FFCP PHASE1:Hg19::chr7:15601573..15601580,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=392636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33784 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZNB7 | |||
|association_with_transcript=59bp_to_ENST00000342526,NM_001004320,uc003stb.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_AGMO_5end | |||
|id=chr7:15601573..15601580,- | |||
|ontology_enrichment_celltype=CL:0000188!2.93e-11!9;CL:0005020!1.44e-08!6;CL:0002138!1.44e-08!6;CL:0005022!1.44e-08!6;CL:0002602!3.77e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.15e-29;1!CL:0000182;1.99e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.16e-29,1;CL:0000182,1.77e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.75e-11;11!UBERON:0009497;1.06e-09;13!UBERON:0001041;3.51e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002418!1.66e-09!3;UBERON:0004755!1.66e-09!3;UBERON:0005057!5.95e-08!26;UBERON:0009854!1.63e-07!23;UBERON:0002107!2.84e-07!19;UBERON:0006925!2.84e-07!19;UBERON:0008836!2.84e-07!19;UBERON:0009568!3.77e-07!2;UBERON:0002216!3.77e-07!2;UBERON:0002209!3.77e-07!2;UBERON:0002213!3.77e-07!2;UBERON:0004267!3.77e-07!2;UBERON:0006444!3.77e-07!2;UBERON:0001995!3.77e-07!2;UBERON:0004715!3.77e-07!2;UBERON:0001468!3.77e-07!2;UBERON:0001130!3.77e-07!2;UBERON:0001066!3.77e-07!2;UBERON:0002368!7.47e-07!35;UBERON:0009497!9.06e-07!25;UBERON:0000015!9.06e-07!25;UBERON:0002423!9.06e-07!25;UBERON:0006235!9.06e-07!25;UBERON:0004161!9.06e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.12e-24;19!UBERON:0006925;3.12e-24;19!UBERON:0002423;1.43e-18;25!UBERON:0002365;6.13e-15;31!UBERON:0002330;6.13e-15;31!UBERON:0002368;1.45e-12;33!UBERON:0000949;1.72e-09;43!UBERON:0005172;7.27e-07;52!UBERON:0005173;7.27e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.94e-24,19;UBERON:0006925,2.94e-24,19;UBERON:0008836,2.94e-24,19;UBERON:0008835,4.86e-21,22;UBERON:0003894,4.86e-21,22;UBERON:0009854,3.75e-20,23;UBERON:0007499,1.37e-18,25;UBERON:0009497,1.37e-18,25;UBERON:0000015,1.37e-18,25;UBERON:0002423,1.37e-18,25;UBERON:0006235,1.37e-18,25;UBERON:0004161,1.37e-18,25;UBERON:0009856,6.73e-18,26;UBERON:0002365,4.18e-15,31;UBERON:0002330,4.18e-15,31;UBERON:0002368,1.92e-13,35;UBERON:0000949,1.44e-10,45;UBERON:0005911,6.01e-09,82;UBERON:0003929,6.97e-09,54;UBERON:0005172,6.97e-09,54;UBERON:0005173,6.97e-09,54;UBERON:0001041,1.90e-08,87;UBERON:0002530,3.63e-08,59;UBERON:0002417,4.89e-08,60;UBERON:0000916,4.89e-08,60;UBERON:0005177,2.61e-07,101 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,2.95394953340702,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.315132729228895,0.0824158583811665,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63794020620548,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.790068058663633,0.23248285073625,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p5@AGMO | |||
}} |
Revision as of 15:47, 22 January 2014
Short description: | p5@AGMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AGMO_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 59bp_to_ENST00000342526, NM_001004320, uc003stb.1_5end |
EntrezGene: | AGMO |
HGNC: | 33784 |
UniProt: | Q6ZNB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.16e-29 | 1 |
hepatocyte | 1.77e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.94e-24 | 19 |
digestive gland | 2.94e-24 | 19 |
liver bud | 2.94e-24 | 19 |
hepatic diverticulum | 4.86e-21 | 22 |
liver primordium | 4.86e-21 | 22 |
digestive tract diverticulum | 3.75e-20 | 23 |
epithelial sac | 1.37e-18 | 25 |
epithelium of foregut-midgut junction | 1.37e-18 | 25 |
anatomical boundary | 1.37e-18 | 25 |
hepatobiliary system | 1.37e-18 | 25 |
foregut-midgut junction | 1.37e-18 | 25 |
septum transversum | 1.37e-18 | 25 |
sac | 6.73e-18 | 26 |
exocrine gland | 4.18e-15 | 31 |
exocrine system | 4.18e-15 | 31 |
endocrine gland | 1.92e-13 | 35 |
endocrine system | 1.44e-10 | 45 |
endo-epithelium | 6.01e-09 | 82 |
gut epithelium | 6.97e-09 | 54 |
abdomen element | 6.97e-09 | 54 |
abdominal segment element | 6.97e-09 | 54 |
foregut | 1.90e-08 | 87 |
gland | 3.63e-08 | 59 |
abdominal segment of trunk | 4.89e-08 | 60 |
abdomen | 4.89e-08 | 60 |
trunk region element | 2.61e-07 | 101 |