FFCP PHASE1:Hg19::chr7:41726322..41726338,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=304bp_to_AK001903_5end | |||
|coexpression_cluster_id=C775 | |||
|description=CAGE_peak_1_at_AK001903_5end | |||
|id=chr7:41726322..41726338,- | |||
|ontology_enrichment_celltype=CL:0000055!1.07e-11!180;CL:0002371!1.72e-08!591;CL:0002334!2.04e-08!12;CL:0000548!2.00e-07!679;CL:0000004!2.00e-07!679;CL:0000255!2.00e-07!679;CL:0000144!2.02e-07!625;CL:0000723!2.18e-07!436;CL:0000359!2.41e-07!32;CL:0000012!3.53e-07!682;CL:0000192!4.59e-07!42;CL:0000514!4.59e-07!42;CL:0000034!5.63e-07!444;CL:0000057!5.97e-07!75;CL:0000048!6.92e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.41e-18;12!CL:0002615;4.90e-12;3!CL:0002579;5.08e-12;3!CL:0002580;1.02e-11;3!CL:0002593;1.33e-08;2!CL:0002583;6.43e-08;2!CL:0002595;3.43e-07;5!CL:0000136;4.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.30e-18,12;CL:0002615,7.00e-12,3;CL:0002580,9.40e-12,3;CL:0002579,1.09e-11,3;CL:0000048,1.23e-10,427;CL:0000723,2.44e-10,433;CL:0000034,5.92e-10,441;CL:0002593,1.34e-08,2;CL:0000057,2.37e-08,76;CL:0002583,5.40e-08,2;CL:0000134,1.01e-07,354;CL:0002320,2.13e-07,361;CL:0002595,2.75e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.50e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.87e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.02e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.87e-08!6;UBERON:0002358!5.87e-08!6;UBERON:0003684!5.87e-08!6;UBERON:0001178!5.87e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.59e-22;6!UBERON:0002358;2.59e-22;6!UBERON:0003684;2.59e-22;6!UBERON:0001178;2.59e-22;6!UBERON:0004457;1.19e-14;9!UBERON:0000042;1.19e-14;9!UBERON:0002456;1.33e-08;2!UBERON:0002118;2.33e-07;5!UBERON:0003834;3.43e-07;5!UBERON:0001533;3.43e-07;5!UBERON:0004573;3.46e-07;33!UBERON:0004571;3.46e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.88e-22,6;UBERON:0002358,7.88e-22,6;UBERON:0003684,7.88e-22,6;UBERON:0001178,7.88e-22,6;UBERON:0004457,1.40e-10,12;UBERON:0000042,1.40e-10,12;UBERON:0002456,1.34e-08,2;UBERON:0002384,2.73e-08,371;UBERON:0004573,1.44e-07,33;UBERON:0004571,1.44e-07,33;UBERON:0002118,2.26e-07,5;UBERON:0003834,2.75e-07,5;UBERON:0001533,2.75e-07,5;UBERON:0001637,7.04e-07,42;UBERON:0003509,7.04e-07,42;UBERON:0004572,7.04e-07,42 | |||
|phase1_expression=1.45342703416445,0.642301571672949,1.12763523276777,3.00219895059391,3.12872766099101,6.10636966870258,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0.662794751455832,4.03395087871065,2.41077811209591,2.19093027116212,0.487932798790507,0,0,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0.619412741790207,0,0.512321413058201,0.236482229888585,0.344745680736619,1.93645405075148,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.30361867064741,0,1.94653948121054,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.98788780678127,1.39293562831038,0.264818361626438,1.43418310374407,0,0,1.06748995729705,3.94668077467456,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,1.7308685049499,0,0,0.336672227908132,0,0.277064115484183,0.438977620880838,0.919463387397059,1.05166641234618,0.113432183160021,0.358779271377724,0.640672166455702,0,0,0,0,0.18611685633159,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0.302256294682921,0.339121184620975,0.386521706326594,0.818238361772504,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.904760751704678,0.370353780634118,0,0,0,0,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,1.17587489739202,0.141775097242386,0.179117045405697,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.36669142910475,1.29271715757778,0,0.845302752556,2.39344304926383,0,0,0,0,0.428933980974443,0,0,1.62868092146868,0,0.791951872933429,0,0,0.099972991182057,0,0,0,2.87549826589899,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,2.23297027036899,1.38115775959256,2.24528075546459,1.02511319404561,2.04682899626681,10.6163587954781,0,1.07946785661859,1.77561725313127,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0,0.255225424989168,0,0.464845549297286,2.83331112147576,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0.539617372749944,0,0.353437207037059,0.202182481573316,0,0,0,2.43713489631284,2.11300293513511,0.272999822815972,0.282810863907425,0,0,0,1.75380354101505,0,0,0.202910376962704,0.6196469961995,0.845086807596724,0.286822704408103,0.196498082026242,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0.20453736500431,0,6.53183134089796,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0,0.638002319463839,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0.51595809741485,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.999048047910651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,0,0.568209015825267,0,0,0.228840068396924,0,0.777186002913902,1.62640664988597,2.07085797312813,0.449803112163605,0.621051827505038,0.414706207840855,3.19010057469594,2.08698024724694,1.05180326298053,0,1.22061219961398,7.27394636810238,0.859284456339908,0,2.78667122089031,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,1.31570429747224,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0.920529751259204,0,0,0,0,0.314531883711793,0,0,0.212574920101683,0,0,0.954013051960256,0,0,0.705351887381368,0.918736432059601,0,0,0.159633859057151,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,3.05105676373734,0,0,0,4.0341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.887023701626388,0,0.514464028312255,0.0679697329768317,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,3.738396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| |||
|short_description=p1@AK001903 | |||
}} |
Revision as of 16:42, 22 January 2014
Short description: | p1@AK001903 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK001903_5end |
Coexpression cluster: | C775_hepatic_Preadipocyte_Mallassezderived_mesenchymal_Smooth_spindle_pagetoid |
Association with transcript: | 304bp_to_AK001903_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.30e-18 | 12 |
adipocyte of omentum tissue | 7.00e-12 | 3 |
preadipocyte of the breast | 9.40e-12 | 3 |
omentum preadipocyte | 1.09e-11 | 3 |
multi fate stem cell | 1.23e-10 | 427 |
somatic stem cell | 2.44e-10 | 433 |
stem cell | 5.92e-10 | 441 |
smooth muscle cell of the internal thoracic artery | 1.34e-08 | 2 |
fibroblast | 2.37e-08 | 76 |
subcutaneous preadipocyte | 5.40e-08 | 2 |
mesenchymal cell | 1.01e-07 | 354 |
connective tissue cell | 2.13e-07 | 361 |
smooth muscle cell of the subclavian artery | 2.75e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.88e-22 | 6 |
peritoneum | 7.88e-22 | 6 |
abdominal cavity | 7.88e-22 | 6 |
visceral peritoneum | 7.88e-22 | 6 |
cavity lining | 1.40e-10 | 12 |
serous membrane | 1.40e-10 | 12 |
internal thoracic artery | 1.34e-08 | 2 |
connective tissue | 2.73e-08 | 371 |
systemic artery | 1.44e-07 | 33 |
systemic arterial system | 1.44e-07 | 33 |
right ovary | 2.26e-07 | 5 |
thoracic segment blood vessel | 2.75e-07 | 5 |
subclavian artery | 2.75e-07 | 5 |
artery | 7.04e-07 | 42 |
arterial blood vessel | 7.04e-07 | 42 |
arterial system | 7.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.02e-12 | 14 |