FFCP PHASE1:Mm9::chr1:135142669..135142676,+: Difference between revisions
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{{FFCP|EntrezGene=240753|HGNC=|MCL_coexpression_id=179|UniProt=Q7TQG1,E9PVV7,E9PX43,Q69ZU4|association_with_transcript=0bp_to_ENSMUST00000038295,ENSMUST00000086504,ENSMUST00000105082,NM_001160268,NM_182930,uc007cpu.2,uc007cpv.2_5end|description=CAGE_peak_1_at_Plekha6_5end|id=chr1:135142669..135142676,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.07e-16!59;UBERON:0005172!2.49e-14!49;UBERON:0005173!2.49e-14!49;UBERON:0002417!2.49e-14!49;UBERON:0000916!2.49e-14!49;UBERON:0000160!3.47e-14!43;UBERON:0001007!5.38e-14!128;UBERON:0001555!5.38e-14!128;UBERON:0007026!5.38e-14!128;UBERON:0004119!1.53e-13!130;UBERON:0000925!1.53e-13!130;UBERON:0006595!1.53e-13!130;UBERON:0002107!1.61e-13!22;UBERON:0007499!1.61e-13!22;UBERON:0006925!1.61e-13!22;UBERON:0009497!1.61e-13!22;UBERON:0000015!1.61e-13!22;UBERON:0002423!1.61e-13!22;UBERON:0006235!1.61e-13!22;UBERON:0008835!1.61e-13!22;UBERON:0003894!1.61e-13!22;UBERON:0004161!1.61e-13!22;UBERON:0008836!1.61e-13!22;UBERON:0002365!2.07e-13!25;UBERON:0002330!2.07e-13!25;UBERON:0004921!4.16e-13!126;UBERON:0004185!4.16e-13!126;UBERON:0005177!1.05e-12!85;UBERON:0009854!2.52e-12!23;UBERON:0009856!2.52e-12!23;UBERON:0003914!1.73e-11!47;UBERON:0009569!2.63e-10!66;UBERON:0000466!5.71e-10!79;UBERON:0000481!1.75e-09!230;UBERON:0002100!1.33e-08!98;UBERON:0002108!4.50e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.52e-17,25;UBERON:0002330,1.52e-17,25;UBERON:0002107,2.82e-17,22;UBERON:0007499,2.82e-17,22;UBERON:0006925,2.82e-17,22;UBERON:0009497,2.82e-17,22;UBERON:0000015,2.82e-17,22;UBERON:0002423,2.82e-17,22;UBERON:0006235,2.82e-17,22;UBERON:0008835,2.82e-17,22;UBERON:0003894,2.82e-17,22;UBERON:0004161,2.82e-17,22;UBERON:0008836,2.82e-17,22;UBERON:0009854,4.10e-16,23;UBERON:0009856,4.10e-16,23;UBERON:0005172,1.99e-13,49;UBERON:0005173,1.99e-13,49;UBERON:0002417,1.99e-13,49;UBERON:0000916,1.99e-13,49;UBERON:0005177,5.36e-13,79;UBERON:0005409,1.33e-12,47;UBERON:0003914,1.39e-12,47;UBERON:0001007,1.69e-11,116;UBERON:0001555,1.69e-11,116;UBERON:0007026,1.69e-11,116;UBERON:0004119,5.82e-11,118;UBERON:0000925,5.82e-11,118;UBERON:0006595,5.82e-11,118;UBERON:0004921,1.48e-10,114;UBERON:0000160,3.03e-10,31;UBERON:0002100,7.13e-10,90;UBERON:0003104,3.25e-08,61;UBERON:0009142,3.25e-08,61;UBERON:0001264,3.90e-08,12;UBERON:0009569,7.58e-08,66;UBERON:0003929,2.19e-07,55;UBERON:0000949,9.40e-07,72|phase1_expression=0,2.79180326111489,1.36499771816861,1.81478526784098,1.00179145989269,6.88305014838748,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,6.07971206614945,4.81759490241057,1.14846392823004,1.29228598847722,3.878482188346,0.950117097281869,0.756090389279792,2.88249663851896,0,0,0,4.33277429626912,3.32469290716985,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.659431438650969,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,11.0148505706638,8.60423876981386,4.75979933595425,27.5248627735287,42.8852435515462,25.0895056774508,9.69066498909088,0,0,0,0,0,0,0,0,0.253359865475099,0,14.9580882431969,0,0.29688427812965,1.21439728736295,1.52232739156071,0.691846491768175,0.452167921657868,0.823120949949934,0.251333182659351,0.988779870937496,0.289198713839823,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0.758168275301024,12.2056276414155,1.30120442962704,1.14951052216736,0.540186389416048,0,0,0,0,3.88055056108524,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0,0.205782136407943,1.99034266818493,0,0,0,4.34964122324554,4.92504725960302,2.70093092191522,4.26140524053378,2.95146347621106,6.17068451549513,6.74348439776183,3.75582761959467,1.75148013550754,2.46839774870221,0.164167464079095,1.37816976227955,1.02339991197733,0.878200461164203,0.805238512562231,0,0,2.97376904685418,1.32225283331772,3.62590025909898,1.85789337488351,1.80414445850931,2.8235693447268,1.33426826306922,1.71203063501303,1.89811624617805,1.15289268306808,3.2673577144035,4.77495532898762,2.9244613067868,3.59527763461689,3.24207074812041,4.18196673834171,1.70701110857774,1.82797620175566,5.63538678365402,3.66572390121566,5.43066964069352,3.71719845418688,11.0031574596208,29.5220295959204,34.2257226694197,29.7387165051539,31.4239784712378,1.16791574001266,2.75182593158484,1.79889689907883,3.04290182082754,6.27060615356284,4.83789118384698,6.90470729881945,9.24170792617702,10.9824565275233,15.814502718009,21.2120340171047,23.7148631567066,49.0003023217397,25.1156378930677,37.1481511449793,0.369506380333209,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,0.502518772325447,0,0,0.315270288212382,0,0.318909537314974,0.983179888294428,0.345369963731791,0.433947175744535,0,0,5.90117127622843,6.62248191131358,0,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0,0,0,0,0,0,0,0.709700426041343,1.06839362200353,0.488660878060728,2.47455184458803,3.98235415019888,3.39892890616974,3.93020624054176,4.90373207365335,5.31543407185391,3.68922177532713,2.32585463851399,6.5436071305951,6.77345018930971,11.6933600436252,2.10837217149998,7.21948802737308,1.36175842301515,0.36012218806262,0.776152102696527,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0.42366414172764,1.10264199027481,0,0,0,0,0.164140899745061,4.66369338607761,0,0,2.47664241555867,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,8.59203556213602,1.89801596148681,2.64315307264903,3.13215488383224,2.92723614420256,4.58561383866973,2.83215127408124,7.52146447100557,10.7319936213452,1.94422459937689,0,0,2.39226473670366,1.32366792365678,0.972255941720238,1.03327858782185,1.01373675294467,0.234714477291508,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.375364950902364,2.01466786693992,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,1.59609949360412,1.19513524027894,0.972426868273176,1.04806581313991,0.367687016900028,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.842773567228942,0.960377286073039,0.804096565378586,0,0.579421629724277,1.35036454324594,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.930760686808441,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.985044823755635,0,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,1.50409737833809,0,0.220591419119515,0|short_description=p1@Plekha6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:240753 | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TQG1,uniprot:E9PVV7,uniprot:E9PX43,uniprot:Q69ZU4 | |||
|association_with_transcript=0bp_to_ENSMUST00000038295,ENSMUST00000086504,ENSMUST00000105082,NM_001160268,NM_182930,uc007cpu.2,uc007cpv.2_5end | |||
|cluster_id=chr1:135142669..135142676,+ | |||
|description=CAGE_peak_1_at_Plekha6_5end | |||
|id=chr1:135142669..135142676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.07e-16!59;UBERON:0005172!2.49e-14!49;UBERON:0005173!2.49e-14!49;UBERON:0002417!2.49e-14!49;UBERON:0000916!2.49e-14!49;UBERON:0000160!3.47e-14!43;UBERON:0001007!5.38e-14!128;UBERON:0001555!5.38e-14!128;UBERON:0007026!5.38e-14!128;UBERON:0004119!1.53e-13!130;UBERON:0000925!1.53e-13!130;UBERON:0006595!1.53e-13!130;UBERON:0002107!1.61e-13!22;UBERON:0007499!1.61e-13!22;UBERON:0006925!1.61e-13!22;UBERON:0009497!1.61e-13!22;UBERON:0000015!1.61e-13!22;UBERON:0002423!1.61e-13!22;UBERON:0006235!1.61e-13!22;UBERON:0008835!1.61e-13!22;UBERON:0003894!1.61e-13!22;UBERON:0004161!1.61e-13!22;UBERON:0008836!1.61e-13!22;UBERON:0002365!2.07e-13!25;UBERON:0002330!2.07e-13!25;UBERON:0004921!4.16e-13!126;UBERON:0004185!4.16e-13!126;UBERON:0005177!1.05e-12!85;UBERON:0009854!2.52e-12!23;UBERON:0009856!2.52e-12!23;UBERON:0003914!1.73e-11!47;UBERON:0009569!2.63e-10!66;UBERON:0000466!5.71e-10!79;UBERON:0000481!1.75e-09!230;UBERON:0002100!1.33e-08!98;UBERON:0002108!4.50e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.52e-17,25;UBERON:0002330,1.52e-17,25;UBERON:0002107,2.82e-17,22;UBERON:0007499,2.82e-17,22;UBERON:0006925,2.82e-17,22;UBERON:0009497,2.82e-17,22;UBERON:0000015,2.82e-17,22;UBERON:0002423,2.82e-17,22;UBERON:0006235,2.82e-17,22;UBERON:0008835,2.82e-17,22;UBERON:0003894,2.82e-17,22;UBERON:0004161,2.82e-17,22;UBERON:0008836,2.82e-17,22;UBERON:0009854,4.10e-16,23;UBERON:0009856,4.10e-16,23;UBERON:0005172,1.99e-13,49;UBERON:0005173,1.99e-13,49;UBERON:0002417,1.99e-13,49;UBERON:0000916,1.99e-13,49;UBERON:0005177,5.36e-13,79;UBERON:0005409,1.33e-12,47;UBERON:0003914,1.39e-12,47;UBERON:0001007,1.69e-11,116;UBERON:0001555,1.69e-11,116;UBERON:0007026,1.69e-11,116;UBERON:0004119,5.82e-11,118;UBERON:0000925,5.82e-11,118;UBERON:0006595,5.82e-11,118;UBERON:0004921,1.48e-10,114;UBERON:0000160,3.03e-10,31;UBERON:0002100,7.13e-10,90;UBERON:0003104,3.25e-08,61;UBERON:0009142,3.25e-08,61;UBERON:0001264,3.90e-08,12;UBERON:0009569,7.58e-08,66;UBERON:0003929,2.19e-07,55;UBERON:0000949,9.40e-07,72 | |||
|phase1_expression=0,2.79180326111489,1.36499771816861,1.81478526784098,1.00179145989269,6.88305014838748,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,6.07971206614945,4.81759490241057,1.14846392823004,1.29228598847722,3.878482188346,0.950117097281869,0.756090389279792,2.88249663851896,0,0,0,4.33277429626912,3.32469290716985,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.659431438650969,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,11.0148505706638,8.60423876981386,4.75979933595425,27.5248627735287,42.8852435515462,25.0895056774508,9.69066498909088,0,0,0,0,0,0,0,0,0.253359865475099,0,14.9580882431969,0,0.29688427812965,1.21439728736295,1.52232739156071,0.691846491768175,0.452167921657868,0.823120949949934,0.251333182659351,0.988779870937496,0.289198713839823,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0.758168275301024,12.2056276414155,1.30120442962704,1.14951052216736,0.540186389416048,0,0,0,0,3.88055056108524,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0,0.205782136407943,1.99034266818493,0,0,0,4.34964122324554,4.92504725960302,2.70093092191522,4.26140524053378,2.95146347621106,6.17068451549513,6.74348439776183,3.75582761959467,1.75148013550754,2.46839774870221,0.164167464079095,1.37816976227955,1.02339991197733,0.878200461164203,0.805238512562231,0,0,2.97376904685418,1.32225283331772,3.62590025909898,1.85789337488351,1.80414445850931,2.8235693447268,1.33426826306922,1.71203063501303,1.89811624617805,1.15289268306808,3.2673577144035,4.77495532898762,2.9244613067868,3.59527763461689,3.24207074812041,4.18196673834171,1.70701110857774,1.82797620175566,5.63538678365402,3.66572390121566,5.43066964069352,3.71719845418688,11.0031574596208,29.5220295959204,34.2257226694197,29.7387165051539,31.4239784712378,1.16791574001266,2.75182593158484,1.79889689907883,3.04290182082754,6.27060615356284,4.83789118384698,6.90470729881945,9.24170792617702,10.9824565275233,15.814502718009,21.2120340171047,23.7148631567066,49.0003023217397,25.1156378930677,37.1481511449793,0.369506380333209,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,0.502518772325447,0,0,0.315270288212382,0,0.318909537314974,0.983179888294428,0.345369963731791,0.433947175744535,0,0,5.90117127622843,6.62248191131358,0,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0,0,0,0,0,0,0,0.709700426041343,1.06839362200353,0.488660878060728,2.47455184458803,3.98235415019888,3.39892890616974,3.93020624054176,4.90373207365335,5.31543407185391,3.68922177532713,2.32585463851399,6.5436071305951,6.77345018930971,11.6933600436252,2.10837217149998,7.21948802737308,1.36175842301515,0.36012218806262,0.776152102696527,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0.42366414172764,1.10264199027481,0,0,0,0,0.164140899745061,4.66369338607761,0,0,2.47664241555867,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,8.59203556213602,1.89801596148681,2.64315307264903,3.13215488383224,2.92723614420256,4.58561383866973,2.83215127408124,7.52146447100557,10.7319936213452,1.94422459937689,0,0,2.39226473670366,1.32366792365678,0.972255941720238,1.03327858782185,1.01373675294467,0.234714477291508,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.375364950902364,2.01466786693992,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,1.59609949360412,1.19513524027894,0.972426868273176,1.04806581313991,0.367687016900028,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.842773567228942,0.960377286073039,0.804096565378586,0,0.579421629724277,1.35036454324594,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.930760686808441,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.985044823755635,0,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,1.50409737833809,0,0.220591419119515,0 | |||
|short_description=p1@Plekha6 | |||
}} |
Revision as of 19:21, 4 August 2015
Short description: | p1@Plekha6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plekha6_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | 0bp_to_ENSMUST00000038295, ENSMUST00000086504, ENSMUST00000105082, NM_001160268, NM_182930, uc007cpu.2, uc007cpv.2_5end |
EntrezGene: | 240753 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data