FFCP PHASE1:Mm9::chr3:137806810..137806850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=108943|HGNC=|MCL_coexpression_id=0|UniProt=E0CY61|association_with_transcript=0bp_to_ENSMUST00000159481_5end|description=CAGE_peak_2_at_Rg9mtd2_5end|id=chr3:137806810..137806850,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.15e-08!63;UBERON:0000955!3.67e-07!50;UBERON:0006238!3.67e-07!50;UBERON:0003056!4.16e-07!49;UBERON:0001017!5.57e-07!73;UBERON:0005743!5.57e-07!73;UBERON:0002616!7.70e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.30e-08,64;UBERON:0003075,2.30e-08,64;UBERON:0007284,2.30e-08,64;UBERON:0004121,8.69e-08,95;UBERON:0000924,8.69e-08,95;UBERON:0006601,8.69e-08,95;UBERON:0001017,2.78e-07,73;UBERON:0010371,3.08e-07,73;UBERON:0003056,3.10e-07,49;UBERON:0000073,8.40e-07,54|phase1_expression=1.28119077683835,0,0,0.60492842261366,1.50268718983904,0.33575854382378,0.934450562382103,1.67860320474049,0.84473233291,1.40438715793196,0.34243593645101,1.11681022593471,1.19840510951844,1.83582845079895,0.999329285446988,1.21485160433896,2.09868563438444,3.62781490161973,1.91960207048034,1.27316895539409,13.5218831340201,1.39007331681239,1.30599894569468,1.11994695955385,0.91763712426868,0,0,0.215471232685889,0.950117097281869,0.756090389279792,0.443461021310609,2.54012269383853,0.61506478758457,0,2.02196133825892,0.831173226792462,1.02084678131185,2.09265815368454,1.5626706890476,0.523523743973798,0,0,0,1.25896817975577,1.11514624341466,1.28482726513177,0,1.09012578190223,0.659058548203415,1.1665793944457,1.25987779462826,2.87505128729943,2.18117387875057,1.45072428402269,0.336093799142464,0.514518872071894,1.14613375975503,0,1.21389876515759,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0,1.92109152660777,1.55534418462716,1.75507719831198,1.05162480675691,0.571301968807607,1.32521124570968,1.34739879136449,1.15014565221884,2.75765635983006,3.30347642998166,2.55374676170375,1.84327839907492,0.791317726381163,1.73826522844578,1.04182674111352,3.35019598801657,0.56276261003168,1.98637722109853,0.883885756421003,1.85083185038834,2.79599168737951,0.681535739998656,0.906858721281426,2.6087803983151,0.860423876981386,2.03991400112325,2.69851595818909,1.29955283489534,2.68816132258401,4.21333260395256,0.511290967734173,1.03914401841148,1.06001872353102,0.845060518660083,0,2.54805239706646,0,0.216491041011214,0,1.01104889002957,3.19714863213368,0.776813650941515,0.29688427812965,1.73485326766136,0.608930956624282,0.691846491768175,0.60289056221049,0.823120949949934,1.25666591329675,2.22475470960936,2.4581890676385,1.76922110389975,1.29413479957927,1.10420759230197,0.969750506270444,0,2.92780797011547,2.93225389538837,0.766371165625774,0.599075622529601,1.79970819298022,0.889491589511453,1.64769703345305,1.37250180845588,1.25654352112864,2.9550134432687,3.06858548796397,1.45451631191692,2.75810147215188,1.93494791315601,0.746441823660558,2.52722758433675,2.73574412652416,1.56144531555244,1.37941262660084,1.80062129805349,1.65775299619287,2.31324097114515,1.92170580427275,2.15513966487376,2.32833033665114,1.07783996466421,2.26927296201383,2.11141348996739,2.6303487891309,2.50242524303038,2.78601733217733,1.4404749548556,1.39323986772945,0.702213187313235,0.51469581422943,0.568326998791185,1.65700618028402,1.40715635988658,0.900310307305074,1.65721314909647,0.787056926989615,2.00547246753592,0.697601834251224,0.536546802799238,0.934122738937356,1.6455984991348,1.64167464079095,0.486412857275134,0.584799949701329,0.439100230582101,0.536825675041487,1.68231958851302,1.23485534855141,0.330418782983798,0.793351699990633,2.34617075588757,1.85789337488351,1.15980715189884,0,0.667134131534611,1.52180500890047,0,0.658795818896044,1.00534083520108,0.795825888164603,0.38992817423824,0,0.216138049874694,0.398282546508734,1.89667900953082,1.02823661348756,1.1270773567308,1.62921062276251,1.74557238450863,1.1221731182451,2.78240763346732,2.06654207171443,1.41298855057237,1.85095745882701,1.1858105083486,1.33476084572875,0.589676985339609,0.674586337154561,1.62288097110802,1.4470629585145,0.50925170356284,1.15078454980324,0.648540907100142,0,1.43768206527355,0.744281895337007,0.624075346229121,2.27320990152401,0.896987067609561,0.482443521363367,1.66277871149944,2.4633883530163,1.79261474086228,1.69745085775188,1.87752198630802,1.17254380209271,0.952174563544055,1.17080188714679,0.788175720530955,1.99318220683897,0.797273843287435,1.14704320301017,1.55416483679306,1.44649058581512,0,1.08781136763742,1.47529281905711,1.37968373152366,2.0871576698413,2.34423373184406,1.63934945376675,0.757412781613119,2.2085575359138,1.95219372148319,1.50796378412959,1.19484398976276,2.22798674082394,2.26461224631066,0.404810701674894,3.79932615284705,0.790575555893047,2.24924921495265,1.41940085208269,1.95872164033981,1.14020871547503,2.3095817216155,1.32745138339963,0.971122544619926,1.51161778482376,1.32023555829129,0.885905678642318,1.53717573971964,1.03371317267288,1.81766864738753,2.13898427030833,1.58018378967908,1.05418608574999,1.03135543248187,5.10659408630682,1.62054984628179,1.55230420539305,2.35770738534752,2.48276327099183,3.0322698992352,3.45552943264454,0.608929898229199,1.17335854031855,2.1183207086382,1.10264199027481,1.15420377059036,0.968786560175433,1.56813604813205,1.79058516004705,0.492422699235184,0.582961673259701,1.29797711407357,1.02522528478712,2.06386867963222,0.740778109478847,1.31857919903284,0.956859594047176,0.228778173206523,0.339956859987711,0.559805809294632,0.552799895217695,0,0.474503990371703,1.62655573701479,1.62008011232702,0.836353184057875,0.87345025498471,1.07891477107857,0.991841468704031,1.04702376793612,0.518459893167171,1.86401793926078,46.2228209721036,2.39226473670366,1.98550188548517,2.72231663681667,1.93739735216597,3.37912250981556,2.8165737274981,1.69265700297135,2.72634295506848,30.4395992240768,38.3079908322961,1.89606672376907,0.810900861160657,1.33524244314275,1.03936658382236,1.07416017400489,2.18549490259391,0.721172697119813,1.03382669022204,1.00966449948148,0.609654453239999,0.403304740547362,0.974578807397524,1.05833025804362,0.935015217452552,0.226730383615211,0.665957860122194,0.448569283047378,0.503653849092235,1.73870634628971,0.563047426353546,2.93042598827624,0.857473516316263,0.501572104035363,1.6942555278512,1.38097570952153,1.71868654031819,3.09335728218638,2.05524755931193,2.2661816921691,2.02506750069542,1.80128481289688,1.35942722695261,2.5888015587591,1.66059756134683,1.99512436700516,1.36586884603307,1.70174701947806,1.88651846365184,1.47074806760011,2.22246727801615,1.03017528619447,1.92551525755089,0.505394423527595,2.28131369901216,0.565879024158229,1.21733959710847,1.79270426733634,1.55075766180156,0.952587382566147,1.0429589335037,0.964546102318525,1.64834360321323,1.61918812147837,1.37147700954166,1.95223386775271,1.1921809497366,0.726732083161643,1.31753132581463,0.930760686808441,1.46342378298218,1.8414879800649,0.950628796921032,1.12228454331548,0.830445126869219,1.37906275325789,0,1.23949472948773,1.54325288784913,1.74867404556562,0.467863216890817,1.50409737833809,1.3390183244819,0.441182838239031,1.15933917810211|short_description=p2@Rg9mtd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108943 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CY61 | |||
|association_with_transcript=0bp_to_ENSMUST00000159481_5end | |||
|cluster_id=chr3:137806810..137806850,+ | |||
|description=CAGE_peak_2_at_Rg9mtd2_5end | |||
|id=chr3:137806810..137806850,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.15e-08!63;UBERON:0000955!3.67e-07!50;UBERON:0006238!3.67e-07!50;UBERON:0003056!4.16e-07!49;UBERON:0001017!5.57e-07!73;UBERON:0005743!5.57e-07!73;UBERON:0002616!7.70e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.30e-08,64;UBERON:0003075,2.30e-08,64;UBERON:0007284,2.30e-08,64;UBERON:0004121,8.69e-08,95;UBERON:0000924,8.69e-08,95;UBERON:0006601,8.69e-08,95;UBERON:0001017,2.78e-07,73;UBERON:0010371,3.08e-07,73;UBERON:0003056,3.10e-07,49;UBERON:0000073,8.40e-07,54 | |||
|phase1_expression=1.28119077683835,0,0,0.60492842261366,1.50268718983904,0.33575854382378,0.934450562382103,1.67860320474049,0.84473233291,1.40438715793196,0.34243593645101,1.11681022593471,1.19840510951844,1.83582845079895,0.999329285446988,1.21485160433896,2.09868563438444,3.62781490161973,1.91960207048034,1.27316895539409,13.5218831340201,1.39007331681239,1.30599894569468,1.11994695955385,0.91763712426868,0,0,0.215471232685889,0.950117097281869,0.756090389279792,0.443461021310609,2.54012269383853,0.61506478758457,0,2.02196133825892,0.831173226792462,1.02084678131185,2.09265815368454,1.5626706890476,0.523523743973798,0,0,0,1.25896817975577,1.11514624341466,1.28482726513177,0,1.09012578190223,0.659058548203415,1.1665793944457,1.25987779462826,2.87505128729943,2.18117387875057,1.45072428402269,0.336093799142464,0.514518872071894,1.14613375975503,0,1.21389876515759,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0,1.92109152660777,1.55534418462716,1.75507719831198,1.05162480675691,0.571301968807607,1.32521124570968,1.34739879136449,1.15014565221884,2.75765635983006,3.30347642998166,2.55374676170375,1.84327839907492,0.791317726381163,1.73826522844578,1.04182674111352,3.35019598801657,0.56276261003168,1.98637722109853,0.883885756421003,1.85083185038834,2.79599168737951,0.681535739998656,0.906858721281426,2.6087803983151,0.860423876981386,2.03991400112325,2.69851595818909,1.29955283489534,2.68816132258401,4.21333260395256,0.511290967734173,1.03914401841148,1.06001872353102,0.845060518660083,0,2.54805239706646,0,0.216491041011214,0,1.01104889002957,3.19714863213368,0.776813650941515,0.29688427812965,1.73485326766136,0.608930956624282,0.691846491768175,0.60289056221049,0.823120949949934,1.25666591329675,2.22475470960936,2.4581890676385,1.76922110389975,1.29413479957927,1.10420759230197,0.969750506270444,0,2.92780797011547,2.93225389538837,0.766371165625774,0.599075622529601,1.79970819298022,0.889491589511453,1.64769703345305,1.37250180845588,1.25654352112864,2.9550134432687,3.06858548796397,1.45451631191692,2.75810147215188,1.93494791315601,0.746441823660558,2.52722758433675,2.73574412652416,1.56144531555244,1.37941262660084,1.80062129805349,1.65775299619287,2.31324097114515,1.92170580427275,2.15513966487376,2.32833033665114,1.07783996466421,2.26927296201383,2.11141348996739,2.6303487891309,2.50242524303038,2.78601733217733,1.4404749548556,1.39323986772945,0.702213187313235,0.51469581422943,0.568326998791185,1.65700618028402,1.40715635988658,0.900310307305074,1.65721314909647,0.787056926989615,2.00547246753592,0.697601834251224,0.536546802799238,0.934122738937356,1.6455984991348,1.64167464079095,0.486412857275134,0.584799949701329,0.439100230582101,0.536825675041487,1.68231958851302,1.23485534855141,0.330418782983798,0.793351699990633,2.34617075588757,1.85789337488351,1.15980715189884,0,0.667134131534611,1.52180500890047,0,0.658795818896044,1.00534083520108,0.795825888164603,0.38992817423824,0,0.216138049874694,0.398282546508734,1.89667900953082,1.02823661348756,1.1270773567308,1.62921062276251,1.74557238450863,1.1221731182451,2.78240763346732,2.06654207171443,1.41298855057237,1.85095745882701,1.1858105083486,1.33476084572875,0.589676985339609,0.674586337154561,1.62288097110802,1.4470629585145,0.50925170356284,1.15078454980324,0.648540907100142,0,1.43768206527355,0.744281895337007,0.624075346229121,2.27320990152401,0.896987067609561,0.482443521363367,1.66277871149944,2.4633883530163,1.79261474086228,1.69745085775188,1.87752198630802,1.17254380209271,0.952174563544055,1.17080188714679,0.788175720530955,1.99318220683897,0.797273843287435,1.14704320301017,1.55416483679306,1.44649058581512,0,1.08781136763742,1.47529281905711,1.37968373152366,2.0871576698413,2.34423373184406,1.63934945376675,0.757412781613119,2.2085575359138,1.95219372148319,1.50796378412959,1.19484398976276,2.22798674082394,2.26461224631066,0.404810701674894,3.79932615284705,0.790575555893047,2.24924921495265,1.41940085208269,1.95872164033981,1.14020871547503,2.3095817216155,1.32745138339963,0.971122544619926,1.51161778482376,1.32023555829129,0.885905678642318,1.53717573971964,1.03371317267288,1.81766864738753,2.13898427030833,1.58018378967908,1.05418608574999,1.03135543248187,5.10659408630682,1.62054984628179,1.55230420539305,2.35770738534752,2.48276327099183,3.0322698992352,3.45552943264454,0.608929898229199,1.17335854031855,2.1183207086382,1.10264199027481,1.15420377059036,0.968786560175433,1.56813604813205,1.79058516004705,0.492422699235184,0.582961673259701,1.29797711407357,1.02522528478712,2.06386867963222,0.740778109478847,1.31857919903284,0.956859594047176,0.228778173206523,0.339956859987711,0.559805809294632,0.552799895217695,0,0.474503990371703,1.62655573701479,1.62008011232702,0.836353184057875,0.87345025498471,1.07891477107857,0.991841468704031,1.04702376793612,0.518459893167171,1.86401793926078,46.2228209721036,2.39226473670366,1.98550188548517,2.72231663681667,1.93739735216597,3.37912250981556,2.8165737274981,1.69265700297135,2.72634295506848,30.4395992240768,38.3079908322961,1.89606672376907,0.810900861160657,1.33524244314275,1.03936658382236,1.07416017400489,2.18549490259391,0.721172697119813,1.03382669022204,1.00966449948148,0.609654453239999,0.403304740547362,0.974578807397524,1.05833025804362,0.935015217452552,0.226730383615211,0.665957860122194,0.448569283047378,0.503653849092235,1.73870634628971,0.563047426353546,2.93042598827624,0.857473516316263,0.501572104035363,1.6942555278512,1.38097570952153,1.71868654031819,3.09335728218638,2.05524755931193,2.2661816921691,2.02506750069542,1.80128481289688,1.35942722695261,2.5888015587591,1.66059756134683,1.99512436700516,1.36586884603307,1.70174701947806,1.88651846365184,1.47074806760011,2.22246727801615,1.03017528619447,1.92551525755089,0.505394423527595,2.28131369901216,0.565879024158229,1.21733959710847,1.79270426733634,1.55075766180156,0.952587382566147,1.0429589335037,0.964546102318525,1.64834360321323,1.61918812147837,1.37147700954166,1.95223386775271,1.1921809497366,0.726732083161643,1.31753132581463,0.930760686808441,1.46342378298218,1.8414879800649,0.950628796921032,1.12228454331548,0.830445126869219,1.37906275325789,0,1.23949472948773,1.54325288784913,1.74867404556562,0.467863216890817,1.50409737833809,1.3390183244819,0.441182838239031,1.15933917810211 | |||
|short_description=p2@Rg9mtd2 | |||
}} |
Revision as of 02:50, 6 August 2015
Short description: | p2@Rg9mtd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rg9mtd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000159481_5end |
EntrezGene: | 108943 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.30e-08 | 64 |
neural plate | 2.30e-08 | 64 |
presumptive neural plate | 2.30e-08 | 64 |
ectoderm-derived structure | 8.69e-08 | 95 |
ectoderm | 8.69e-08 | 95 |
presumptive ectoderm | 8.69e-08 | 95 |
central nervous system | 2.78e-07 | 73 |
ecto-epithelium | 3.08e-07 | 73 |
pre-chordal neural plate | 3.10e-07 | 49 |
regional part of nervous system | 8.40e-07 | 54 |