Personal tools

FFCP PHASE1:Hg19::chr7:39664276..39664287,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C569|description=CAGE_peak_at_chr7:39664276..39664287,-|id=chr7:39664276..39664287,-|ontology_enrichment_celltype=CL:0002057!5.23e-48!42;CL:0000860!3.40e-44!45;CL:0000738!6.39e-38!140;CL:0000557!9.22e-35!71;CL:0002009!2.77e-34!65;CL:0000766!1.24e-31!76;CL:0002031!2.67e-31!124;CL:0002194!1.24e-30!63;CL:0000576!1.24e-30!63;CL:0000040!1.24e-30!63;CL:0000559!1.24e-30!63;CL:0000839!1.31e-30!70;CL:0000037!1.44e-29!172;CL:0000566!1.44e-29!172;CL:0002032!2.26e-28!165;CL:0000837!2.26e-28!165;CL:0002087!4.74e-28!119;CL:0000763!1.80e-27!112;CL:0000049!1.80e-27!112;CL:0000988!3.70e-27!182;CL:0000453!1.28e-13!5;CL:0000134!3.20e-13!358;CL:0002320!1.14e-12!365;CL:0000034!6.42e-12!444;CL:0000723!1.02e-11!436;CL:0000048!1.73e-11!430;CL:0000451!3.50e-11!10;CL:0000219!9.76e-11!390;CL:0000990!2.68e-10!8;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9;CL:0001014!7.73e-07!2;CL:0001016!7.73e-07!2|ontology_enrichment_celltype_v019=CL:0001014;1.14e-20;2!CL:0001016;1.14e-20;2!CL:0000860;2.98e-20;33!CL:0002057;2.98e-20;33!CL:0000576;2.26e-18;48!CL:0002393;2.13e-15;6!CL:0002397;2.13e-15;6!CL:0000473;8.26e-15;39!CL:0000234;8.26e-15;39!CL:0000766;1.38e-10;69!CL:0002087;8.01e-09;104!CL:0000453;8.02e-09;5!CL:0000451;1.76e-08;10!CL:0000840;1.73e-07;5!CL:0000236;4.06e-07;13!CL:0000738;7.31e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,7.46e-31,42;CL:0002057,7.46e-31,42;CL:0002009,4.29e-28,61;CL:0000473,8.98e-27,48;CL:0000234,8.98e-27,48;CL:0000557,2.01e-25,67;CL:0000738,5.56e-25,136;CL:0002194,4.71e-21,59;CL:0000576,4.71e-21,59;CL:0000040,4.71e-21,59;CL:0000559,4.71e-21,59;CL:0001014,9.37e-21,2;CL:0001016,9.37e-21,2;CL:0002031,3.00e-20,120;CL:0000766,5.45e-20,72;CL:0000037,1.01e-19,168;CL:0000839,1.16e-18,66;CL:0000988,1.40e-18,177;CL:0002087,1.76e-18,115;CL:0000763,2.25e-17,108;CL:0000049,2.25e-17,108;CL:0002032,2.14e-16,161;CL:0000837,2.14e-16,161;CL:0002393,1.97e-10,9;CL:0002397,1.97e-10,9;CL:0000453,7.43e-09,5;CL:0000451,1.72e-08,10;CL:0000134,8.02e-08,354;CL:0002320,1.31e-07,361;CL:0000840,1.62e-07,5;CL:0001029,1.62e-07,5;CL:0000219,7.32e-07,386|ontology_enrichment_development_v019=CL:0002057;2.32e-23;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.41e-30!80;UBERON:0001474!5.37e-27!86;UBERON:0002390!8.03e-23!102;UBERON:0003061!8.03e-23!102;UBERON:0002193!1.08e-22!112;UBERON:0004765!1.51e-21!101;UBERON:0001434!1.51e-21!101;UBERON:0002405!2.30e-20!115;UBERON:0002204!1.25e-12!167;UBERON:0002384!6.41e-12!375;UBERON:0003081!1.19e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.39e-22,76;UBERON:0001474,1.97e-20,82;UBERON:0002390,2.30e-19,98;UBERON:0003061,2.30e-19,98;UBERON:0004765,1.93e-18,90;UBERON:0002405,8.82e-18,93;UBERON:0002193,2.28e-17,108;UBERON:0001434,2.15e-16,100;UBERON:0002204,6.08e-09,167;UBERON:0003081,3.88e-08,203;UBERON:0002384,2.55e-07,371|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,1.08371286321253,0,0,0,0,0,0,4.43196326825502,4.01088894940283,3.68918480216948,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,2.01384674625505,1.2808035326455,1.89185783910868,0.689491361473237,1.29096936716765,2.70852973188684,0,0.545812300115692,0.224723484445085,0.306083892370903,1.28371610830437,0,0.329851300186716,0.598390972864896,0.852449501065388,0.870627715885752,0.56738522469114,0.622822248995575,1.00499466102697,2.08593167368081,2.17188844705117,0,0.368277635987565,0.632924774881769,0,0.850417199860174,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,3.41527781465669,1.17447437874188,1.14681968437569,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.780356085359269,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.664324201566815,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr7:39664276..39664287,-}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C569
|description=CAGE_peak_at_chr7:39664276..39664287,-
|id=chr7:39664276..39664287,-
|ontology_enrichment_celltype=CL:0002057!5.23e-48!42;CL:0000860!3.40e-44!45;CL:0000738!6.39e-38!140;CL:0000557!9.22e-35!71;CL:0002009!2.77e-34!65;CL:0000766!1.24e-31!76;CL:0002031!2.67e-31!124;CL:0002194!1.24e-30!63;CL:0000576!1.24e-30!63;CL:0000040!1.24e-30!63;CL:0000559!1.24e-30!63;CL:0000839!1.31e-30!70;CL:0000037!1.44e-29!172;CL:0000566!1.44e-29!172;CL:0002032!2.26e-28!165;CL:0000837!2.26e-28!165;CL:0002087!4.74e-28!119;CL:0000763!1.80e-27!112;CL:0000049!1.80e-27!112;CL:0000988!3.70e-27!182;CL:0000453!1.28e-13!5;CL:0000134!3.20e-13!358;CL:0002320!1.14e-12!365;CL:0000034!6.42e-12!444;CL:0000723!1.02e-11!436;CL:0000048!1.73e-11!430;CL:0000451!3.50e-11!10;CL:0000219!9.76e-11!390;CL:0000990!2.68e-10!8;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9;CL:0001014!7.73e-07!2;CL:0001016!7.73e-07!2
|ontology_enrichment_celltype_v019=CL:0001014;1.14e-20;2!CL:0001016;1.14e-20;2!CL:0000860;2.98e-20;33!CL:0002057;2.98e-20;33!CL:0000576;2.26e-18;48!CL:0002393;2.13e-15;6!CL:0002397;2.13e-15;6!CL:0000473;8.26e-15;39!CL:0000234;8.26e-15;39!CL:0000766;1.38e-10;69!CL:0002087;8.01e-09;104!CL:0000453;8.02e-09;5!CL:0000451;1.76e-08;10!CL:0000840;1.73e-07;5!CL:0000236;4.06e-07;13!CL:0000738;7.31e-07;136
|ontology_enrichment_celltype_v019_2=CL:0000860,7.46e-31,42;CL:0002057,7.46e-31,42;CL:0002009,4.29e-28,61;CL:0000473,8.98e-27,48;CL:0000234,8.98e-27,48;CL:0000557,2.01e-25,67;CL:0000738,5.56e-25,136;CL:0002194,4.71e-21,59;CL:0000576,4.71e-21,59;CL:0000040,4.71e-21,59;CL:0000559,4.71e-21,59;CL:0001014,9.37e-21,2;CL:0001016,9.37e-21,2;CL:0002031,3.00e-20,120;CL:0000766,5.45e-20,72;CL:0000037,1.01e-19,168;CL:0000839,1.16e-18,66;CL:0000988,1.40e-18,177;CL:0002087,1.76e-18,115;CL:0000763,2.25e-17,108;CL:0000049,2.25e-17,108;CL:0002032,2.14e-16,161;CL:0000837,2.14e-16,161;CL:0002393,1.97e-10,9;CL:0002397,1.97e-10,9;CL:0000453,7.43e-09,5;CL:0000451,1.72e-08,10;CL:0000134,8.02e-08,354;CL:0002320,1.31e-07,361;CL:0000840,1.62e-07,5;CL:0001029,1.62e-07,5;CL:0000219,7.32e-07,386
|ontology_enrichment_development_v019=CL:0002057;2.32e-23;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!9.41e-30!80;UBERON:0001474!5.37e-27!86;UBERON:0002390!8.03e-23!102;UBERON:0003061!8.03e-23!102;UBERON:0002193!1.08e-22!112;UBERON:0004765!1.51e-21!101;UBERON:0001434!1.51e-21!101;UBERON:0002405!2.30e-20!115;UBERON:0002204!1.25e-12!167;UBERON:0002384!6.41e-12!375;UBERON:0003081!1.19e-09!216
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.39e-22,76;UBERON:0001474,1.97e-20,82;UBERON:0002390,2.30e-19,98;UBERON:0003061,2.30e-19,98;UBERON:0004765,1.93e-18,90;UBERON:0002405,8.82e-18,93;UBERON:0002193,2.28e-17,108;UBERON:0001434,2.15e-16,100;UBERON:0002204,6.08e-09,167;UBERON:0003081,3.88e-08,203;UBERON:0002384,2.55e-07,371
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,1.08371286321253,0,0,0,0,0,0,4.43196326825502,4.01088894940283,3.68918480216948,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,2.01384674625505,1.2808035326455,1.89185783910868,0.689491361473237,1.29096936716765,2.70852973188684,0,0.545812300115692,0.224723484445085,0.306083892370903,1.28371610830437,0,0.329851300186716,0.598390972864896,0.852449501065388,0.870627715885752,0.56738522469114,0.622822248995575,1.00499466102697,2.08593167368081,2.17188844705117,0,0.368277635987565,0.632924774881769,0,0.850417199860174,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,3.41527781465669,1.17447437874188,1.14681968437569,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.780356085359269,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.664324201566815,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0
|short_description=p@chr7:39664276..39664287,-
}}

Revision as of 16:40, 22 January 2014

Short description:p@chr7:39664276..39664287, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr7:39664276..39664287, -
Coexpression cluster:C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data