FFCP PHASE1:Hg19::chr6:2783611..2783617,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-114bp_to_U56249_5end | |||
|coexpression_cluster_id=C559 | |||
|description=CAGE_peak_5_at_U56249_5end | |||
|id=chr6:2783611..2783617,+ | |||
|ontology_enrichment_celltype=CL:0002575!4.66e-21!2;CL:0000188!1.03e-18!9;CL:0000669!2.97e-09!5;CL:0002274!3.49e-09!5;CL:0000457!3.49e-09!5;CL:0002191!3.49e-09!5;CL:0000097!3.49e-09!5;CL:0000831!3.49e-09!5;CL:0002028!3.49e-09!5;CL:0000183!7.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000188;9.75e-45;9!CL:0000393;3.68e-09;61!CL:0000211;3.68e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,9.75e-45,9;CL:0000187,1.83e-08,55;CL:0000680,4.33e-08,58;CL:0000056,4.33e-08,58;CL:0000355,4.33e-08,58;CL:0000393,9.44e-08,61;CL:0000211,9.44e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000355;3.40e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.83e-14!3;UBERON:0001033!1.83e-14!3;UBERON:0010056!1.83e-14!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.63e-26;16!UBERON:0002036;7.63e-26;16!UBERON:0002385;1.83e-13;31!UBERON:0001015;1.83e-13;31!UBERON:0000383;1.83e-13;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-07,62;UBERON:0002036,1.20e-07,62;UBERON:0003082,1.20e-07,62;UBERON:0002385,1.91e-07,64;UBERON:0001015,1.91e-07,64;UBERON:0000383,1.91e-07,64;UBERON:0002329,7.93e-07,71;UBERON:0003059,7.93e-07,71;UBERON:0007282,7.93e-07,71;UBERON:0004290,7.93e-07,71;UBERON:0009618,7.93e-07,71;UBERON:0003077,9.51e-07,72;UBERON:0007285,9.51e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51343867559517,0,0,0,0,0,0,1.95870478422822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@U56249 | |||
}} |
Revision as of 09:38, 22 January 2014
Short description: | p5@U56249 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_U56249_5end |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | -114bp_to_U56249_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 9.75e-45 | 9 |
muscle cell | 1.83e-08 | 55 |
muscle precursor cell | 4.33e-08 | 58 |
myoblast | 4.33e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.33e-08 | 58 |
electrically responsive cell | 9.44e-08 | 61 |
electrically active cell | 9.44e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.20e-07 | 62 |
striated muscle tissue | 1.20e-07 | 62 |
myotome | 1.20e-07 | 62 |
muscle tissue | 1.91e-07 | 64 |
musculature | 1.91e-07 | 64 |
musculature of body | 1.91e-07 | 64 |
somite | 7.93e-07 | 71 |
presomitic mesoderm | 7.93e-07 | 71 |
presumptive segmental plate | 7.93e-07 | 71 |
dermomyotome | 7.93e-07 | 71 |
trunk paraxial mesoderm | 7.93e-07 | 71 |
paraxial mesoderm | 9.51e-07 | 72 |
presumptive paraxial mesoderm | 9.51e-07 | 72 |