FFCP PHASE1:Mm9::chr5:88951559..88951580,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2431|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:88951559..88951580,-|id=chr5:88951559..88951580,-|ontology_enrichment_celltype=CL:0000553!2.48e-20!6;CL:0000556!2.48e-20!6;CL:0000050!2.29e-13!9;CL:0002027!7.48e-11!3;CL:0002006!7.48e-11!3;CL:0002024!7.48e-11!3;CL:0000414!7.94e-11!11;CL:0000839!4.57e-09!13;CL:0002031!8.89e-08!25;CL:0000763!3.00e-07!16|ontology_enrichment_celltype_v019_2=CL:0000553,4.94e-17,6;CL:0000556,4.94e-17,6;CL:0000050,1.88e-11,9;CL:0002027,3.51e-09,3;CL:0002006,3.51e-09,3;CL:0002024,3.51e-09,3;CL:0002031,8.30e-09,25;CL:0000839,5.35e-08,13;CL:0000988,8.41e-07,32;CL:0002032,8.41e-07,32;CL:0000037,8.41e-07,32;CL:0000837,8.41e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!3.19e-11!3;UBERON:0000331!4.22e-10!3;UBERON:0002116!4.22e-10!3;UBERON:0001204!4.22e-10!3;UBERON:0001168!4.22e-10!3;UBERON:0001155!2.03e-08!2;UBERON:0000059!2.03e-08!2;UBERON:0001962!3.29e-08!2;UBERON:0001961!3.29e-08!2;UBERON:0001744!3.29e-08!2;UBERON:0007023!2.12e-07!51;UBERON:0002371!3.00e-07!16;UBERON:0001474!9.95e-07!22;UBERON:0004765!9.95e-07!22;UBERON:0001434!9.95e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.30e-19,3;UBERON:0001155,3.36e-14,2;UBERON:0000059,3.36e-14,2;UBERON:0001962,8.16e-14,2;UBERON:0001961,8.16e-14,2;UBERON:0001744,8.16e-14,2;UBERON:0001153,8.50e-08,1;UBERON:0001045,8.50e-08,1;UBERON:0002193,1.13e-07,48;UBERON:0002405,1.13e-07,48;UBERON:0003199,1.33e-07,1;UBERON:0000029,3.16e-07,1;UBERON:0001097,3.16e-07,1;UBERON:0003968,3.16e-07,1;UBERON:0001467,3.16e-07,1;UBERON:0007023,3.41e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.61980213911861,0.699561878128147,2.36596624018678,5.34746291062381,0.84877930359606,0.0850432901510698,2.97872853602656,3.6567970479451,4.15980299262857,2.75291137280604,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,16.0937944781413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,1.58670339998127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66396435111626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:88951559..88951580,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2431 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:88951559..88951580,- | |||
|description=CAGE_peak_at_chr5:88951559..88951580,- | |||
|id=chr5:88951559..88951580,- | |||
|ontology_enrichment_celltype=CL:0000553!2.48e-20!6;CL:0000556!2.48e-20!6;CL:0000050!2.29e-13!9;CL:0002027!7.48e-11!3;CL:0002006!7.48e-11!3;CL:0002024!7.48e-11!3;CL:0000414!7.94e-11!11;CL:0000839!4.57e-09!13;CL:0002031!8.89e-08!25;CL:0000763!3.00e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.94e-17,6;CL:0000556,4.94e-17,6;CL:0000050,1.88e-11,9;CL:0002027,3.51e-09,3;CL:0002006,3.51e-09,3;CL:0002024,3.51e-09,3;CL:0002031,8.30e-09,25;CL:0000839,5.35e-08,13;CL:0000988,8.41e-07,32;CL:0002032,8.41e-07,32;CL:0000037,8.41e-07,32;CL:0000837,8.41e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!3.19e-11!3;UBERON:0000331!4.22e-10!3;UBERON:0002116!4.22e-10!3;UBERON:0001204!4.22e-10!3;UBERON:0001168!4.22e-10!3;UBERON:0001155!2.03e-08!2;UBERON:0000059!2.03e-08!2;UBERON:0001962!3.29e-08!2;UBERON:0001961!3.29e-08!2;UBERON:0001744!3.29e-08!2;UBERON:0007023!2.12e-07!51;UBERON:0002371!3.00e-07!16;UBERON:0001474!9.95e-07!22;UBERON:0004765!9.95e-07!22;UBERON:0001434!9.95e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.30e-19,3;UBERON:0001155,3.36e-14,2;UBERON:0000059,3.36e-14,2;UBERON:0001962,8.16e-14,2;UBERON:0001961,8.16e-14,2;UBERON:0001744,8.16e-14,2;UBERON:0001153,8.50e-08,1;UBERON:0001045,8.50e-08,1;UBERON:0002193,1.13e-07,48;UBERON:0002405,1.13e-07,48;UBERON:0003199,1.33e-07,1;UBERON:0000029,3.16e-07,1;UBERON:0001097,3.16e-07,1;UBERON:0003968,3.16e-07,1;UBERON:0001467,3.16e-07,1;UBERON:0007023,3.41e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.61980213911861,0.699561878128147,2.36596624018678,5.34746291062381,0.84877930359606,0.0850432901510698,2.97872853602656,3.6567970479451,4.15980299262857,2.75291137280604,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,16.0937944781413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,1.58670339998127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66396435111626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:88951559..88951580,- | |||
}} |
Latest revision as of 17:16, 4 August 2015
Short description: | p@chr5:88951559..88951580, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:88951559..88951580, - |
Coexpression cluster: | MCL_coexpression_mm9:2431 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.94e-17 | 6 |
megakaryocyte | 4.94e-17 | 6 |
megakaryocyte-erythroid progenitor cell | 1.88e-11 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 3.51e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.51e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.51e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 8.30e-09 | 25 |
myeloid lineage restricted progenitor cell | 5.35e-08 | 13 |
hematopoietic cell | 8.41e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.41e-07 | 32 |
hematopoietic stem cell | 8.41e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.41e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.30e-19 | 3 |
colon | 3.36e-14 | 2 |
large intestine | 3.36e-14 | 2 |
gut-associated lymphoid tissue | 8.16e-14 | 2 |
mucosa-associated lymphoid tissue | 8.16e-14 | 2 |
lymphoid tissue | 8.16e-14 | 2 |
caecum | 8.50e-08 | 1 |
midgut | 8.50e-08 | 1 |
hemolymphoid system | 1.13e-07 | 48 |
immune system | 1.13e-07 | 48 |
egg chamber | 1.33e-07 | 1 |
lymph node | 3.16e-07 | 1 |
axillary lymph node | 3.16e-07 | 1 |
peripheral lymph node | 3.16e-07 | 1 |
shoulder | 3.16e-07 | 1 |
adult organism | 3.41e-07 | 51 |