FFCP PHASE1:Mm9::chr19:4498603..4498614,-: Difference between revisions
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{{FFCP|EntrezGene=69861|HGNC=|MCL_coexpression_id=12|UniProt=Q8VC23|association_with_transcript=-20bp_to_ENSMUST00000048482,NM_027237,uc008gae.1_5end|description=CAGE_peak_4_at_2010003K11Rik_5end|id=chr19:4498603..4498614,-|ontology_enrichment_celltype=CL:0000239!1.67e-07!6;CL:0000677!1.67e-07!6;CL:0000212!1.67e-07!6;CL:0000584!1.67e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.30e-12,6;CL:0000677,1.30e-12,6;CL:0000584,1.30e-12,6;CL:0000075,1.10e-10,7;CL:0000066,1.14e-09,25;CL:0002563,4.11e-08,9;CL:0002251,4.11e-08,9;CL:0000682,2.44e-07,3;CL:0000223,7.48e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.06e-11!43;UBERON:0000344!7.43e-10!15;UBERON:0005409!4.49e-09!59;UBERON:0004119!1.98e-08!130;UBERON:0000925!1.98e-08!130;UBERON:0006595!1.98e-08!130;UBERON:0001242!6.08e-08!13;UBERON:0000060!6.08e-08!13;UBERON:0001262!6.08e-08!13;UBERON:0004786!6.08e-08!13;UBERON:0004923!9.19e-08!24;UBERON:0001007!1.12e-07!128;UBERON:0001555!1.12e-07!128;UBERON:0007026!1.12e-07!128;UBERON:0009854!6.96e-07!23;UBERON:0009856!6.96e-07!23;UBERON:0002365!8.35e-07!25;UBERON:0002330!8.35e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-33,31;UBERON:0005409,4.48e-23,47;UBERON:0000344,2.85e-18,15;UBERON:0004119,2.96e-18,118;UBERON:0000925,2.96e-18,118;UBERON:0006595,2.96e-18,118;UBERON:0001007,1.37e-17,116;UBERON:0001555,1.37e-17,116;UBERON:0007026,1.37e-17,116;UBERON:0004921,1.95e-15,114;UBERON:0001242,1.19e-14,13;UBERON:0001262,1.19e-14,13;UBERON:0004786,1.19e-14,13;UBERON:0004923,3.10e-14,24;UBERON:0009854,5.95e-09,23;UBERON:0009856,5.95e-09,23;UBERON:0002108,1.99e-08,4;UBERON:0003350,4.11e-08,9;UBERON:0004808,4.11e-08,9;UBERON:0001277,4.11e-08,9;UBERON:0002107,6.84e-08,22;UBERON:0007499,6.84e-08,22;UBERON:0006925,6.84e-08,22;UBERON:0009497,6.84e-08,22;UBERON:0000015,6.84e-08,22;UBERON:0002423,6.84e-08,22;UBERON:0006235,6.84e-08,22;UBERON:0008835,6.84e-08,22;UBERON:0003894,6.84e-08,22;UBERON:0004161,6.84e-08,22;UBERON:0008836,6.84e-08,22|phase1_expression=0,6.2815573375085,8.18998630901165,6.65421264875026,9.01612313903425,3.69334398206158,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,6.23970448894286,5.73523202667925,8.6134794617253,6.03066794622705,4.52489588640367,3.80046838912748,3.02436155711917,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,8.83962733820076,1.07940638327563,3.24888208723835,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,1.65794904607885,0.117588707135705,0.502666365318702,17.5508427091405,0.86759614151947,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,10.2429822724977,7.40461586657924,0,0,0,0.403367049246685,1.77902435075896,4.1849637744763,2.37264530772256,5.92916237006439,3.51869292320377,1.79060824837036,2.33956904542944,5.39291645192533,3.8904848977445,3.58454291857861,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,1.48226313543574,0,0,0,0,0,0,0,0.972811360650212,3.29473695825698,1.43768206527355,1.48856379067401,1.24815069245824,2.27320990152401,3.04975602987251,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,5.24665505933731,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0.661227645802687,0,1.03691978633434,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0,0,0.0936415074698824,0.192075457214608,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@2010003K11Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69861 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VC23 | |||
|association_with_transcript=-20bp_to_ENSMUST00000048482,NM_027237,uc008gae.1_5end | |||
|cluster_id=chr19:4498603..4498614,- | |||
|description=CAGE_peak_4_at_2010003K11Rik_5end | |||
|id=chr19:4498603..4498614,- | |||
|ontology_enrichment_celltype=CL:0000239!1.67e-07!6;CL:0000677!1.67e-07!6;CL:0000212!1.67e-07!6;CL:0000584!1.67e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.30e-12,6;CL:0000677,1.30e-12,6;CL:0000584,1.30e-12,6;CL:0000075,1.10e-10,7;CL:0000066,1.14e-09,25;CL:0002563,4.11e-08,9;CL:0002251,4.11e-08,9;CL:0000682,2.44e-07,3;CL:0000223,7.48e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.06e-11!43;UBERON:0000344!7.43e-10!15;UBERON:0005409!4.49e-09!59;UBERON:0004119!1.98e-08!130;UBERON:0000925!1.98e-08!130;UBERON:0006595!1.98e-08!130;UBERON:0001242!6.08e-08!13;UBERON:0000060!6.08e-08!13;UBERON:0001262!6.08e-08!13;UBERON:0004786!6.08e-08!13;UBERON:0004923!9.19e-08!24;UBERON:0001007!1.12e-07!128;UBERON:0001555!1.12e-07!128;UBERON:0007026!1.12e-07!128;UBERON:0009854!6.96e-07!23;UBERON:0009856!6.96e-07!23;UBERON:0002365!8.35e-07!25;UBERON:0002330!8.35e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-33,31;UBERON:0005409,4.48e-23,47;UBERON:0000344,2.85e-18,15;UBERON:0004119,2.96e-18,118;UBERON:0000925,2.96e-18,118;UBERON:0006595,2.96e-18,118;UBERON:0001007,1.37e-17,116;UBERON:0001555,1.37e-17,116;UBERON:0007026,1.37e-17,116;UBERON:0004921,1.95e-15,114;UBERON:0001242,1.19e-14,13;UBERON:0001262,1.19e-14,13;UBERON:0004786,1.19e-14,13;UBERON:0004923,3.10e-14,24;UBERON:0009854,5.95e-09,23;UBERON:0009856,5.95e-09,23;UBERON:0002108,1.99e-08,4;UBERON:0003350,4.11e-08,9;UBERON:0004808,4.11e-08,9;UBERON:0001277,4.11e-08,9;UBERON:0002107,6.84e-08,22;UBERON:0007499,6.84e-08,22;UBERON:0006925,6.84e-08,22;UBERON:0009497,6.84e-08,22;UBERON:0000015,6.84e-08,22;UBERON:0002423,6.84e-08,22;UBERON:0006235,6.84e-08,22;UBERON:0008835,6.84e-08,22;UBERON:0003894,6.84e-08,22;UBERON:0004161,6.84e-08,22;UBERON:0008836,6.84e-08,22 | |||
|phase1_expression=0,6.2815573375085,8.18998630901165,6.65421264875026,9.01612313903425,3.69334398206158,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,6.23970448894286,5.73523202667925,8.6134794617253,6.03066794622705,4.52489588640367,3.80046838912748,3.02436155711917,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,8.83962733820076,1.07940638327563,3.24888208723835,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,1.65794904607885,0.117588707135705,0.502666365318702,17.5508427091405,0.86759614151947,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,10.2429822724977,7.40461586657924,0,0,0,0.403367049246685,1.77902435075896,4.1849637744763,2.37264530772256,5.92916237006439,3.51869292320377,1.79060824837036,2.33956904542944,5.39291645192533,3.8904848977445,3.58454291857861,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,1.48226313543574,0,0,0,0,0,0,0,0.972811360650212,3.29473695825698,1.43768206527355,1.48856379067401,1.24815069245824,2.27320990152401,3.04975602987251,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,5.24665505933731,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0.661227645802687,0,1.03691978633434,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0,0,0.0936415074698824,0.192075457214608,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@2010003K11Rik | |||
}} |
Revision as of 04:34, 4 August 2015
Short description: | p4@2010003K11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2010003K11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -20bp_to_ENSMUST00000048482, NM_027237, uc008gae.1_5end |
EntrezGene: | 69861 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.30e-12 | 6 |
gut absorptive cell | 1.30e-12 | 6 |
enterocyte | 1.30e-12 | 6 |
columnar/cuboidal epithelial cell | 1.10e-10 | 7 |
epithelial cell | 1.14e-09 | 25 |
intestinal epithelial cell | 4.11e-08 | 9 |
epithelial cell of alimentary canal | 4.11e-08 | 9 |
M cell of gut | 2.44e-07 | 3 |
endodermal cell | 7.48e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.47e-33 | 31 |
gastrointestinal system | 4.48e-23 | 47 |
mucosa | 2.85e-18 | 15 |
endoderm-derived structure | 2.96e-18 | 118 |
endoderm | 2.96e-18 | 118 |
presumptive endoderm | 2.96e-18 | 118 |
digestive system | 1.37e-17 | 116 |
digestive tract | 1.37e-17 | 116 |
primitive gut | 1.37e-17 | 116 |
subdivision of digestive tract | 1.95e-15 | 114 |
intestinal mucosa | 1.19e-14 | 13 |
wall of intestine | 1.19e-14 | 13 |
gastrointestinal system mucosa | 1.19e-14 | 13 |
organ component layer | 3.10e-14 | 24 |
digestive tract diverticulum | 5.95e-09 | 23 |
sac | 5.95e-09 | 23 |
small intestine | 1.99e-08 | 4 |
epithelium of mucosa | 4.11e-08 | 9 |
gastrointestinal system epithelium | 4.11e-08 | 9 |
intestinal epithelium | 4.11e-08 | 9 |
liver | 6.84e-08 | 22 |
epithelial sac | 6.84e-08 | 22 |
digestive gland | 6.84e-08 | 22 |
epithelium of foregut-midgut junction | 6.84e-08 | 22 |
anatomical boundary | 6.84e-08 | 22 |
hepatobiliary system | 6.84e-08 | 22 |
foregut-midgut junction | 6.84e-08 | 22 |
hepatic diverticulum | 6.84e-08 | 22 |
liver primordium | 6.84e-08 | 22 |
septum transversum | 6.84e-08 | 22 |
liver bud | 6.84e-08 | 22 |