FFCP PHASE1:Mm9::chr19:56622925..56623002,+: Difference between revisions
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{{FFCP|EntrezGene=66866|HGNC=|UniProt=Q8BZW8,F6ZR71,B2RR26|association_with_transcript=174bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end|description=CAGE_peak_1_at_Nhlrc2_5end|id=chr19:56622925..56623002,+|ontology_enrichment_celltype=CL:0000988!9.96e-08!32;CL:0002032!9.96e-08!32;CL:0000037!9.96e-08!32;CL:0000566!9.96e-08!32;CL:0000837!9.96e-08!32;CL:0002031!3.11e-07!25;CL:0000050!7.33e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,9.92e-08,32;CL:0002032,9.92e-08,32;CL:0000037,9.92e-08,32;CL:0000837,9.92e-08,32;CL:0002031,3.10e-07,25;CL:0000050,7.31e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!1.24e-09!147;UBERON:0004177!4.11e-09!29;UBERON:0003081!2.12e-07!88;UBERON:0002390!2.51e-07!45;UBERON:0003061!2.51e-07!45;UBERON:0000153!6.50e-07!94;UBERON:0003408!9.01e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.70e-11,43;UBERON:0007811,1.14e-10,36;UBERON:0001048,1.21e-10,134;UBERON:0004177,3.47e-09,29;UBERON:0005057,3.47e-09,29;UBERON:0000926,5.21e-08,120;UBERON:0004120,5.21e-08,120;UBERON:0006603,5.21e-08,120;UBERON:0002390,2.45e-07,45;UBERON:0003061,2.45e-07,45;UBERON:0003081,3.75e-07,87;UBERON:0003408,7.73e-07,24;UBERON:0002370,8.87e-07,23;UBERON:0000974,8.87e-07,23;UBERON:0004807,8.87e-07,23;UBERON:0005058,8.87e-07,23;UBERON:0003351,8.87e-07,23;UBERON:0009113,8.87e-07,23;UBERON:0003295,8.87e-07,23;UBERON:0009722,8.87e-07,23;UBERON:0005562,8.87e-07,23;UBERON:0007690,8.87e-07,23|phase1_expression=12.0111635328595,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,18.0772652818207,10.6999428835267,9.12851652655775,14.7247452673934,18.1082800919414,17.462474452983,14.0746847894586,14.3237197580735,15.1856450542369,22.3859801001007,14.8267217718372,16.5908464662944,16.9755860719212,5.44277056966847,5.75887516965135,7.31359409589019,1.75991665072747,2.2940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.886922042621219,12.065582795733,14.7615549020297,15.8481681015439,0.866554859253824,0.498703936075477,0.204169356262369,17.5783284909501,4.6880120671428,16.2292360631877,9.99993529652724,18.442228093878,14.0798002379035,2.01434908760924,2.43304634926835,5.32285581268876,2.34717403304412,5.66865406589161,3.95435128922049,4.27745777963423,4.89952475688769,2.87505128729943,12.5836954543302,10.8804321301702,12.0993767691287,1.54355661621568,1.43266719969378,4.12537673821954,5.86717736492834,5.81890077199236,6.97214543856797,1.69422266034566,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,3.59520132622086,3.84218305321555,8.91730665852908,7.02030879324791,8.83364837675805,3.99911378165325,3.75476519617743,6.1245399607477,12.4599112323707,9.19218786610021,11.0115880999389,4.59674417106676,5.9906547969935,7.91317726381163,7.86793734980723,3.12548022334056,5.02529398202486,2.25105044012672,4.12555268997387,5.00868595305235,5.26775218956681,5.21918448310842,6.58817881998701,4.53429360640713,6.08715426273523,1.72084775396277,1.3599426674155,0,0,0,5.47733238513832,3.91989741929533,3.11743205523443,2.82671659608272,12.6759077799012,1.28326477414318,0,0,3.24736561516821,3.80039798212648,2.52762222507392,1.59857431606684,10.3575153458869,6.67989625791711,7.11289839741157,3.04465478312141,3.92046345335299,5.57673770044703,7.2904998424137,3.76999773989026,3.46072954828123,5.92857363371638,9.73071607144862,6.95597454773859,11.4837589599405,7.27312879702833,0,11.7112318804619,12.5668024088073,1.27728527604296,10.543730956521,5.99902730993408,11.817531117795,5.69204429738326,7.32000964509802,6.28271760564322,6.25767552692195,4.60287823194595,4.98691306942944,4.70499662896497,8.24898847187562,6.09594155989456,5.30717792710717,10.3116509384372,9.10843100738926,9.19608417733892,10.6236656585156,12.6592046982001,15.4442853073514,12.5551445879153,12.6497328155634,9.05461797586555,7.97601573851516,13.0483195315795,8.97350733236139,7.01426343768239,6.95118123063995,10.447564995665,7.20237477427802,8.7575077400137,5.61770549850588,10.2939162845886,6.25159698670304,6.62802472113606,7.97388603935727,7.56260658136262,9.46978942340841,10.231740050865,8.17615698303105,10.4640275137684,10.4626626545851,9.22446204700639,10.3672705445493,8.04420573987567,10.3768076218695,8.91819923294527,7.90380415047782,9.26024289446565,6.30869845692382,6.5858951922742,2.31293148088659,1.05780226665418,11.5175655289026,9.52170354627798,6.95884291139304,5.84882221407693,4.22518283305254,3.61428689613862,0.949058123089023,2.30578536613615,5.02670417600539,3.58121649674071,2.33956904542944,1.79763881730844,2.16138049874694,1.7922714592893,6.44870863240478,6.85491075658373,6.76246414038483,5.09128319613286,8.14600446104028,9.88915060453492,7.14572869504107,4.87113488332687,3.767969468193,2.46794327843601,0.592905254174298,11.1786220829783,10.8107447312262,13.4917267430912,13.7944882544182,9.88826354984909,6.62027214631691,7.48009957372108,7.45822043165163,3.84385978463314,0,2.60498663367952,4.05648975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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66866 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BZW8,uniprot:F6ZR71,uniprot:B2RR26 | |||
|association_with_transcript=174bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end | |||
|cluster_id=chr19:56622925..56623002,+ | |||
|description=CAGE_peak_1_at_Nhlrc2_5end | |||
|id=chr19:56622925..56623002,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.96e-08!32;CL:0002032!9.96e-08!32;CL:0000037!9.96e-08!32;CL:0000566!9.96e-08!32;CL:0000837!9.96e-08!32;CL:0002031!3.11e-07!25;CL:0000050!7.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.92e-08,32;CL:0002032,9.92e-08,32;CL:0000037,9.92e-08,32;CL:0000837,9.92e-08,32;CL:0002031,3.10e-07,25;CL:0000050,7.31e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.24e-09!147;UBERON:0004177!4.11e-09!29;UBERON:0003081!2.12e-07!88;UBERON:0002390!2.51e-07!45;UBERON:0003061!2.51e-07!45;UBERON:0000153!6.50e-07!94;UBERON:0003408!9.01e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.70e-11,43;UBERON:0007811,1.14e-10,36;UBERON:0001048,1.21e-10,134;UBERON:0004177,3.47e-09,29;UBERON:0005057,3.47e-09,29;UBERON:0000926,5.21e-08,120;UBERON:0004120,5.21e-08,120;UBERON:0006603,5.21e-08,120;UBERON:0002390,2.45e-07,45;UBERON:0003061,2.45e-07,45;UBERON:0003081,3.75e-07,87;UBERON:0003408,7.73e-07,24;UBERON:0002370,8.87e-07,23;UBERON:0000974,8.87e-07,23;UBERON:0004807,8.87e-07,23;UBERON:0005058,8.87e-07,23;UBERON:0003351,8.87e-07,23;UBERON:0009113,8.87e-07,23;UBERON:0003295,8.87e-07,23;UBERON:0009722,8.87e-07,23;UBERON:0005562,8.87e-07,23;UBERON:0007690,8.87e-07,23 | |||
|phase1_expression=12.0111635328595,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,18.0772652818207,10.6999428835267,9.12851652655775,14.7247452673934,18.1082800919414,17.462474452983,14.0746847894586,14.3237197580735,15.1856450542369,22.3859801001007,14.8267217718372,16.5908464662944,16.9755860719212,5.44277056966847,5.75887516965135,7.31359409589019,1.75991665072747,2.2940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.886922042621219,12.065582795733,14.7615549020297,15.8481681015439,0.866554859253824,0.498703936075477,0.204169356262369,17.5783284909501,4.6880120671428,16.2292360631877,9.99993529652724,18.442228093878,14.0798002379035,2.01434908760924,2.43304634926835,5.32285581268876,2.34717403304412,5.66865406589161,3.95435128922049,4.27745777963423,4.89952475688769,2.87505128729943,12.5836954543302,10.8804321301702,12.0993767691287,1.54355661621568,1.43266719969378,4.12537673821954,5.86717736492834,5.81890077199236,6.97214543856797,1.69422266034566,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,3.59520132622086,3.84218305321555,8.91730665852908,7.02030879324791,8.83364837675805,3.99911378165325,3.75476519617743,6.1245399607477,12.4599112323707,9.19218786610021,11.0115880999389,4.59674417106676,5.9906547969935,7.91317726381163,7.86793734980723,3.12548022334056,5.02529398202486,2.25105044012672,4.12555268997387,5.00868595305235,5.26775218956681,5.21918448310842,6.58817881998701,4.53429360640713,6.08715426273523,1.72084775396277,1.3599426674155,0,0,0,5.47733238513832,3.91989741929533,3.11743205523443,2.82671659608272,12.6759077799012,1.28326477414318,0,0,3.24736561516821,3.80039798212648,2.52762222507392,1.59857431606684,10.3575153458869,6.67989625791711,7.11289839741157,3.04465478312141,3.92046345335299,5.57673770044703,7.2904998424137,3.76999773989026,3.46072954828123,5.92857363371638,9.73071607144862,6.95597454773859,11.4837589599405,7.27312879702833,0,11.7112318804619,12.5668024088073,1.27728527604296,10.543730956521,5.99902730993408,11.817531117795,5.69204429738326,7.32000964509802,6.28271760564322,6.25767552692195,4.60287823194595,4.98691306942944,4.70499662896497,8.24898847187562,6.09594155989456,5.30717792710717,10.3116509384372,9.10843100738926,9.19608417733892,10.6236656585156,12.6592046982001,15.4442853073514,12.5551445879153,12.6497328155634,9.05461797586555,7.97601573851516,13.0483195315795,8.97350733236139,7.01426343768239,6.95118123063995,10.447564995665,7.20237477427802,8.7575077400137,5.61770549850588,10.2939162845886,6.25159698670304,6.62802472113606,7.97388603935727,7.56260658136262,9.46978942340841,10.231740050865,8.17615698303105,10.4640275137684,10.4626626545851,9.22446204700639,10.3672705445493,8.04420573987567,10.3768076218695,8.91819923294527,7.90380415047782,9.26024289446565,6.30869845692382,6.5858951922742,2.31293148088659,1.05780226665418,11.5175655289026,9.52170354627798,6.95884291139304,5.84882221407693,4.22518283305254,3.61428689613862,0.949058123089023,2.30578536613615,5.02670417600539,3.58121649674071,2.33956904542944,1.79763881730844,2.16138049874694,1.7922714592893,6.44870863240478,6.85491075658373,6.76246414038483,5.09128319613286,8.14600446104028,9.88915060453492,7.14572869504107,4.87113488332687,3.767969468193,2.46794327843601,0.592905254174298,11.1786220829783,10.8107447312262,13.4917267430912,13.7944882544182,9.88826354984909,6.62027214631691,7.48009957372108,7.45822043165163,3.84385978463314,0,2.60498663367952,4.05648975048929,0.757736633841335,1.07638448113147,0.964887042726734,5.35784251483154,7.39016505904891,9.28900365719548,8.65699937453459,8.44884893838608,9.21284415929987,8.33152743101048,10.1469496886055,10.0886492227962,9.08005227559977,9.56728611944923,5.07976275618788,7.08008425650172,5.06271705035291,3.01582567878545,2.71952841909355,3.44234991113325,5.51873492609465,7.22477654945064,4.92289083687253,2.13115428989678,7.32165688892682,5.04813151066011,3.90438744296638,3.87762115919038,8.36390792833932,4.45597348164788,5.66153061577665,2.42886421004937,4.09158201075837,6.7198922250909,8.67567554338879,7.2389443456217,6.94455854302295,11.0763132360432,7.09371528781903,9.2921596837974,7.76898035695941,5.13950046840077,4.14931175462976,5.02013217897314,6.45613810682248,5.16856586336442,5.45300594216258,6.41695281092498,4.74055136903724,6.32511651449993,4.12542172992747,12.9367050186439,7.0223826672211,8.02023839453078,7.93047029616891,10.8177542521787,8.74007206250146,7.40470592709544,6.69822888052118,2.81606049676452,1.69465656691056,4.85162475720916,8.57408515295696,10.0107944551461,8.68506118965444,8.11731939221328,4.59594519286172,2.04036585640896,8.71498919449395,12.815316059839,9.70018279427146,9.63011542322501,11.8672127912955,16.8133900096861,13.7266903923914,10.538662659619,11.3360676382163,13.4053974590291,1.90934123603023,10.1227517945963,7.9294592179471,6.80433647177348,6.690825472463,3.27543845619266,5.93403124093211,8.18269211680826,3.66458318777641,1.94422459937689,8.077411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| |||
|short_description=p1@Nhlrc2 | |||
}} |
Revision as of 09:22, 4 August 2015
Short description: | p1@Nhlrc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nhlrc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 174bp_to_ENSMUST00000071423, ENSMUST00000165411, NM_025811, uc008hzc.1_5end |
EntrezGene: | 66866 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.92e-08 | 32 |
hematopoietic oligopotent progenitor cell | 9.92e-08 | 32 |
hematopoietic stem cell | 9.92e-08 | 32 |
hematopoietic multipotent progenitor cell | 9.92e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 3.10e-07 | 25 |
megakaryocyte-erythroid progenitor cell | 7.31e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.70e-11 | 43 |
craniocervical region | 1.14e-10 | 36 |
primordium | 1.21e-10 | 134 |
hemopoietic organ | 3.47e-09 | 29 |
immune organ | 3.47e-09 | 29 |
mesoderm | 5.21e-08 | 120 |
mesoderm-derived structure | 5.21e-08 | 120 |
presumptive mesoderm | 5.21e-08 | 120 |
hematopoietic system | 2.45e-07 | 45 |
blood island | 2.45e-07 | 45 |
lateral plate mesoderm | 3.75e-07 | 87 |
gland of gut | 7.73e-07 | 24 |
thymus | 8.87e-07 | 23 |
neck | 8.87e-07 | 23 |
respiratory system epithelium | 8.87e-07 | 23 |
hemolymphoid system gland | 8.87e-07 | 23 |
pharyngeal epithelium | 8.87e-07 | 23 |
thymic region | 8.87e-07 | 23 |
pharyngeal gland | 8.87e-07 | 23 |
entire pharyngeal arch endoderm | 8.87e-07 | 23 |
thymus primordium | 8.87e-07 | 23 |
early pharyngeal endoderm | 8.87e-07 | 23 |