FFCP PHASE1:Hg19::chr6:180388..180400,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:180388..180400,+ | |||
|id=chr6:180388..180400,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.45e-21!24;CL:0000826!7.45e-21!24;CL:0000542!6.70e-20!53;CL:0000051!6.70e-20!53;CL:0000838!1.63e-18!52;CL:0000738!6.16e-18!140;CL:0000988!1.52e-15!182;CL:0000037!1.13e-14!172;CL:0000566!1.13e-14!172;CL:0002087!5.97e-12!119;CL:0000451!1.30e-11!10;CL:0002032!1.48e-11!165;CL:0000837!1.48e-11!165;CL:0000236!5.48e-11!14;CL:0000453!1.58e-10!5;CL:0000080!2.67e-10!6;CL:0002031!1.42e-09!124;CL:0000990!4.47e-08!8;CL:0000784!8.26e-08!3;CL:0000817!1.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.92e-24;3!CL:0000945;2.52e-19;24!CL:0000236;1.29e-14;13!CL:0000817;2.21e-09;1!CL:0000785;7.26e-09;1!CL:0000819;7.26e-09;1!CL:0000542;3.31e-07;53!CL:0000451;4.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.93e-24,3;CL:0000945,2.29e-19,24;CL:0000826,2.29e-19,24;CL:0000236,1.28e-13,14;CL:0000817,1.94e-11,3;CL:0000542,1.97e-10,53;CL:0000051,1.97e-10,53;CL:0000819,4.91e-09,1;CL:0000838,2.28e-08,52;CL:0000451,4.89e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;3.31e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.53e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.02e-12;10!DOID:12603;1.74e-09;1!DOID:0060073;7.26e-09;1!DOID:8675;7.26e-09;1!DOID:2355;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.80e-12,10;DOID:12603,1.74e-09,1;DOID:0060073,4.91e-09,1;DOID:8675,4.91e-09,1;DOID:2355,8.49e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.35e-10!15;UBERON:0000179!1.35e-10!15;UBERON:0000463!1.35e-10!15;UBERON:0004177!5.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.37e-16;2!UBERON:0005058;1.37e-16;2!UBERON:0009113;1.37e-16;2!UBERON:0004177;3.68e-07;5!UBERON:0005057;3.68e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.19e-09,4;UBERON:0005058,8.19e-09,4;UBERON:0009113,8.19e-09,4;UBERON:0003295,8.19e-09,4;UBERON:0005562,8.19e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.774672005803016,1.56386155736164,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,1.90810750907073,1.1384259382189,0,2.29363936875137,0,0.560508562981536,1.31692042387539,0,0,0,0,0.651844533267181,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,13.8324562097098,4.57595928624102,6.68623502393217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,29.3569016698636,8.22334513965736,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0.37950746544837,0,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,1.82454789215666,0.19566461893209,0,0,2.41981432097328,0,0,35.6266504012347,0,0,0,0,1.19472429772959,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,6.45500771418748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.664324201566815,0.327130788511688,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12601342508147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.902410431630081,0.0999411559249289,0,0.352894871715692,0,1.46067277649303,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0,0,0,0,2.8795905322931,6.96706738406064,0,0,0.426467963801962,0.23806443146374,1.74390056557216,18.3741154315739,0,0.0636471582781649,0.404234377916439,0,0,0.5388164241167,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.603821380773079,0.320568492303233 | |||
|short_description=p@chr6:180388..180400,+ | |||
}} |
Revision as of 09:34, 22 January 2014
Short description: | p@chr6:180388..180400, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:180388..180400, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.93e-24 | 3 |
lymphocyte of B lineage | 2.29e-19 | 24 |
pro-B cell | 2.29e-19 | 24 |
B cell | 1.28e-13 | 14 |
precursor B cell | 1.94e-11 | 3 |
lymphocyte | 1.97e-10 | 53 |
common lymphoid progenitor | 1.97e-10 | 53 |
B-1 B cell | 4.91e-09 | 1 |
lymphoid lineage restricted progenitor cell | 2.28e-08 | 52 |
dendritic cell | 4.89e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.19e-09 | 4 |
hemolymphoid system gland | 8.19e-09 | 4 |
thymic region | 8.19e-09 | 4 |
pharyngeal gland | 8.19e-09 | 4 |
thymus primordium | 8.19e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.80e-12 | 10 |
acute leukemia | 1.74e-09 | 1 |
lymphatic system cancer | 4.91e-09 | 1 |
lymphosarcoma | 4.91e-09 | 1 |
anemia | 8.49e-09 | 1 |