FFCP PHASE1:Hg19::chr7:129906660..129906667,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2297 | |||
|TSSclassifier=strong | |||
|UniProt=P48052 | |||
|association_with_transcript=0bp_to_ENST00000222481_5end | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_3_at_CPA2_5end | |||
|id=chr7:129906660..129906667,+ | |||
|ontology_enrichment_celltype=CL:0000946!1.25e-12!1;CL:0000786!1.25e-12!1;CL:0000980!1.25e-12!1;CL:0002563!3.45e-12!4;CL:0000785!6.07e-07!2;CL:0000955!6.07e-07!2;CL:0000818!6.07e-07!2;CL:0000954!6.07e-07!2;CL:0000816!6.07e-07!2;CL:0002253!7.20e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000946;8.64e-26;1!CL:0000786;8.64e-26;1!CL:0002231;1.60e-09;3!CL:0002563;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,7.62e-26,1;CL:0000786,7.62e-26,1;CL:0000980,7.62e-26,1;CL:0000785,1.21e-13,2;CL:0000955,1.21e-13,2;CL:0000818,1.21e-13,2;CL:0000954,1.21e-13,2;CL:0000816,1.21e-13,2;CL:0000817,1.54e-09,3;CL:0002231,1.81e-09,3;CL:0002563,1.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000954;1.29e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.45e-19!27;UBERON:0005409!4.59e-19!35;UBERON:0002108!2.21e-12!14;UBERON:0001242!3.45e-12!4;UBERON:0001262!3.45e-12!4;UBERON:0004786!3.45e-12!4;UBERON:0004808!3.45e-12!4;UBERON:0001277!3.45e-12!4;UBERON:0002336!4.81e-12!1;UBERON:0001018!4.81e-12!1;UBERON:0002473!4.81e-12!1;UBERON:0005340!4.81e-12!1;UBERON:0002316!4.81e-12!1;UBERON:0003544!4.81e-12!1;UBERON:0001020!4.81e-12!1;UBERON:0005970!4.81e-12!1;UBERON:0002437!4.81e-12!1;UBERON:0004921!1.25e-10!129;UBERON:0004185!1.25e-10!129;UBERON:0003350!6.22e-10!5;UBERON:0001007!1.45e-08!155;UBERON:0001555!1.45e-08!155;UBERON:0007026!1.45e-08!155;UBERON:0004119!1.03e-07!169;UBERON:0000925!1.03e-07!169;UBERON:0006595!1.03e-07!169;UBERON:0004177!3.79e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;5.87e-45;4!UBERON:0000160;2.27e-22;17!UBERON:0005409;1.25e-17;22!UBERON:0004921;1.80e-10;33!UBERON:0002114;1.19e-09;2!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.33e-45,4;UBERON:0000160,2.15e-22,17;UBERON:0005409,1.13e-15,25;UBERON:0002114,1.19e-09,2;UBERON:0001242,1.69e-07,4;UBERON:0001262,1.69e-07,4;UBERON:0004786,1.69e-07,4;UBERON:0004808,1.69e-07,4;UBERON:0001277,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0.530745387020035,0,0,0,0,0.067401132980677,0,0,0,0,0,0,36.2972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,278.218987998981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2380505851304,1.31135736302374,0,0,0,0,0,0.4226557275834,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,26.45134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CPA2 | |||
}} |
Revision as of 19:15, 22 January 2014
Short description: | p3@CPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CPA2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000222481_5end |
EntrezGene: | CPA2 |
HGNC: | 2297 |
UniProt: | P48052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 7.62e-26 | 1 |
plasma cell | 7.62e-26 | 1 |
plasmablast | 7.62e-26 | 1 |
mature B cell | 1.21e-13 | 2 |
pre-B-II cell | 1.21e-13 | 2 |
transitional stage B cell | 1.21e-13 | 2 |
small pre-B-II cell | 1.21e-13 | 2 |
immature B cell | 1.21e-13 | 2 |
precursor B cell | 1.54e-09 | 3 |
epithelial cell of prostate | 1.81e-09 | 3 |
intestinal epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 6.33e-45 | 4 |
intestine | 2.15e-22 | 17 |
gastrointestinal system | 1.13e-15 | 25 |
duodenum | 1.19e-09 | 2 |
intestinal mucosa | 1.69e-07 | 4 |
wall of intestine | 1.69e-07 | 4 |
gastrointestinal system mucosa | 1.69e-07 | 4 |
gastrointestinal system epithelium | 1.69e-07 | 4 |
intestinal epithelium | 1.69e-07 | 4 |