FFCP PHASE1:Mm9::chr8:77397190..77397202,+: Difference between revisions
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{{FFCP|EntrezGene=71597|HGNC=|MCL_coexpression_id=12|UniProt=A1A546,B1Q2M1|association_with_transcript=117bp_to_NM_027837,uc009mgv.1,uc012ggb.1_5end|description=CAGE_peak_5_at_Isx_5end|id=chr8:77397190..77397202,+|ontology_enrichment_celltype=CL:0002563!9.14e-12!9;CL:0002251!9.14e-12!9;CL:0000239!8.73e-09!6;CL:0000677!8.73e-09!6;CL:0000212!8.73e-09!6;CL:0000584!8.73e-09!6;CL:0000075!2.37e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.49e-19,9;CL:0002251,1.49e-19,9;CL:0000239,2.68e-14,6;CL:0000677,2.68e-14,6;CL:0000584,2.68e-14,6;CL:0000075,3.77e-12,7;CL:0000066,3.12e-11,25;CL:0002076,4.66e-11,15;CL:0000682,3.06e-08,3;CL:0000223,6.99e-08,20;CL:0002250,7.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.78e-26!43;UBERON:0005409!1.03e-25!59;UBERON:0000344!3.20e-19!15;UBERON:0001242!7.28e-17!13;UBERON:0000060!7.28e-17!13;UBERON:0001262!7.28e-17!13;UBERON:0004786!7.28e-17!13;UBERON:0003350!9.14e-12!9;UBERON:0004808!9.14e-12!9;UBERON:0001277!9.14e-12!9;UBERON:0004923!3.27e-10!24;UBERON:0000485!3.46e-09!11;UBERON:0001007!1.71e-07!128;UBERON:0001555!1.71e-07!128;UBERON:0007026!1.71e-07!128;UBERON:0004119!3.29e-07!130;UBERON:0000925!3.29e-07!130;UBERON:0006595!3.29e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.68e-59,31;UBERON:0005409,5.89e-40,47;UBERON:0000344,9.46e-33,15;UBERON:0001242,1.42e-28,13;UBERON:0001262,1.42e-28,13;UBERON:0004786,1.42e-28,13;UBERON:0003350,1.49e-19,9;UBERON:0004808,1.49e-19,9;UBERON:0001277,1.49e-19,9;UBERON:0004923,3.98e-19,24;UBERON:0000485,1.09e-15,11;UBERON:0001007,1.76e-14,116;UBERON:0001555,1.76e-14,116;UBERON:0007026,1.76e-14,116;UBERON:0004119,4.09e-14,118;UBERON:0000925,4.09e-14,118;UBERON:0006595,4.09e-14,118;UBERON:0004921,1.79e-12,114;UBERON:0002108,3.79e-10,4;UBERON:0000331,5.30e-08,3;UBERON:0002116,5.30e-08,3;UBERON:0001204,5.30e-08,3;UBERON:0001168,5.30e-08,3|phase1_expression=0,17.0997949743287,13.1949779422965,14.8207463540347,14.0250804384977,4.02910252588535,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95957567643077,8.94696196161963,20.0981187440257,9.90752591165872,9.9116767035509,23.5629040125904,8.31699428207772,8.86922042621219,0,0,0,3.46621943701529,4.48833542467929,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,20.9474785271045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,42.9544417878937,15.6025834331491,0.213288250535234,0.464473343720877,1.9330119198314,4.84040459096022,5.78182913996663,6.27744566171445,12.3377556001573,9.38784041926862,5.52937459360593,7.75930240960488,5.26403035221624,8.98819408654222,13.400559092231,19.1175622324193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.87345025498471,0,0.0826534557253359,0,15.035336901848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.448176066834085,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,1.16965804222704,0.214871054048298,0,0,0|short_description=p5@Isx}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71597 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A1A546,uniprot:B1Q2M1 | |||
|association_with_transcript=117bp_to_NM_027837,uc009mgv.1,uc012ggb.1_5end | |||
|cluster_id=chr8:77397190..77397202,+ | |||
|description=CAGE_peak_5_at_Isx_5end | |||
|id=chr8:77397190..77397202,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.14e-12!9;CL:0002251!9.14e-12!9;CL:0000239!8.73e-09!6;CL:0000677!8.73e-09!6;CL:0000212!8.73e-09!6;CL:0000584!8.73e-09!6;CL:0000075!2.37e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.49e-19,9;CL:0002251,1.49e-19,9;CL:0000239,2.68e-14,6;CL:0000677,2.68e-14,6;CL:0000584,2.68e-14,6;CL:0000075,3.77e-12,7;CL:0000066,3.12e-11,25;CL:0002076,4.66e-11,15;CL:0000682,3.06e-08,3;CL:0000223,6.99e-08,20;CL:0002250,7.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.78e-26!43;UBERON:0005409!1.03e-25!59;UBERON:0000344!3.20e-19!15;UBERON:0001242!7.28e-17!13;UBERON:0000060!7.28e-17!13;UBERON:0001262!7.28e-17!13;UBERON:0004786!7.28e-17!13;UBERON:0003350!9.14e-12!9;UBERON:0004808!9.14e-12!9;UBERON:0001277!9.14e-12!9;UBERON:0004923!3.27e-10!24;UBERON:0000485!3.46e-09!11;UBERON:0001007!1.71e-07!128;UBERON:0001555!1.71e-07!128;UBERON:0007026!1.71e-07!128;UBERON:0004119!3.29e-07!130;UBERON:0000925!3.29e-07!130;UBERON:0006595!3.29e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.68e-59,31;UBERON:0005409,5.89e-40,47;UBERON:0000344,9.46e-33,15;UBERON:0001242,1.42e-28,13;UBERON:0001262,1.42e-28,13;UBERON:0004786,1.42e-28,13;UBERON:0003350,1.49e-19,9;UBERON:0004808,1.49e-19,9;UBERON:0001277,1.49e-19,9;UBERON:0004923,3.98e-19,24;UBERON:0000485,1.09e-15,11;UBERON:0001007,1.76e-14,116;UBERON:0001555,1.76e-14,116;UBERON:0007026,1.76e-14,116;UBERON:0004119,4.09e-14,118;UBERON:0000925,4.09e-14,118;UBERON:0006595,4.09e-14,118;UBERON:0004921,1.79e-12,114;UBERON:0002108,3.79e-10,4;UBERON:0000331,5.30e-08,3;UBERON:0002116,5.30e-08,3;UBERON:0001204,5.30e-08,3;UBERON:0001168,5.30e-08,3 | |||
|phase1_expression=0,17.0997949743287,13.1949779422965,14.8207463540347,14.0250804384977,4.02910252588535,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95957567643077,8.94696196161963,20.0981187440257,9.90752591165872,9.9116767035509,23.5629040125904,8.31699428207772,8.86922042621219,0,0,0,3.46621943701529,4.48833542467929,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,20.9474785271045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,42.9544417878937,15.6025834331491,0.213288250535234,0.464473343720877,1.9330119198314,4.84040459096022,5.78182913996663,6.27744566171445,12.3377556001573,9.38784041926862,5.52937459360593,7.75930240960488,5.26403035221624,8.98819408654222,13.400559092231,19.1175622324193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2421951384537,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.87345025498471,0,0.0826534557253359,0,15.035336901848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.448176066834085,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,1.16965804222704,0.214871054048298,0,0,0 | |||
|short_description=p5@Isx | |||
}} |
Revision as of 03:02, 4 August 2015
Short description: | p5@Isx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Isx_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 117bp_to_NM_027837, uc009mgv.1, uc012ggb.1_5end |
EntrezGene: | 71597 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.49e-19 | 9 |
epithelial cell of alimentary canal | 1.49e-19 | 9 |
brush border epithelial cell | 2.68e-14 | 6 |
gut absorptive cell | 2.68e-14 | 6 |
enterocyte | 2.68e-14 | 6 |
columnar/cuboidal epithelial cell | 3.77e-12 | 7 |
epithelial cell | 3.12e-11 | 25 |
endo-epithelial cell | 4.66e-11 | 15 |
M cell of gut | 3.06e-08 | 3 |
endodermal cell | 6.99e-08 | 20 |
intestinal crypt stem cell | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.68e-59 | 31 |
gastrointestinal system | 5.89e-40 | 47 |
mucosa | 9.46e-33 | 15 |
intestinal mucosa | 1.42e-28 | 13 |
wall of intestine | 1.42e-28 | 13 |
gastrointestinal system mucosa | 1.42e-28 | 13 |
epithelium of mucosa | 1.49e-19 | 9 |
gastrointestinal system epithelium | 1.49e-19 | 9 |
intestinal epithelium | 1.49e-19 | 9 |
organ component layer | 3.98e-19 | 24 |
simple columnar epithelium | 1.09e-15 | 11 |
digestive system | 1.76e-14 | 116 |
digestive tract | 1.76e-14 | 116 |
primitive gut | 1.76e-14 | 116 |
endoderm-derived structure | 4.09e-14 | 118 |
endoderm | 4.09e-14 | 118 |
presumptive endoderm | 4.09e-14 | 118 |
subdivision of digestive tract | 1.79e-12 | 114 |
small intestine | 3.79e-10 | 4 |
ileal mucosa | 5.30e-08 | 3 |
ileum | 5.30e-08 | 3 |
mucosa of small intestine | 5.30e-08 | 3 |
wall of small intestine | 5.30e-08 | 3 |