FFCP PHASE1:Hg19::chr9:19788870..19788880,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr9:19788870..19788880,+ | |||
|id=chr9:19788870..19788880,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.68e-81!34;UBERON:0002780!8.95e-80!41;UBERON:0001890!8.95e-80!41;UBERON:0006240!8.95e-80!41;UBERON:0001869!2.02e-78!32;UBERON:0003080!8.24e-78!42;UBERON:0001049!9.86e-78!57;UBERON:0005068!9.86e-78!57;UBERON:0006241!9.86e-78!57;UBERON:0007135!9.86e-78!57;UBERON:0002791!3.86e-76!33;UBERON:0002616!5.68e-75!59;UBERON:0002020!6.11e-74!34;UBERON:0003528!6.11e-74!34;UBERON:0000955!2.39e-67!69;UBERON:0006238!2.39e-67!69;UBERON:0002619!7.20e-58!22;UBERON:0005743!3.09e-57!86;UBERON:0003056!4.45e-57!61;UBERON:0001017!4.04e-56!82;UBERON:0001950!1.53e-55!20;UBERON:0002346!4.03e-55!90;UBERON:0003075!6.49e-54!86;UBERON:0007284!6.49e-54!86;UBERON:0000073!1.96e-51!94;UBERON:0001016!1.96e-51!94;UBERON:0000956!7.72e-51!25;UBERON:0000203!7.72e-51!25;UBERON:0007023!1.76e-42!115;UBERON:0000033!1.20e-41!123;UBERON:0000153!1.71e-39!129;UBERON:0007811!1.71e-39!129;UBERON:0000200!7.49e-37!6;UBERON:0000924!5.86e-28!173;UBERON:0006601!5.86e-28!173;UBERON:0001871!2.17e-27!7;UBERON:0004121!1.17e-26!169;UBERON:0000369!2.30e-25!4;UBERON:0002435!2.30e-25!4;UBERON:0000204!2.30e-25!4;UBERON:0010082!2.30e-25!4;UBERON:0002308!2.81e-24!9;UBERON:0000125!2.81e-24!9;UBERON:0002420!4.04e-24!9;UBERON:0007245!4.04e-24!9;UBERON:0010009!4.04e-24!9;UBERON:0010011!4.04e-24!9;UBERON:0000454!4.04e-24!9;UBERON:0009663!5.98e-22!7;UBERON:0000025!1.99e-19!194;UBERON:0002771!2.29e-19!3;UBERON:0005383!3.32e-19!3;UBERON:0005382!3.32e-19!3;UBERON:0004111!1.33e-14!241;UBERON:0001870!5.51e-14!2;UBERON:0000064!8.83e-14!219;UBERON:0001873!2.20e-13!2;UBERON:0010122!2.20e-13!2;UBERON:0000477!1.35e-12!286;UBERON:0001872!4.81e-12!5;UBERON:0000349!1.08e-11!5;UBERON:0000483!3.24e-11!309;UBERON:0000119!4.70e-11!312;UBERON:0000475!1.75e-10!365;UBERON:0000988!4.50e-09!3;UBERON:0004733!3.67e-08!12;UBERON:0002028!3.67e-08!12;UBERON:0007277!3.67e-08!12;UBERON:0001882!6.59e-08!1;UBERON:0005403!6.59e-08!1;UBERON:0002702!7.03e-08!1;UBERON:0002581!1.25e-07!1;UBERON:0000481!1.37e-07!347;UBERON:0002022!1.42e-07!1;UBERON:0001874!1.51e-07!1;UBERON:0004732!1.53e-07!13;UBERON:0002902!1.72e-07!1;UBERON:0009899!1.72e-07!1;UBERON:0002336!1.95e-07!1;UBERON:0001018!1.95e-07!1;UBERON:0002473!1.95e-07!1;UBERON:0005340!1.95e-07!1;UBERON:0002316!1.95e-07!1;UBERON:0003544!1.95e-07!1;UBERON:0001020!1.95e-07!1;UBERON:0005970!1.95e-07!1;UBERON:0002437!1.95e-07!1;UBERON:0003112!2.07e-07!1;UBERON:0000032!2.07e-07!1;UBERON:0005253!2.07e-07!1;UBERON:0003128!2.07e-07!1;UBERON:0002241!2.07e-07!1;UBERON:0001703!2.07e-07!1;UBERON:0004761!2.07e-07!1;UBERON:0009617!2.07e-07!1;UBERON:0002298!3.00e-07!8;UBERON:0007190!3.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;5.42e-195;1!UBERON:0005403;5.42e-195;1!UBERON:0000369;3.10e-50;4!UBERON:0002435;3.10e-50;4!UBERON:0000204;3.10e-50;4!UBERON:0000349;1.48e-40;5!UBERON:0009663;1.78e-29;7!UBERON:0002420;2.62e-23;9!UBERON:0000125;2.62e-23;9!UBERON:0007245;2.62e-23;9!UBERON:0002308;2.62e-23;9!UBERON:0010009;2.62e-23;9!UBERON:0010011;2.62e-23;9!UBERON:0000454;2.62e-23;9!UBERON:0003528;4.53e-08;34!UBERON:0002791;4.53e-08;32!UBERON:0002020;4.53e-08;34!UBERON:0001869;4.53e-08;32!UBERON:0001893;2.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,5.42e-195,1;UBERON:0005403,5.42e-195,1;UBERON:0000369,3.10e-50,4;UBERON:0002435,3.10e-50,4;UBERON:0000204,3.10e-50,4;UBERON:0010082,3.10e-50,4;UBERON:0000349,1.48e-40,5;UBERON:0009663,1.78e-29,7;UBERON:0002420,2.62e-23,9;UBERON:0000125,2.62e-23,9;UBERON:0007245,2.62e-23,9;UBERON:0002308,2.62e-23,9;UBERON:0010009,2.62e-23,9;UBERON:0010011,2.62e-23,9;UBERON:0000454,2.62e-23,9;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.751145584238999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,0,0,0.615349092722265,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.271878931907327,0.526182188502793,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:19788870..19788880,+ | |||
}} |
Revision as of 01:00, 23 January 2014
Short description: | p@chr9:19788870..19788880, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:19788870..19788880, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 5.42e-195 | 1 |
ventral striatum | 5.42e-195 | 1 |
corpus striatum | 3.10e-50 | 4 |
striatum | 3.10e-50 | 4 |
ventral part of telencephalon | 3.10e-50 | 4 |
future corpus striatum | 3.10e-50 | 4 |
limbic system | 1.48e-40 | 5 |
telencephalic nucleus | 1.78e-29 | 7 |
basal ganglion | 2.62e-23 | 9 |
neural nucleus | 2.62e-23 | 9 |
nuclear complex of neuraxis | 2.62e-23 | 9 |
nucleus of brain | 2.62e-23 | 9 |
aggregate regional part of brain | 2.62e-23 | 9 |
collection of basal ganglia | 2.62e-23 | 9 |
cerebral subcortex | 2.62e-23 | 9 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |