FFCP PHASE1:Mm9::chr2:157249953..157249988,+: Difference between revisions
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{{FFCP|EntrezGene=20779|HGNC=|UniProt=Q80XU2|association_with_transcript=-27bp_to_ENSMUST00000029175_5end|description=CAGE_peak_2_at_Src_5end|id=chr2:157249953..157249988,+|ontology_enrichment_celltype=CL:0000540!5.69e-12!33;CL:0000047!5.69e-12!33;CL:0000031!5.69e-12!33;CL:0000404!5.69e-12!33;CL:0000393!1.84e-10!39;CL:0000211!1.84e-10!39;CL:0000221!2.94e-10!44;CL:0000133!2.94e-10!44;CL:0002319!3.99e-10!43;CL:0000055!1.91e-08!50;CL:0000117!8.43e-08!23;CL:0000337!8.43e-08!23;CL:0002321!4.18e-07!70;CL:0000220!4.18e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,3.27e-12,33;CL:0000047,3.27e-12,33;CL:0000031,3.27e-12,33;CL:0000404,3.27e-12,33;CL:0000221,1.63e-10,44;CL:0000133,1.63e-10,44;CL:0000393,1.78e-10,39;CL:0000211,1.78e-10,39;CL:0002319,2.22e-10,43;CL:0000117,6.04e-08,23;CL:0000337,6.04e-08,23;CL:0002321,2.40e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.97e-09!102;UBERON:0000924!5.97e-09!102;UBERON:0006601!5.97e-09!102;UBERON:0001017!6.43e-09!73;UBERON:0005743!6.43e-09!73;UBERON:0000073!1.45e-08!75;UBERON:0001016!1.45e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.01e-10,95;UBERON:0000924,4.01e-10,95;UBERON:0006601,4.01e-10,95;UBERON:0001017,5.81e-09,73;UBERON:0001016,1.32e-08,75;UBERON:0002346,6.98e-08,64;UBERON:0003075,6.98e-08,64;UBERON:0007284,6.98e-08,64;UBERON:0010371,8.73e-08,73|phase1_expression=3.04282809499109,4.53668029931169,6.82498859084304,3.32710632437513,4.00716583957078,3.3575854382378,2.80335168714631,0.645616617207881,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0.198581902401771,0,1.27993938234725,1.14704640533585,8.03924749761028,3.01533397311352,3.66301095566011,2.47030445293286,2.52030129759931,2.66076612786366,0.635030673459631,0,0,1.1554064790051,0.498703936075477,1.02084678131185,0,0,0,0,0,0,2.14024590558481,1.92616169317078,2.56965453026354,3.9119567217402,1.09012578190223,2.85592037554813,2.52758868796568,0.55994568650145,0,0,0,0,1.28629718017973,0.85960031981627,2.06268836910977,7.28339259094552,4.7609188134483,6.97214543856797,4.40497891689872,1.77858959222228,2.2497492932035,2.96659908770092,2.1314403448383,2.39680088414724,4.61061966385865,8.50254820929517,6.07526722492608,7.15104868594699,3.71346279724945,3.75476519617743,5.26710436624302,4.31304619582064,4.5960939330501,1.10115880999389,2.17068474744819,1.53606533256243,6.3305418110493,4.7573574673253,9.89735404057844,1.3959149950069,1.12552522006336,1.98637722109853,3.53554302568401,3.70166370077668,7.08317894136142,1.36307147999731,1.43585964202892,1.44932244350839,0,0.679971333707751,0,0,0,0.421333260395256,1.02258193546835,1.81850203222008,2.12003744706204,2.67602497575693,3.84979432242953,0,7.11066703153331,1.5154372870785,1.26679932737549,0.505524445014783,0.45673551887624,0.258937883647172,1.7813056687779,1.90833859442749,1.21786191324856,0.922461989024234,0.60289056221049,1.88141931417128,1.25666591329675,4.20231445148436,0.722996784599558,0,1.29413479957927,0.662524555381181,0,0,0.878342391034642,2.30391377494801,3.83185582812887,0.359445373517761,0,0.254140454146129,1.64769703345305,0.457500602818626,6.78533501409468,2.25971616249959,3.58001640262463,1.45451631191692,2.10913641988085,2.64782346010822,1.24406970610093,0.505445516867349,1.05220927943237,2.99277018814219,3.44853156650209,3.78130472591233,2.56198190320716,5.10273743634959,3.97152532883034,5.90320864726292,1.29351685369508,3.66465587985832,4.72765200419548,5.98233822157426,3.06874025398605,4.17070873838397,1.0447564995665,1.02891068203972,2.38841120182192,0,0,0,1.86413195281952,3.04883877975425,2.70093092191522,2.3674473558521,0.590292695242212,0.925602677324269,0.697601834251224,0.804820204198858,0.583826711835847,1.15191894939436,0.985004784474571,0.972825714550269,0.438599962275997,0.439100230582101,0.402619256281115,1.47202963994889,6.99751364179134,3.63460661282178,1.32225283331772,3.83918850963421,3.71578674976702,2.70621668776396,2.62188582010345,2.44615848229357,1.90225626112559,4.74529061544512,3.12928013975621,5.02670417600539,2.98434708061726,2.72949721966768,3.59527763461689,2.80979464837102,2.38969527905241,3.60369011810855,2.74196430263349,1.1270773567308,2.8511185898344,3.10323979468201,3.15611189506434,2.27651533647326,1.32849133181642,1.72698600625512,0.863780147452604,0,0.500535317148282,1.17935397067922,0,0.811440485554012,0,0.50925170356284,0.575392274901621,0.648540907100142,0.549122826376163,4.31304619582064,0.744281895337007,1.5601883655728,1.51547326768267,0.896987067609561,0,1.10851914099963,3.41084541186873,3.09633455239849,2.71592137240301,3.52035372432753,3.1826188913945,2.61848004974615,3.70753930929818,2.67979744980525,2.87904096543407,3.98636921643718,2.29408640602033,2.59027472798843,2.02508682014116,1.50791283939272,4.89515115436839,3.44234991113325,2.48343071674259,1.12385412991454,2.22702204525186,2.45902418065013,0.252470927204373,4.10160685241134,5.0757036758563,4.09304455692318,2.86762557543062,3.11918143715352,4.81230102341015,4.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20779 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XU2 | |||
|association_with_transcript=-27bp_to_ENSMUST00000029175_5end | |||
|cluster_id=chr2:157249953..157249988,+ | |||
|description=CAGE_peak_2_at_Src_5end | |||
|id=chr2:157249953..157249988,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.69e-12!33;CL:0000047!5.69e-12!33;CL:0000031!5.69e-12!33;CL:0000404!5.69e-12!33;CL:0000393!1.84e-10!39;CL:0000211!1.84e-10!39;CL:0000221!2.94e-10!44;CL:0000133!2.94e-10!44;CL:0002319!3.99e-10!43;CL:0000055!1.91e-08!50;CL:0000117!8.43e-08!23;CL:0000337!8.43e-08!23;CL:0002321!4.18e-07!70;CL:0000220!4.18e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.27e-12,33;CL:0000047,3.27e-12,33;CL:0000031,3.27e-12,33;CL:0000404,3.27e-12,33;CL:0000221,1.63e-10,44;CL:0000133,1.63e-10,44;CL:0000393,1.78e-10,39;CL:0000211,1.78e-10,39;CL:0002319,2.22e-10,43;CL:0000117,6.04e-08,23;CL:0000337,6.04e-08,23;CL:0002321,2.40e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.97e-09!102;UBERON:0000924!5.97e-09!102;UBERON:0006601!5.97e-09!102;UBERON:0001017!6.43e-09!73;UBERON:0005743!6.43e-09!73;UBERON:0000073!1.45e-08!75;UBERON:0001016!1.45e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.01e-10,95;UBERON:0000924,4.01e-10,95;UBERON:0006601,4.01e-10,95;UBERON:0001017,5.81e-09,73;UBERON:0001016,1.32e-08,75;UBERON:0002346,6.98e-08,64;UBERON:0003075,6.98e-08,64;UBERON:0007284,6.98e-08,64;UBERON:0010371,8.73e-08,73 | |||
|phase1_expression=3.04282809499109,4.53668029931169,6.82498859084304,3.32710632437513,4.00716583957078,3.3575854382378,2.80335168714631,0.645616617207881,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0.198581902401771,0,1.27993938234725,1.14704640533585,8.03924749761028,3.01533397311352,3.66301095566011,2.47030445293286,2.52030129759931,2.66076612786366,0.635030673459631,0,0,1.1554064790051,0.498703936075477,1.02084678131185,0,0,0,0,0,0,2.14024590558481,1.92616169317078,2.56965453026354,3.9119567217402,1.09012578190223,2.85592037554813,2.52758868796568,0.55994568650145,0,0,0,0,1.28629718017973,0.85960031981627,2.06268836910977,7.28339259094552,4.7609188134483,6.97214543856797,4.40497891689872,1.77858959222228,2.2497492932035,2.96659908770092,2.1314403448383,2.39680088414724,4.61061966385865,8.50254820929517,6.07526722492608,7.15104868594699,3.71346279724945,3.75476519617743,5.26710436624302,4.31304619582064,4.5960939330501,1.10115880999389,2.17068474744819,1.53606533256243,6.3305418110493,4.7573574673253,9.89735404057844,1.3959149950069,1.12552522006336,1.98637722109853,3.53554302568401,3.70166370077668,7.08317894136142,1.36307147999731,1.43585964202892,1.44932244350839,0,0.679971333707751,0,0,0,0.421333260395256,1.02258193546835,1.81850203222008,2.12003744706204,2.67602497575693,3.84979432242953,0,7.11066703153331,1.5154372870785,1.26679932737549,0.505524445014783,0.45673551887624,0.258937883647172,1.7813056687779,1.90833859442749,1.21786191324856,0.922461989024234,0.60289056221049,1.88141931417128,1.25666591329675,4.20231445148436,0.722996784599558,0,1.29413479957927,0.662524555381181,0,0,0.878342391034642,2.30391377494801,3.83185582812887,0.359445373517761,0,0.254140454146129,1.64769703345305,0.457500602818626,6.78533501409468,2.25971616249959,3.58001640262463,1.45451631191692,2.10913641988085,2.64782346010822,1.24406970610093,0.505445516867349,1.05220927943237,2.99277018814219,3.44853156650209,3.78130472591233,2.56198190320716,5.10273743634959,3.97152532883034,5.90320864726292,1.29351685369508,3.66465587985832,4.72765200419548,5.98233822157426,3.06874025398605,4.17070873838397,1.0447564995665,1.02891068203972,2.38841120182192,0,0,0,1.86413195281952,3.04883877975425,2.70093092191522,2.3674473558521,0.590292695242212,0.925602677324269,0.697601834251224,0.804820204198858,0.583826711835847,1.15191894939436,0.985004784474571,0.972825714550269,0.438599962275997,0.439100230582101,0.402619256281115,1.47202963994889,6.99751364179134,3.63460661282178,1.32225283331772,3.83918850963421,3.71578674976702,2.70621668776396,2.62188582010345,2.44615848229357,1.90225626112559,4.74529061544512,3.12928013975621,5.02670417600539,2.98434708061726,2.72949721966768,3.59527763461689,2.80979464837102,2.38969527905241,3.60369011810855,2.74196430263349,1.1270773567308,2.8511185898344,3.10323979468201,3.15611189506434,2.27651533647326,1.32849133181642,1.72698600625512,0.863780147452604,0,0.500535317148282,1.17935397067922,0,0.811440485554012,0,0.50925170356284,0.575392274901621,0.648540907100142,0.549122826376163,4.31304619582064,0.744281895337007,1.5601883655728,1.51547326768267,0.896987067609561,0,1.10851914099963,3.41084541186873,3.09633455239849,2.71592137240301,3.52035372432753,3.1826188913945,2.61848004974615,3.70753930929818,2.67979744980525,2.87904096543407,3.98636921643718,2.29408640602033,2.59027472798843,2.02508682014116,1.50791283939272,4.89515115436839,3.44234991113325,2.48343071674259,1.12385412991454,2.22702204525186,2.45902418065013,0.252470927204373,4.10160685241134,5.0757036758563,4.09304455692318,2.86762557543062,3.11918143715352,4.81230102341015,4.45291771842384,4.67609372658099,4.34816555741176,1.92792789853084,1.84522110770749,4.09550888434687,3.90928702448583,2.3095817216155,1.32745138339963,1.45668381692989,3.02323556964751,1.88605079755898,1.18120757152309,1.53717573971964,2.06742634534577,2.18120237686503,2.49548164869305,1.26414703174326,2.10837217149998,0,2.04263763452273,1.98067203434441,2.97524972700335,3.64372959553707,3.90148514013002,2.67553226403106,2.96188237083818,3.34911444026059,3.98941903708308,4.2366414172764,3.08739757276947,0.8244312647074,1.61464426695906,2.17126529741361,1.90995750405018,1.31312719796049,2.62332752966866,1.66882771809459,0.170870880797853,1.65109494370578,0.925972636848558,0,0.136694227721025,0.228778173206523,1.01987057996313,0.279902904647316,1.10559979043539,0.954670618015114,2.84702394223022,2.23651413839534,3.45617090629764,2.09088296014469,2.18362563746178,1.34864346384821,2.64491058321075,2.09404753587224,1.16653475962614,1.24267862617385,0.56369293868419,2.39226473670366,1.82004339502807,3.11121901350476,2.71235629303235,1.35164900392623,1.64300134104056,1.69265700297135,0.943734099831398,0.483168241652012,0,0.316011120628178,2.22997736819181,1.64337531463724,0.77952493786677,0.716106782669926,0.79472541912506,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,1.58711268530648,3.10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| |||
|short_description=p2@Src | |||
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Revision as of 09:48, 4 August 2015
Short description: | p2@Src |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Src_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENSMUST00000029175_5end |
EntrezGene: | 20779 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.27e-12 | 33 |
neuronal stem cell | 3.27e-12 | 33 |
neuroblast | 3.27e-12 | 33 |
electrically signaling cell | 3.27e-12 | 33 |
ectodermal cell | 1.63e-10 | 44 |
neurectodermal cell | 1.63e-10 | 44 |
electrically responsive cell | 1.78e-10 | 39 |
electrically active cell | 1.78e-10 | 39 |
neural cell | 2.22e-10 | 43 |
CNS neuron (sensu Vertebrata) | 6.04e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-08 | 23 |
embryonic cell | 2.40e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.01e-10 | 95 |
ectoderm | 4.01e-10 | 95 |
presumptive ectoderm | 4.01e-10 | 95 |
central nervous system | 5.81e-09 | 73 |
nervous system | 1.32e-08 | 75 |
neurectoderm | 6.98e-08 | 64 |
neural plate | 6.98e-08 | 64 |
presumptive neural plate | 6.98e-08 | 64 |
ecto-epithelium | 8.73e-08 | 73 |