FFCP PHASE1:Hg19::chr7:96125173..96125184,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr7:96125173..96125184,- | |||
|id=chr7:96125173..96125184,- | |||
|ontology_enrichment_celltype=CL:0000242!4.73e-37!2;CL:0002553!2.71e-19!1;CL:0000312!1.75e-15!5;CL:0000240!4.52e-13!6;CL:0000311!4.52e-13!6;CL:0000079!4.52e-13!6;CL:0000237!4.52e-13!6;CL:0000036!4.52e-13!6;CL:0000357!4.52e-13!6;CL:0000114!4.52e-13!6;CL:0002535!1.43e-10!2;CL:0000362!4.84e-10!8 | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.72e-66;2!CL:0000242;7.72e-66;2!CL:0000312;4.06e-27;5!CL:0000240;8.47e-23;6!CL:0000311;8.47e-23;6!CL:0000079;8.47e-23;6!CL:0000237;8.47e-23;6!CL:0002535;5.48e-18;2!CL:0000362;1.41e-15;9!CL:0002159;2.19e-10;14!CL:0000095;6.59e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.73e-66,2;CL:0000312,4.06e-27,5;CL:0000240,8.47e-23,6;CL:0000311,8.47e-23,6;CL:0000079,8.47e-23,6;CL:0000237,8.47e-23,6;CL:0000036,8.47e-23,6;CL:0000357,8.47e-23,6;CL:0000114,8.47e-23,6;CL:0002535,5.48e-18,2;CL:0000362,1.41e-15,9;CL:0002159,2.19e-10,14;CL:0000095,6.59e-08,17;CL:0000123,6.59e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000357;8.47e-23;6!CL:0000114;8.47e-23;6 | |||
|ontology_enrichment_disease=DOID:4362!1.75e-15!5;DOID:3119!2.74e-12!14;DOID:305!1.67e-10!106;DOID:0050687!1.21e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.94e-10;14!DOID:5409;1.27e-09;4!DOID:4362;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-11,106;DOID:3119,1.99e-10,14;DOID:5409,1.22e-09,4;DOID:0050687,1.02e-08,143;DOID:4362,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.16e-18!4;UBERON:0005058!1.16e-18!4;UBERON:0009113!1.16e-18!4;UBERON:0003295!1.16e-18!4;UBERON:0005562!1.16e-18!4;UBERON:0000002!4.52e-13!6;UBERON:0001560!4.52e-13!6;UBERON:0003351!8.78e-13!6;UBERON:0004177!4.27e-11!7;UBERON:0004807!1.33e-10!28;UBERON:0006955!1.43e-10!2;UBERON:0004801!1.43e-10!2;UBERON:0000974!4.83e-08!10;UBERON:0003408!4.83e-08!10;UBERON:0001042!4.83e-08!10;UBERON:0009145!4.83e-08!10;UBERON:0006562!2.16e-07!11;UBERON:0009722!2.16e-07!11;UBERON:0007690!2.16e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.48e-18;2!UBERON:0004801;5.48e-18;2!UBERON:0001003;9.24e-10;15!UBERON:0007376;9.24e-10;15!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.48e-18,2;UBERON:0004801,5.48e-18,2;UBERON:0001003,9.25e-10,15;UBERON:0007376,9.25e-10,15;UBERON:0007383,9.25e-10,15;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.32151167060821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87333962322753,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,5.43466236840025,0,0,5.17349025997675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:96125173..96125184,- | |||
}} |
Revision as of 18:04, 22 January 2014
Short description: | p@chr7:96125173..96125184, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:96125173..96125184, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.73e-66 | 2 |
keratinocyte | 4.06e-27 | 5 |
stratified squamous epithelial cell | 8.47e-23 | 6 |
keratin accumulating cell | 8.47e-23 | 6 |
stratified epithelial cell | 8.47e-23 | 6 |
keratinizing barrier epithelial cell | 8.47e-23 | 6 |
epithelial fate stem cell | 8.47e-23 | 6 |
stratified epithelial stem cell | 8.47e-23 | 6 |
surface ectodermal cell | 8.47e-23 | 6 |
epithelial cell of cervix | 5.48e-18 | 2 |
epidermal cell | 1.41e-15 | 9 |
general ecto-epithelial cell | 2.19e-10 | 14 |
neuron associated cell | 6.59e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.59e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.48e-18 | 2 |
cervix epithelium | 5.48e-18 | 2 |
skin epidermis | 9.25e-10 | 15 |
outer epithelium | 9.25e-10 | 15 |
enveloping layer of ectoderm | 9.25e-10 | 15 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-11 | 106 |
gastrointestinal system cancer | 1.99e-10 | 14 |
lung small cell carcinoma | 1.22e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |
cervical cancer | 5.35e-08 | 5 |