FFCP PHASE1:Mm9::chr6:115712364..115712398,-: Difference between revisions
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{{FFCP|EntrezGene=94346|HGNC=|MCL_coexpression_id=57|UniProt=Q4FJU9,E9Q6I9|association_with_transcript=85bp_to_ENSMUST00000166254,ENSMUST00000170625,NM_001168256,NM_001168257,uc012eqn.1,uc012eqo.1_5end|description=CAGE_peak_2_at_Tmem40_5end|id=chr6:115712364..115712398,-|ontology_enrichment_celltype=CL:0000333!1.97e-09!10;CL:0000095!1.97e-09!10;CL:0000243!1.97e-09!10;CL:0000123!1.97e-09!10;CL:0000125!1.97e-09!10;CL:0000030!1.97e-09!10;CL:0000339!1.97e-09!10;CL:0002453!9.29e-08!8;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44;CL:0002319!7.91e-07!43|ontology_enrichment_celltype_v019_2=CL:0000333,2.50e-19,10;CL:0000095,2.50e-19,10;CL:0000243,2.50e-19,10;CL:0000123,2.50e-19,10;CL:0000125,2.50e-19,10;CL:0000030,2.50e-19,10;CL:0000339,2.50e-19,10;CL:0002453,6.49e-14,8;CL:0000128,3.86e-13,6;CL:0000126,3.86e-13,6;CL:0000127,3.86e-13,6;CL:0002319,3.10e-08,43;CL:0000221,5.36e-08,44;CL:0000133,5.36e-08,44;CL:0002603,2.27e-07,2;CL:0000217,2.63e-07,2;CL:0000328,2.63e-07,2;CL:0002573,2.63e-07,2;CL:0002376,2.63e-07,2;CL:0000218,2.63e-07,2;CL:0000692,2.63e-07,2;CL:0002377,2.63e-07,2;CL:0002375,2.63e-07,2;CL:0002611,7.20e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.00e-14!102;UBERON:0000924!9.00e-14!102;UBERON:0006601!9.00e-14!102;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000970!5.29e-10!9;UBERON:0000019!5.29e-10!9;UBERON:0000047!5.29e-10!9;UBERON:0004088!5.29e-10!9;UBERON:0002104!5.29e-10!9;UBERON:0001456!5.29e-10!9;UBERON:0003072!5.29e-10!9;UBERON:0003071!5.29e-10!9;UBERON:0004128!5.29e-10!9;UBERON:0001017!6.91e-10!73;UBERON:0005743!6.91e-10!73;UBERON:0000033!6.94e-10!63;UBERON:0000020!4.43e-09!12;UBERON:0001032!4.43e-09!12;UBERON:0004456!4.43e-09!12;UBERON:0002346!4.49e-09!71;UBERON:0003075!4.49e-09!71;UBERON:0007284!4.49e-09!71;UBERON:0003056!1.35e-08!49;UBERON:0005085!4.68e-08!13;UBERON:0001444!1.60e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.48e-30,9;UBERON:0000019,1.48e-30,9;UBERON:0000047,1.48e-30,9;UBERON:0010312,1.48e-30,9;UBERON:0004088,1.48e-30,9;UBERON:0002104,1.48e-30,9;UBERON:0001456,1.48e-30,9;UBERON:0003072,1.48e-30,9;UBERON:0004128,1.48e-30,9;UBERON:0003071,1.48e-30,9;UBERON:0001444,1.03e-24,11;UBERON:0000020,1.60e-22,12;UBERON:0001032,1.60e-22,12;UBERON:0004456,1.60e-22,12;UBERON:0000033,1.15e-20,13;UBERON:0005085,1.15e-20,13;UBERON:0004121,1.02e-18,95;UBERON:0000924,1.02e-18,95;UBERON:0006601,1.02e-18,95;UBERON:0002346,7.76e-15,64;UBERON:0003075,7.76e-15,64;UBERON:0007284,7.76e-15,64;UBERON:0010371,1.57e-12,73;UBERON:0003056,2.21e-12,49;UBERON:0010314,3.85e-09,92;UBERON:0001016,1.27e-08,75;UBERON:0002256,7.20e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,1.56478268869608,1.96222640742402,1.5378032791413,0.58328969722285,1.39986421625363,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0,2.03306719241479,0,0,0,0.7104801149461,0.599200221036809,1.92109152660777,0.103689612308478,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0.427115042397309,0.186399445825301,1.36307147999731,4.60986516651392,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,3.57751155007006,5.20481771850815,15.8632452059096,15.3052810334547,15.9747106905858,15.7844678031081,13.9643955110486,12.1812241927647,17.3331258395141,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.938760993154008,0.167506257441816,0,0,0.315270288212382,0.8858587585951,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,1.43381278771531,0.445597348164788,1.41538265394416,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.258717367565509,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.656563598980245,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,0.171853182343688,0,0.755393897389701,1.35004500046361,0,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0,0,0,0,0,0.532427418478012,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0,0.526139422875686,0.271608227691724,0,0.474540072496697,0.197008964751127,0.818462086339379,0.619747364743864,0,1.24905288968973,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p2@Tmem40}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:94346 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q4FJU9,uniprot:E9Q6I9 | |||
|association_with_transcript=85bp_to_ENSMUST00000166254,ENSMUST00000170625,NM_001168256,NM_001168257,uc012eqn.1,uc012eqo.1_5end | |||
|cluster_id=chr6:115712364..115712398,- | |||
|description=CAGE_peak_2_at_Tmem40_5end | |||
|id=chr6:115712364..115712398,- | |||
|ontology_enrichment_celltype=CL:0000333!1.97e-09!10;CL:0000095!1.97e-09!10;CL:0000243!1.97e-09!10;CL:0000123!1.97e-09!10;CL:0000125!1.97e-09!10;CL:0000030!1.97e-09!10;CL:0000339!1.97e-09!10;CL:0002453!9.29e-08!8;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44;CL:0002319!7.91e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.50e-19,10;CL:0000095,2.50e-19,10;CL:0000243,2.50e-19,10;CL:0000123,2.50e-19,10;CL:0000125,2.50e-19,10;CL:0000030,2.50e-19,10;CL:0000339,2.50e-19,10;CL:0002453,6.49e-14,8;CL:0000128,3.86e-13,6;CL:0000126,3.86e-13,6;CL:0000127,3.86e-13,6;CL:0002319,3.10e-08,43;CL:0000221,5.36e-08,44;CL:0000133,5.36e-08,44;CL:0002603,2.27e-07,2;CL:0000217,2.63e-07,2;CL:0000328,2.63e-07,2;CL:0002573,2.63e-07,2;CL:0002376,2.63e-07,2;CL:0000218,2.63e-07,2;CL:0000692,2.63e-07,2;CL:0002377,2.63e-07,2;CL:0002375,2.63e-07,2;CL:0002611,7.20e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.00e-14!102;UBERON:0000924!9.00e-14!102;UBERON:0006601!9.00e-14!102;UBERON:0000073!4.54e-11!75;UBERON:0001016!4.54e-11!75;UBERON:0000970!5.29e-10!9;UBERON:0000019!5.29e-10!9;UBERON:0000047!5.29e-10!9;UBERON:0004088!5.29e-10!9;UBERON:0002104!5.29e-10!9;UBERON:0001456!5.29e-10!9;UBERON:0003072!5.29e-10!9;UBERON:0003071!5.29e-10!9;UBERON:0004128!5.29e-10!9;UBERON:0001017!6.91e-10!73;UBERON:0005743!6.91e-10!73;UBERON:0000033!6.94e-10!63;UBERON:0000020!4.43e-09!12;UBERON:0001032!4.43e-09!12;UBERON:0004456!4.43e-09!12;UBERON:0002346!4.49e-09!71;UBERON:0003075!4.49e-09!71;UBERON:0007284!4.49e-09!71;UBERON:0003056!1.35e-08!49;UBERON:0005085!4.68e-08!13;UBERON:0001444!1.60e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.48e-30,9;UBERON:0000019,1.48e-30,9;UBERON:0000047,1.48e-30,9;UBERON:0010312,1.48e-30,9;UBERON:0004088,1.48e-30,9;UBERON:0002104,1.48e-30,9;UBERON:0001456,1.48e-30,9;UBERON:0003072,1.48e-30,9;UBERON:0004128,1.48e-30,9;UBERON:0003071,1.48e-30,9;UBERON:0001444,1.03e-24,11;UBERON:0000020,1.60e-22,12;UBERON:0001032,1.60e-22,12;UBERON:0004456,1.60e-22,12;UBERON:0000033,1.15e-20,13;UBERON:0005085,1.15e-20,13;UBERON:0004121,1.02e-18,95;UBERON:0000924,1.02e-18,95;UBERON:0006601,1.02e-18,95;UBERON:0002346,7.76e-15,64;UBERON:0003075,7.76e-15,64;UBERON:0007284,7.76e-15,64;UBERON:0010371,1.57e-12,73;UBERON:0003056,2.21e-12,49;UBERON:0010314,3.85e-09,92;UBERON:0001016,1.27e-08,75;UBERON:0002256,7.20e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,1.56478268869608,1.96222640742402,1.5378032791413,0.58328969722285,1.39986421625363,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0,2.03306719241479,0,0,0,0.7104801149461,0.599200221036809,1.92109152660777,0.103689612308478,0,0,1.42825492201902,1.32521124570968,0,0,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0.427115042397309,0.186399445825301,1.36307147999731,4.60986516651392,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,3.57751155007006,5.20481771850815,15.8632452059096,15.3052810334547,15.9747106905858,15.7844678031081,13.9643955110486,12.1812241927647,17.3331258395141,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.938760993154008,0.167506257441816,0,0,0.315270288212382,0.8858587585951,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,1.43381278771531,0.445597348164788,1.41538265394416,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0.258717367565509,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.656563598980245,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,0.171853182343688,0,0.755393897389701,1.35004500046361,0,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0,0,0,0,0,0.532427418478012,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0,0.526139422875686,0.271608227691724,0,0.474540072496697,0.197008964751127,0.818462086339379,0.619747364743864,0,1.24905288968973,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Tmem40 | |||
}} |
Revision as of 22:55, 4 August 2015
Short description: | p2@Tmem40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem40_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 85bp_to_ENSMUST00000166254, ENSMUST00000170625, NM_001168256, NM_001168257, uc012eqn.1, uc012eqo.1_5end |
EntrezGene: | 94346 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.50e-19 | 10 |
neuron associated cell | 2.50e-19 | 10 |
glial cell (sensu Vertebrata) | 2.50e-19 | 10 |
neuron associated cell (sensu Vertebrata) | 2.50e-19 | 10 |
glial cell | 2.50e-19 | 10 |
glioblast | 2.50e-19 | 10 |
glioblast (sensu Vertebrata) | 2.50e-19 | 10 |
oligodendrocyte precursor cell | 6.49e-14 | 8 |
oligodendrocyte | 3.86e-13 | 6 |
macroglial cell | 3.86e-13 | 6 |
astrocyte | 3.86e-13 | 6 |
neural cell | 3.10e-08 | 43 |
ectodermal cell | 5.36e-08 | 44 |
neurectodermal cell | 5.36e-08 | 44 |
astrocyte of the cerebellum | 2.27e-07 | 2 |
insulating cell | 2.63e-07 | 2 |
myelin accumulating cell | 2.63e-07 | 2 |
Schwann cell | 2.63e-07 | 2 |
non-myelinating Schwann cell | 2.63e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 2.63e-07 | 2 |
terminal Schwann cell | 2.63e-07 | 2 |
immature Schwann cell | 2.63e-07 | 2 |
Schwann cell precursor | 2.63e-07 | 2 |
neuron of the dorsal spinal cord | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
eye | 1.48e-30 | 9 |
camera-type eye | 1.48e-30 | 9 |
simple eye | 1.48e-30 | 9 |
immature eye | 1.48e-30 | 9 |
ocular region | 1.48e-30 | 9 |
visual system | 1.48e-30 | 9 |
face | 1.48e-30 | 9 |
optic cup | 1.48e-30 | 9 |
optic vesicle | 1.48e-30 | 9 |
eye primordium | 1.48e-30 | 9 |
subdivision of head | 1.03e-24 | 11 |
sense organ | 1.60e-22 | 12 |
sensory system | 1.60e-22 | 12 |
entire sense organ system | 1.60e-22 | 12 |
head | 1.15e-20 | 13 |
ectodermal placode | 1.15e-20 | 13 |
ectoderm-derived structure | 1.02e-18 | 95 |
ectoderm | 1.02e-18 | 95 |
presumptive ectoderm | 1.02e-18 | 95 |
neurectoderm | 7.76e-15 | 64 |
neural plate | 7.76e-15 | 64 |
presumptive neural plate | 7.76e-15 | 64 |
ecto-epithelium | 1.57e-12 | 73 |
pre-chordal neural plate | 2.21e-12 | 49 |
structure with developmental contribution from neural crest | 3.85e-09 | 92 |
nervous system | 1.27e-08 | 75 |
dorsal horn of spinal cord | 7.20e-07 | 2 |