551949874,0.647067399789637,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0,11.2626217035565,4.19931911695385,6.22644112658017,0.748953197024114,0.457500602818626,1.7591609295801,2.25971616249959,2.30143911597297,0.83115217823824,1.1356888414743,2.24046600470696,0.995255764880744,0.252722758433675,0.210441855886474,0.650602214813519,1.60931473103431,1.26043490863744,1.20563854268572,3.40182495756639,1.0249097622788,1.96773621575431,0,1.29340795759705,0.756424320671277,0.879755620819744,1.53437012699302,1.39023624612799,0.348252166522167,0,0.199034266818493,3.51106593656617,4.88961023517959,3.9782889915383,1.03562886267751,1.17263029990548,0,0.23674473558521,0.196764231747404,0.925602677324269,0,1.07309360559848,0.934122738937356,0.329119699826961,0.164167464079095,0.486412857275134,0.146199987425332,0.878200461164203,0.805238512562231,1.26173969138476,1.85228302282712,0,0,0.853153002140936,0.232236671860439,0.38660238396628,1.4117846723634,0.667134131534611,0.190225626112559,0,0.823494773620054,0.502670417600539,0.596869416123452,0.58489226135736,0,0.648414149624083,0.796565093017469,0.948339504765408,0.571242563048644,0,0.814605311381257,0.581857461502877,1.26244475802573,0.822074982615345,0.147610147979602,0.470996183524124,0.370191491765402,0,0.333690211432188,0.982794975566015,0,0.811440485554012,0.241177159752417,0.25462585178142,0,1.29708181420028,0.549122826376163,2.87536413054709,1.48856379067401,0,0,0.179397413521912,0,0.739012760666419,0.568474235311454,0.325929952884052,1.35796068620151,0.938760993154008,1.00503754465089,0,1.17080188714679,1.41871629695572,1.32878813789265,1.43509291791738,0.491589944147214,0.518054945597687,0.867894351489069,1.50791283939272,1.08781136763742,2.45882136509518,0.275936746304732,0.481651769963376,0.703270119553219,1.14754461763673,0.504941854408746,0.631016438832513,0,0.215423397732799,1.43381278771531,1.33679204449436,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0.178065603667255,3.58351310577867,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,1.8006109403131,1.29358683782755,0.857348140126369,0.354680467284547,0.356737635204141,0.822745103010605,2.43571959291679,0.704015124191131,0.63549621259146,0.220528398054962,0.8244312647074,0.968786560175433,0.482503399425247,0.835606408021955,0.984845398470368,0.291480836629851,0.741701208042039,1.19609616558497,0.619160603889667,0.555583582109135,0.376736914009382,1.23024804948923,1.83022538565218,7.9889862097112,9.6566502103324,7.87739850685216,0.954670618015114,0.790839983952838,1.21991680276109,0.540026704109006,0.627264888043406,0,0.269728692769641,0.661227645802687,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,0.598066184175915,0.66183396182839,0.583353565032143,0.774958940866387,0.168956125490778,2.34714477291508,0.781226309063701,1.04859344425711,0,0.864090018773596,0,0.405450430580328,0.924398614483445,1.68897069871134,1.07416017400489,1.78813219303138,2.16351809135944,0.738447635872886,1.61546319917036,1.98137697303,1.51239277705261,0.779663045918019,1.05833025804362,1.16876902181569,0.226730383615211,0,0.358855426437903,0,0.386379188064381,0.563047426353546,0.73260649706906,0.857473516316263,0.501572104035363,1.6942555278512,0.920650473014354,0,1.3748254587495,0,0,2.02506750069542,1.35096360967266,0.453142408984205,1.55328093525546,0,1.99512436700516,1.36586884603307,1.45864030240976,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,1.60459604795908,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.640251524048693,0.402048282689293,0.952587382566147,0.347652977834566,0.77163688185482,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.470546902076653,0.676916863133412,1.28049581010941,0.263069711437843,0.950628796921032,0,0.355905054372522,0.591026894253381,0.409231043169689,1.08455788830176,1.15743966588685,0,0.233931608445408,1.07435527024149,1.14772999241306,1.10295709559758,0.695603506861264|short_description=p2@Tle4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21888 | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62441,uniprot:Q9WUL2,uniprot:Q62440,uniprot:Q5SQA5 | |||
|association_with_transcript=260bp_to_ENSMUST00000052011,NM_011600,uc008gwk.1,uc008gwl.1,uc008gwm.1_5end | |||
|cluster_id=chr19:14672187..14672212,- | |||
|description=CAGE_peak_2_at_Tle4_5end | |||
|id=chr19:14672187..14672212,- | |||
|ontology_enrichment_celltype=CL:0000988!1.61e-08!32;CL:0002032!1.61e-08!32;CL:0000037!1.61e-08!32;CL:0000566!1.61e-08!32;CL:0000837!1.61e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.68e-14,32;CL:0002032,4.68e-14,32;CL:0000037,4.68e-14,32;CL:0000837,4.68e-14,32;CL:0002031,1.51e-09,25;CL:0002320,1.66e-09,46;CL:0000134,1.66e-09,46;CL:0000838,3.37e-08,12;CL:0000049,5.40e-08,19;CL:0000738,1.15e-07,17;CL:0002087,1.15e-07,17;CL:0000084,2.25e-07,11;CL:0000827,2.25e-07,11;CL:0000542,2.63e-07,13;CL:0000051,2.63e-07,13;CL:0000219,8.39e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-09,46 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.467225281191051,2.58246646883153,2.53419699873,4.68129052643987,0.34243593645101,0.478632953972018,4.28001824828014,5.07038334030185,0,0.202475267389826,0,3.47008381894061,3.29074640653773,2.12194825899015,0.510259740906419,2.18440092641948,2.35079810225042,0.47997726838022,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0.756090389279792,0.221730510655305,4.44521471421742,3.69038872550742,0,0.866554859253824,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.608261587317087,0.734187008646726,0,0,0.439372365468944,0.777719596297134,0.419959264876088,0,2.68452169692378,5.07753499407941,8.06625117941913,1.02903774414379,0.286533439938757,1.03134418455488,2.02316460859598,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.414758449233911,0.540023753326763,1.05162480675691,1.14260393761521,1.10434270475807,0.244981598429908,0.575072826109418,0,0,0.255374676170375,0.153606533256243,1.18697658957174,1.64677758484337,0.52091337055676,0.558365998002762,0,0,0.589257170947335,0.284743361598206,1.3047961207771,0.151452386666368,0.226714680320357,1.15945795480671,1.72084775396277,1.3599426674155,0,0.649776417447669,0,0,0.170430322578058,0.259786004602869,0,1.69012103732017,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.5709193985953,3.10725460376606,0.445326417194474,0.867426633830679,0,0.461230994512117,0.150722640552623,1.41106448562846,0.125666591329675,0.247194967734374,0.289198713839823,0.884610551949874,0.647067399789637,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0,11.2626217035565,4.19931911695385,6.22644112658017,0.748953197024114,0.457500602818626,1.7591609295801,2.25971616249959,2.30143911597297,0.83115217823824,1.1356888414743,2.24046600470696,0.995255764880744,0.252722758433675,0.210441855886474,0.650602214813519,1.60931473103431,1.26043490863744,1.20563854268572,3.40182495756639,1.0249097622788,1.96773621575431,0,1.29340795759705,0.756424320671277,0.879755620819744,1.53437012699302,1.39023624612799,0.348252166522167,0,0.199034266818493,3.51106593656617,4.88961023517959,3.9782889915383,1.03562886267751,1.17263029990548,0,0.23674473558521,0.196764231747404,0.925602677324269,0,1.07309360559848,0.934122738937356,0.329119699826961,0.164167464079095,0.486412857275134,0.146199987425332,0.878200461164203,0.805238512562231,1.26173969138476,1.85228302282712,0,0,0.853153002140936,0.232236671860439,0.38660238396628,1.4117846723634,0.667134131534611,0.190225626112559,0,0.823494773620054,0.502670417600539,0.596869416123452,0.58489226135736,0,0.648414149624083,0.796565093017469,0.948339504765408,0.571242563048644,0,0.814605311381257,0.581857461502877,1.26244475802573,0.822074982615345,0.147610147979602,0.470996183524124,0.370191491765402,0,0.333690211432188,0.982794975566015,0,0.811440485554012,0.241177159752417,0.25462585178142,0,1.29708181420028,0.549122826376163,2.87536413054709,1.48856379067401,0,0,0.179397413521912,0,0.739012760666419,0.568474235311454,0.325929952884052,1.35796068620151,0.938760993154008,1.00503754465089,0,1.17080188714679,1.41871629695572,1.32878813789265,1.43509291791738,0.491589944147214,0.518054945597687,0.867894351489069,1.50791283939272,1.08781136763742,2.45882136509518,0.275936746304732,0.481651769963376,0.703270119553219,1.14754461763673,0.504941854408746,0.631016438832513,0,0.215423397732799,1.43381278771531,1.33679204449436,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0.178065603667255,3.58351310577867,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,1.8006109403131,1.29358683782755,0.857348140126369,0.354680467284547,0.356737635204141,0.822745103010605,2.43571959291679,0.704015124191131,0.63549621259146,0.220528398054962,0.8244312647074,0.968786560175433,0.482503399425247,0.835606408021955,0.984845398470368,0.291480836629851,0.741701208042039,1.19609616558497,0.619160603889667,0.555583582109135,0.376736914009382,1.23024804948923,1.83022538565218,7.9889862097112,9.6566502103324,7.87739850685216,0.954670618015114,0.790839983952838,1.21991680276109,0.540026704109006,0.627264888043406,0,0.269728692769641,0.661227645802687,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,0.598066184175915,0.66183396182839,0.583353565032143,0.774958940866387,0.168956125490778,2.34714477291508,0.781226309063701,1.04859344425711,0,0.864090018773596,0,0.405450430580328,0.924398614483445,1.68897069871134,1.07416017400489,1.78813219303138,2.16351809135944,0.738447635872886,1.61546319917036,1.98137697303,1.51239277705261,0.779663045918019,1.05833025804362,1.16876902181569,0.226730383615211,0,0.358855426437903,0,0.386379188064381,0.563047426353546,0.73260649706906,0.857473516316263,0.501572104035363,1.6942555278512,0.920650473014354,0,1.3748254587495,0,0,2.02506750069542,1.35096360967266,0.453142408984205,1.55328093525546,0,1.99512436700516,1.36586884603307,1.45864030240976,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,1.60459604795908,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.640251524048693,0.402048282689293,0.952587382566147,0.347652977834566,0.77163688185482,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.470546902076653,0.676916863133412,1.28049581010941,0.263069711437843,0.950628796921032,0,0.355905054372522,0.591026894253381,0.409231043169689,1.08455788830176,1.15743966588685,0,0.233931608445408,1.07435527024149,1.14772999241306,1.10295709559758,0.695603506861264 | |||
|short_description=p2@Tle4 | |||
}} |
Revision as of 08:37, 6 August 2015
Short description: | p2@Tle4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tle4_5end |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | 260bp_to_ENSMUST00000052011, NM_011600, uc008gwk.1, uc008gwl.1, uc008gwm.1_5end |
EntrezGene: | 21888 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.68e-14 | 32 |
hematopoietic oligopotent progenitor cell | 4.68e-14 | 32 |
hematopoietic stem cell | 4.68e-14 | 32 |
hematopoietic multipotent progenitor cell | 4.68e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.51e-09 | 25 |
connective tissue cell | 1.66e-09 | 46 |
mesenchymal cell | 1.66e-09 | 46 |
lymphoid lineage restricted progenitor cell | 3.37e-08 | 12 |
common myeloid progenitor | 5.40e-08 | 19 |
leukocyte | 1.15e-07 | 17 |
nongranular leukocyte | 1.15e-07 | 17 |
T cell | 2.25e-07 | 11 |
pro-T cell | 2.25e-07 | 11 |
lymphocyte | 2.63e-07 | 13 |
common lymphoid progenitor | 2.63e-07 | 13 |
motile cell | 8.39e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.66e-09 | 46 |