FFCP PHASE1:Mm9::chr5:137748749..137748804,-: Difference between revisions
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{{FFCP|EntrezGene=83701|HGNC=|MCL_coexpression_id=108|UniProt=Q99MR6|association_with_transcript=97bp_to_ENSMUST00000040873,NM_001109909,NM_001109910,NM_031405,uc009acb.2,uc009acc.2,uc012eew.1_5end|description=CAGE_peak_2_at_Srrt_5end|id=chr5:137748749..137748804,-|ontology_enrichment_celltype=CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39;CL:0000540!2.19e-12!33;CL:0000047!2.19e-12!33;CL:0000031!2.19e-12!33;CL:0000404!2.19e-12!33;CL:0002319!1.05e-10!43;CL:0000221!2.00e-10!44;CL:0000133!2.00e-10!44;CL:0000055!2.02e-10!50;CL:0000034!3.25e-08!97;CL:0000723!9.00e-08!91;CL:0000048!9.00e-08!91;CL:0000117!1.25e-07!23;CL:0000337!1.25e-07!23;CL:0000107!3.37e-07!9|ontology_enrichment_celltype_v019_2=CL:0000393,1.25e-12,39;CL:0000211,1.25e-12,39;CL:0000540,2.19e-12,33;CL:0000047,2.19e-12,33;CL:0000031,2.19e-12,33;CL:0000404,2.19e-12,33;CL:0002319,1.05e-10,43;CL:0000221,2.00e-10,44;CL:0000133,2.00e-10,44;CL:0000034,3.21e-08,97;CL:0000723,8.89e-08,91;CL:0000048,8.89e-08,91;CL:0000117,1.25e-07,23;CL:0000337,1.25e-07,23;CL:0000107,3.37e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!3.37e-07!9;UBERON:0001017!7.52e-07!73;UBERON:0005743!7.52e-07!73;UBERON:0000073!9.84e-07!75;UBERON:0001016!9.84e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.37e-07,9;UBERON:0001017,7.51e-07,73;UBERON:0001016,9.83e-07,75|phase1_expression=8.16759120234449,3.83872948403297,2.72999543633722,1.20985684522732,3.50627010962443,12.9267039372155,11.6806320297763,18.4646352521454,13.7972947708633,36.748130632553,2.56826952338257,17.4701028199787,6.50562773738582,25.5267575063472,14.6568295198892,10.3262386368811,8.39474253753776,7.5710919685977,5.89592064504677,8.06340338416257,16.7535281597607,9.33334941288322,9.40319240900167,9.5995453676044,10.3234176480227,2.29692785646008,4.30761996159075,11.8509177977239,3.23039813075836,5.29263272495855,14.8559442139054,24.7661962649256,36.2888224674896,0,5.77703239502549,4.48833542467929,5.10423390655923,6.69650609179052,4.6880120671428,5.23523743973798,4.70585190424811,6.14740936462601,6.311634589405,16.6183799727762,14.6996550268296,14.3166466686112,14.8654355426127,20.494364699762,10.3252505885202,8.94377535741704,16.9383570166689,8.62515386189829,9.73139115134871,14.5072428402269,29.5762543245368,16.4646039063006,14.8997388768154,11.8604581223812,34.191481885272,26.9785399428737,29.7900759647904,18.9752937958714,14.2287167377782,12.1486461832989,13.8441290759376,7.8152812644071,11.9840044207362,11.5265491596466,36.4987435325841,42.6618765128142,35.5449184683836,23.1377297367081,19.8781686856452,34.7873869770469,40.7343251827505,47.7993769037211,13.2139057199266,11.4918604276669,7.0659005297872,31.7845953429767,40.4375384722651,29.1711487511786,11.1673199600552,9.56696437053856,11.7654650788144,14.7314292736834,19.7896636310753,32.6199030194276,10.6016670666458,13.0738798984739,7.24661221754194,3.44169550792555,2.03991400112325,1.61910957491345,1.29955283489534,0.448026887097336,6.60088774619234,19.9403477416328,18.9643783360094,19.7870161725791,10.7040999030277,19.2489716121477,22.9324715735981,14.2213340630666,3.89683873820185,3.54703811665138,3.0331466700887,6.96521666286266,14.7594593678888,5.64080128446334,15.9606500624845,9.13396434936424,6.6878494204257,6.63179618431539,6.93773372100658,4.39833069653864,1.48316980640624,3.47038456607788,8.84610551949874,13.7501822455298,10.1587098491781,15.0311328471919,5.59175283654366,9.07620470735796,7.54008144528438,4.34276993854605,18.5713442984176,19.196887391789,17.9169020173021,6.29120685500255,16.9275223042892,24.7539073662343,9.38651329038293,15.5986428971502,9.55825004973976,15.8996437806402,16.5998163076016,8.58408097209642,3.53811861807145,3.15662783829711,24.4626432769883,14.9436367881757,15.6654052930654,16.1254155084215,14.6278473175355,14.476850392188,11.8064172945258,5.95017752699736,25.0058871802097,25.9075329829912,23.2255483896412,21.2619860454748,26.1364414272062,15.6713474934975,14.610531684964,15.5246728118425,21.066395619397,19.0437451264889,19.3231179589003,12.2204205795946,11.4917769390737,11.1638478105829,11.8372367792605,9.83821158737019,12.1871019181029,9.76642567951713,8.85302224618743,7.23945122676451,8.22799249567402,6.895033491322,6.32336714457675,4.9707995724613,6.36695334344047,6.57611451925822,10.5144974282064,25.9319623195797,0.991256348951394,11.3713743665324,28.5806255717213,26.9394539358109,18.9435168143477,13.5127961497639,11.3412802360884,8.75037880117772,5.69434873853414,4.28217282282428,7.28872105520782,6.16765063327568,7.60359939764569,5.39291645192533,4.10662294761919,2.78797782556114,23.5188197181821,18.3940105301663,13.5249282807697,18.124968178233,14.1585315632367,11.221731182451,10.813447848248,4.87113488332687,3.92496819603437,3.82531208157582,0.889357881261447,11.8460025058427,16.5109555895091,6.97072548393047,9.73728582664814,10.6117950291063,6.11102044275408,7.48009957372108,6.64754429777645,5.76578967694971,0,6.32639611036456,2.808339058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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:83701 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99MR6 | |||
|association_with_transcript=97bp_to_ENSMUST00000040873,NM_001109909,NM_001109910,NM_031405,uc009acb.2,uc009acc.2,uc012eew.1_5end | |||
|cluster_id=chr5:137748749..137748804,- | |||
|description=CAGE_peak_2_at_Srrt_5end | |||
|id=chr5:137748749..137748804,- | |||
|ontology_enrichment_celltype=CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39;CL:0000540!2.19e-12!33;CL:0000047!2.19e-12!33;CL:0000031!2.19e-12!33;CL:0000404!2.19e-12!33;CL:0002319!1.05e-10!43;CL:0000221!2.00e-10!44;CL:0000133!2.00e-10!44;CL:0000055!2.02e-10!50;CL:0000034!3.25e-08!97;CL:0000723!9.00e-08!91;CL:0000048!9.00e-08!91;CL:0000117!1.25e-07!23;CL:0000337!1.25e-07!23;CL:0000107!3.37e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.25e-12,39;CL:0000211,1.25e-12,39;CL:0000540,2.19e-12,33;CL:0000047,2.19e-12,33;CL:0000031,2.19e-12,33;CL:0000404,2.19e-12,33;CL:0002319,1.05e-10,43;CL:0000221,2.00e-10,44;CL:0000133,2.00e-10,44;CL:0000034,3.21e-08,97;CL:0000723,8.89e-08,91;CL:0000048,8.89e-08,91;CL:0000117,1.25e-07,23;CL:0000337,1.25e-07,23;CL:0000107,3.37e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.37e-07!9;UBERON:0001017!7.52e-07!73;UBERON:0005743!7.52e-07!73;UBERON:0000073!9.84e-07!75;UBERON:0001016!9.84e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.37e-07,9;UBERON:0001017,7.51e-07,73;UBERON:0001016,9.83e-07,75 | |||
|phase1_expression=8.16759120234449,3.83872948403297,2.72999543633722,1.20985684522732,3.50627010962443,12.9267039372155,11.6806320297763,18.4646352521454,13.7972947708633,36.748130632553,2.56826952338257,17.4701028199787,6.50562773738582,25.5267575063472,14.6568295198892,10.3262386368811,8.39474253753776,7.5710919685977,5.89592064504677,8.06340338416257,16.7535281597607,9.33334941288322,9.40319240900167,9.5995453676044,10.3234176480227,2.29692785646008,4.30761996159075,11.8509177977239,3.23039813075836,5.29263272495855,14.8559442139054,24.7661962649256,36.2888224674896,0,5.77703239502549,4.48833542467929,5.10423390655923,6.69650609179052,4.6880120671428,5.23523743973798,4.70585190424811,6.14740936462601,6.311634589405,16.6183799727762,14.6996550268296,14.3166466686112,14.8654355426127,20.494364699762,10.3252505885202,8.94377535741704,16.9383570166689,8.62515386189829,9.73139115134871,14.5072428402269,29.5762543245368,16.4646039063006,14.8997388768154,11.8604581223812,34.191481885272,26.9785399428737,29.7900759647904,18.9752937958714,14.2287167377782,12.1486461832989,13.8441290759376,7.8152812644071,11.9840044207362,11.5265491596466,36.4987435325841,42.6618765128142,35.5449184683836,23.1377297367081,19.8781686856452,34.7873869770469,40.7343251827505,47.7993769037211,13.2139057199266,11.4918604276669,7.0659005297872,31.7845953429767,40.4375384722651,29.1711487511786,11.1673199600552,9.56696437053856,11.7654650788144,14.7314292736834,19.7896636310753,32.6199030194276,10.6016670666458,13.0738798984739,7.24661221754194,3.44169550792555,2.03991400112325,1.61910957491345,1.29955283489534,0.448026887097336,6.60088774619234,19.9403477416328,18.9643783360094,19.7870161725791,10.7040999030277,19.2489716121477,22.9324715735981,14.2213340630666,3.89683873820185,3.54703811665138,3.0331466700887,6.96521666286266,14.7594593678888,5.64080128446334,15.9606500624845,9.13396434936424,6.6878494204257,6.63179618431539,6.93773372100658,4.39833069653864,1.48316980640624,3.47038456607788,8.84610551949874,13.7501822455298,10.1587098491781,15.0311328471919,5.59175283654366,9.07620470735796,7.54008144528438,4.34276993854605,18.5713442984176,19.196887391789,17.9169020173021,6.29120685500255,16.9275223042892,24.7539073662343,9.38651329038293,15.5986428971502,9.55825004973976,15.8996437806402,16.5998163076016,8.58408097209642,3.53811861807145,3.15662783829711,24.4626432769883,14.9436367881757,15.6654052930654,16.1254155084215,14.6278473175355,14.476850392188,11.8064172945258,5.95017752699736,25.0058871802097,25.9075329829912,23.2255483896412,21.2619860454748,26.1364414272062,15.6713474934975,14.610531684964,15.5246728118425,21.066395619397,19.0437451264889,19.3231179589003,12.2204205795946,11.4917769390737,11.1638478105829,11.8372367792605,9.83821158737019,12.1871019181029,9.76642567951713,8.85302224618743,7.23945122676451,8.22799249567402,6.895033491322,6.32336714457675,4.9707995724613,6.36695334344047,6.57611451925822,10.5144974282064,25.9319623195797,0.991256348951394,11.3713743665324,28.5806255717213,26.9394539358109,18.9435168143477,13.5127961497639,11.3412802360884,8.75037880117772,5.69434873853414,4.28217282282428,7.28872105520782,6.16765063327568,7.60359939764569,5.39291645192533,4.10662294761919,2.78797782556114,23.5188197181821,18.3940105301663,13.5249282807697,18.124968178233,14.1585315632367,11.221731182451,10.813447848248,4.87113488332687,3.92496819603437,3.82531208157582,0.889357881261447,11.8460025058427,16.5109555895091,6.97072548393047,9.73728582664814,10.6117950291063,6.11102044275408,7.48009957372108,6.64754429777645,5.76578967694971,0,6.32639611036456,2.80833905803104,3.28352541331245,2.87035861635059,1.92977408545347,5.72734889516475,19.7071068241304,26.2373612071662,25.6315079520534,19.7139808562342,15.0755631697634,5.95109102215034,10.9274842800367,16.5516901311501,11.5161638617363,13.0752910299139,7.70157579163969,6.04397436530635,6.219909519005,22.6186925908908,26.1074728232981,3.93411418415229,8.55403913544671,6.26147300952389,10.3146284201139,18.3607138821876,5.04941854408746,31.2353137222094,26.9402733564681,45.4543369216206,39.4298516621711,34.5337944827711,41.6122500259584,42.9099343775388,40.331308391761,41.9005044623315,13.8168166061377,7.38088443082997,12.2865266530406,13.845391545054,12.5377293459127,2.65490276679926,16.9946445308487,13.302236506449,9.8074641473067,10.6308681437078,7.99331384654211,8.5281336745513,5.45300594216258,9.26893183800275,2.21225730555071,0,3.09406629744561,4.76615448055303,18.9064148732876,21.8616175592855,14.3605813471167,17.2020026633005,16.0531935841863,10.6956863391379,9.13394847343798,8.21350978222986,3.81297727554876,5.07215315526412,6.76033637060068,8.7190790415789,10.3135101627147,10.3853939282729,8.69946768648825,6.41257840585672,7.41701208042039,11.619219894254,17.7492706448371,13.519200497989,15.822950388394,17.6335553760122,13.2691340459783,14.7881234094654,13.4353394230712,11.4705978257672,4.77335309007557,25.9395514736531,18.9087104427969,15.0127423742304,11.2907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| |||
|short_description=p2@Srrt | |||
}} |
Revision as of 21:19, 3 August 2015
Short description: | p2@Srrt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Srrt_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 97bp_to_ENSMUST00000040873, NM_001109909, NM_001109910, NM_031405, uc009acb.2, uc009acc.2, uc012eew.1_5end |
EntrezGene: | 83701 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.25e-12 | 39 |
electrically active cell | 1.25e-12 | 39 |
neuron | 2.19e-12 | 33 |
neuronal stem cell | 2.19e-12 | 33 |
neuroblast | 2.19e-12 | 33 |
electrically signaling cell | 2.19e-12 | 33 |
neural cell | 1.05e-10 | 43 |
ectodermal cell | 2.00e-10 | 44 |
neurectodermal cell | 2.00e-10 | 44 |
stem cell | 3.21e-08 | 97 |
somatic stem cell | 8.89e-08 | 91 |
multi fate stem cell | 8.89e-08 | 91 |
CNS neuron (sensu Vertebrata) | 1.25e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-07 | 23 |
autonomic neuron | 3.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.37e-07 | 9 |
central nervous system | 7.51e-07 | 73 |
nervous system | 9.83e-07 | 75 |