FFCP PHASE1:Hg19::chr6:75893192..75893204,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr6:75893192..75893204,- | |||
|id=chr6:75893192..75893204,- | |||
|ontology_enrichment_celltype=CL:0002620!1.85e-16!23;CL:0000057!4.45e-15!75;CL:0000055!3.20e-14!180;CL:0000048!2.29e-09!430;CL:0000723!2.82e-09!436;CL:0000499!2.82e-09!27;CL:0000034!1.19e-08!444;CL:0000153!1.72e-08!9;CL:0000447!1.72e-08!9;CL:0002320!2.74e-08!365;CL:0000134!1.29e-07!358;CL:0002334!3.38e-07!12;CL:0000548!5.58e-07!679;CL:0000004!5.58e-07!679;CL:0000255!5.58e-07!679;CL:0000667!5.97e-07!6;CL:0000058!5.97e-07!6;CL:0000138!5.97e-07!6;CL:0000012!8.51e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.70e-21;3!CL:0000153;2.80e-18;9!CL:0000447;2.80e-18;9!CL:0002617;4.55e-15;2!CL:0002334;3.64e-14;12!CL:0002620;2.27e-13;23!CL:0000327;6.64e-11;15!CL:0000499;1.01e-10;28!CL:0000138;1.69e-10;6!CL:0002579;5.86e-10;3!CL:0000214;7.50e-10;3!CL:0000135;1.22e-09;3!CL:0000388;1.22e-09;3!CL:0000136;6.93e-09;13!CL:0002616;1.71e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.70e-21,3;CL:0000153,3.02e-18,9;CL:0000447,3.02e-18,9;CL:0000057,7.46e-17,76;CL:0002617,4.56e-15,2;CL:0002334,3.50e-14,12;CL:0002620,2.01e-13,23;CL:0000136,2.21e-11,15;CL:0000327,6.94e-11,15;CL:0000499,9.31e-11,28;CL:0000058,1.99e-10,6;CL:0000138,1.99e-10,6;CL:0002579,5.49e-10,3;CL:0000214,6.57e-10,3;CL:0000135,8.97e-10,3;CL:0000388,8.97e-10,3;CL:0000134,6.25e-09,354;CL:0002320,1.16e-08,361;CL:0002616,1.65e-08,1;CL:0000219,1.05e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.17e-08!5;DOID:450!1.17e-08!5;DOID:66!1.17e-08!5;DOID:423!1.17e-08!5;DOID:0080000!1.17e-08!5;DOID:11722!1.17e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.14e-21;5!DOID:450;1.14e-21;5!DOID:66;1.14e-21;5!DOID:423;1.14e-21;5!DOID:0080000;1.14e-21;5!DOID:11722;1.14e-21;5!DOID:3369;3.57e-08;1!DOID:4235;7.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.23e-21,5;DOID:450,1.23e-21,5;DOID:66,1.23e-21,5;DOID:423,1.23e-21,5;DOID:0080000,1.23e-21,5;DOID:11722,1.23e-21,5;DOID:3369,2.90e-08,1;DOID:4235,1.06e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.06e-10!40;UBERON:0003688!4.56e-10!6;UBERON:0002358!4.56e-10!6;UBERON:0003684!4.56e-10!6;UBERON:0001178!4.56e-10!6;UBERON:0002199!1.60e-09!45;UBERON:0002416!1.60e-09!45;UBERON:0002384!2.32e-08!375;UBERON:0004457!6.14e-08!12;UBERON:0000042!6.14e-08!12;UBERON:0003102!6.15e-08!95;UBERON:0002118!5.75e-07!5;UBERON:0004532!5.75e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.04e-18;9!UBERON:0000042;1.04e-18;9!UBERON:0000310;2.56e-17;10!UBERON:0001443;9.99e-16;11!UBERON:0003688;6.90e-11;6!UBERON:0002358;6.90e-11;6!UBERON:0003684;6.90e-11;6!UBERON:0001178;6.90e-11;6!UBERON:0006915;7.50e-10;3!UBERON:0007616;7.50e-10;3!UBERON:0002217;7.50e-10;3!UBERON:0002018;7.50e-10;3!UBERON:0007846;1.22e-09;3!UBERON:0000043;1.22e-09;3!UBERON:0007845;1.22e-09;3!UBERON:0002097;7.88e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.57e-17,10;UBERON:0001443,1.00e-15,11;UBERON:0004457,4.86e-14,12;UBERON:0000042,4.86e-14,12;UBERON:0003688,6.68e-11,6;UBERON:0002358,6.68e-11,6;UBERON:0003684,6.68e-11,6;UBERON:0001178,6.68e-11,6;UBERON:0006915,6.57e-10,3;UBERON:0007616,6.57e-10,3;UBERON:0002217,6.57e-10,3;UBERON:0002018,6.57e-10,3;UBERON:0007846,8.97e-10,3;UBERON:0000043,8.97e-10,3;UBERON:0007845,8.97e-10,3;UBERON:0002097,2.91e-09,41;UBERON:0002384,2.98e-09,371;UBERON:0002199,3.91e-08,46;UBERON:0002416,3.91e-08,46 | |||
|phase1_expression=3.08853244759946,4.92431204949261,0.704772020479856,5.00366491765652,0.893922188854576,5.23403114460221,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,1.30361867064741,0.795285947051099,2.91980922181582,0.283604451492204,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0.989067717114227,0,0,0,0.125118519871964,0,0,1.22595118319608,0.600952235626387,0.113432183160021,1.61450672119976,3.41691822109708,2.11931901159562,0.600182192168805,1.03052529238439,2.31876486041066,1.48893485065272,0.337552664482532,0.876933046450788,0.252433774244115,0.828449087780694,0.323292113637624,1.77504796258307,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,2.85486382075459,0.473107245101804,0.702848489956279,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,2.48107807818777,3.22270143904931,4.77122160536225,0.896974044789907,1.53512174720011,3.05622450172854,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,1.68886108238131,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0.333926115068718,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0.310874401165561,0.295710299979268,0.159296767163702,0,0,0,0.265841714557995,0,0.450772826991655,0,0.406870733204662,0.545545977607678,0.107410557042488,0.464033759878494,0.398095888698616,0.400027764663154,0.686791410365586,1.01024846629776,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0.537266523244462,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:75893192..75893204,- | |||
}} |
Revision as of 12:43, 22 January 2014
Short description: | p@chr6:75893192..75893204, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75893192..75893204, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.70e-21 | 3 |
GAG secreting cell | 3.02e-18 | 9 |
carbohydrate secreting cell | 3.02e-18 | 9 |
fibroblast | 7.46e-17 | 76 |
adipocyte of breast | 4.56e-15 | 2 |
preadipocyte | 3.50e-14 | 12 |
skin fibroblast | 2.01e-13 | 23 |
fat cell | 2.21e-11 | 15 |
extracellular matrix secreting cell | 6.94e-11 | 15 |
stromal cell | 9.31e-11 | 28 |
chondroblast | 1.99e-10 | 6 |
chondrocyte | 1.99e-10 | 6 |
omentum preadipocyte | 5.49e-10 | 3 |
synovial cell | 6.57e-10 | 3 |
fibrocyte | 8.97e-10 | 3 |
tendon cell | 8.97e-10 | 3 |
mesenchymal cell | 6.25e-09 | 354 |
connective tissue cell | 1.16e-08 | 361 |
perirenal adipocyte cell | 1.65e-08 | 1 |
motile cell | 1.05e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
breast | 2.57e-17 | 10 |
chest | 1.00e-15 | 11 |
cavity lining | 4.86e-14 | 12 |
serous membrane | 4.86e-14 | 12 |
omentum | 6.68e-11 | 6 |
peritoneum | 6.68e-11 | 6 |
abdominal cavity | 6.68e-11 | 6 |
visceral peritoneum | 6.68e-11 | 6 |
stratified squamous epithelium | 6.57e-10 | 3 |
layer of synovial tissue | 6.57e-10 | 3 |
synovial joint | 6.57e-10 | 3 |
synovial membrane of synovial joint | 6.57e-10 | 3 |
dense regular connective tissue | 8.97e-10 | 3 |
tendon | 8.97e-10 | 3 |
regular connective tissue | 8.97e-10 | 3 |
skin of body | 2.91e-09 | 41 |
connective tissue | 2.98e-09 | 371 |
integument | 3.91e-08 | 46 |
integumental system | 3.91e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.23e-21 | 5 |
myotonic disease | 1.23e-21 | 5 |
muscle tissue disease | 1.23e-21 | 5 |
myopathy | 1.23e-21 | 5 |
muscular disease | 1.23e-21 | 5 |
myotonic dystrophy | 1.23e-21 | 5 |
peripheral primitive neuroectodermal tumor | 2.90e-08 | 1 |
spindle cell sarcoma | 1.06e-07 | 1 |