FFCP PHASE1:Mm9::chr9:96919242..96919254,-: Difference between revisions
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{{FFCP|EntrezGene=211949|HGNC=|UniProt=Q8R5B6|association_with_transcript=7bp_to_ENSMUST00000055433_5end|description=CAGE_peak_2_at_Spsb4_5end|id=chr9:96919242..96919254,-|ontology_enrichment_celltype=CL:0000540!4.91e-10!33;CL:0000047!4.91e-10!33;CL:0000031!4.91e-10!33;CL:0000404!4.91e-10!33;CL:0002319!1.24e-09!43;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0000117!2.11e-08!23;CL:0000337!2.11e-08!23;CL:0000055!6.88e-08!50;CL:0000393!1.53e-07!39;CL:0000211!1.53e-07!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!6.98e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0003103,6.80e-14,43;UBERON:0007100,1.48e-08,18;UBERON:0000948,1.48e-08,18;UBERON:0005498,1.48e-08,18;UBERON:0004140,1.48e-08,18;UBERON:0009881,1.48e-08,18;UBERON:0004141,1.48e-08,18;UBERON:0003084,1.48e-08,18;UBERON:0007005,1.48e-08,18;UBERON:0004139,1.48e-08,18;UBERON:0004291,1.48e-08,18;UBERON:0000489,2.33e-08,21;UBERON:0002113,1.32e-07,14;UBERON:0003918,1.32e-07,14;UBERON:0011143,1.32e-07,14;UBERON:0005095,1.32e-07,14;UBERON:0007687,1.32e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,1.09012578190223,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0.449949858640699,0,2.8419204597844,0.299600110518405,1.92109152660777,1.14058573539325,0.540023753326763,0.420649922702764,1.14260393761521,0.883474163806454,0.979926393719632,1.72521847832825,0.919218786610021,0,0.255374676170375,0.153606533256243,1.71452174049252,0.548925861614458,0.52091337055676,1.3959149950069,1.12552522006336,0.916789486660861,1.17851434189467,0.996601765593721,1.3047961207771,0.227178579999552,0.377857800533928,0.869593466105033,0.860423876981386,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0,1.23597483867187,0,0,0.485300549842228,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0,0.299581278809645,0,0.753926112677186,0,0.511430914660661,0.62336413367868,0,0.305518091550949,0.124406970610093,0,0,2.34216797332867,2.98872735763515,0.900310649026746,0.753524089178575,1.08858398642125,1.2811372028485,2.15513966487376,0.517406741478031,0,0.756424320671277,0.879755620819744,0.876782929710299,0.278047249225598,0.696504333044333,0.411564272815887,0.995171334092466,0,0.257347907114715,0.284163499395593,2.07125772535502,2.34526059981096,1.80062061461015,2.84093682702252,1.18058539048442,1.23413690309903,2.32533944750408,1.87791380979733,1.16765342367169,1.48103864922132,0.492502392237286,0.162137619091711,0.438599962275997,0.658650345873152,0,0.210289948564127,0.308713837137853,0,0,1.70630600428187,0.696710015581316,0.38660238396628,1.21010114774006,1.77902435075896,1.71203063501303,0,1.81168850196412,0.502670417600539,1.1937388322469,0.58489226135736,0.898819408654221,0,0.199141273254367,1.51734320762465,0.685491075658373,2.25415471346161,1.01825663922657,0.969762435838129,2.31448205638051,2.40298841072178,1.77132177575523,2.35498091762062,1.85095745882701,0,0.333690211432188,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0.964887042726734,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,1.12385412991454,0.820481806145422,0,0,0.94652465824877,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,1.41538265394416,0.809621403349789,0.584511715822624,1.97643888973262,0.963963949265421,0.709700426041343,0.178065603667255,0.325773918707152,0.494910368917606,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0,1.08036656418786,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0.469343416127421,0,0,0,0,0.180938774784468,0.358117032009409,0.656563598980245,0,0,0,0,0,0,0,0,0,0.139951452323658,0.414599921413271,0,1.26534397432454,0.406638934253697,0.324016022465404,0.836353184057875,0.436725127492355,0,0.330613822901344,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.897138566094757,0.167884616364078,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,1.66059756134683,0.399024873401031,1.19513524027894,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.512201219238954,0.689225627467359,0,0.927074607558844,0.38581844092741,0,0.294397840268795,0,0,0.715308569841963,0.436039249896986,0.376437521661322,0.423073039458382,0.365855945745545,0.526139422875686,0.6790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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:211949 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R5B6 | |||
|association_with_transcript=7bp_to_ENSMUST00000055433_5end | |||
|cluster_id=chr9:96919242..96919254,- | |||
|description=CAGE_peak_2_at_Spsb4_5end | |||
|id=chr9:96919242..96919254,- | |||
|ontology_enrichment_celltype=CL:0000540!4.91e-10!33;CL:0000047!4.91e-10!33;CL:0000031!4.91e-10!33;CL:0000404!4.91e-10!33;CL:0002319!1.24e-09!43;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0000117!2.11e-08!23;CL:0000337!2.11e-08!23;CL:0000055!6.88e-08!50;CL:0000393!1.53e-07!39;CL:0000211!1.53e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!6.98e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,6.80e-14,43;UBERON:0007100,1.48e-08,18;UBERON:0000948,1.48e-08,18;UBERON:0005498,1.48e-08,18;UBERON:0004140,1.48e-08,18;UBERON:0009881,1.48e-08,18;UBERON:0004141,1.48e-08,18;UBERON:0003084,1.48e-08,18;UBERON:0007005,1.48e-08,18;UBERON:0004139,1.48e-08,18;UBERON:0004291,1.48e-08,18;UBERON:0000489,2.33e-08,21;UBERON:0002113,1.32e-07,14;UBERON:0003918,1.32e-07,14;UBERON:0011143,1.32e-07,14;UBERON:0005095,1.32e-07,14;UBERON:0007687,1.32e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,1.09012578190223,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0.449949858640699,0,2.8419204597844,0.299600110518405,1.92109152660777,1.14058573539325,0.540023753326763,0.420649922702764,1.14260393761521,0.883474163806454,0.979926393719632,1.72521847832825,0.919218786610021,0,0.255374676170375,0.153606533256243,1.71452174049252,0.548925861614458,0.52091337055676,1.3959149950069,1.12552522006336,0.916789486660861,1.17851434189467,0.996601765593721,1.3047961207771,0.227178579999552,0.377857800533928,0.869593466105033,0.860423876981386,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0,1.23597483867187,0,0,0.485300549842228,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0,0.299581278809645,0,0.753926112677186,0,0.511430914660661,0.62336413367868,0,0.305518091550949,0.124406970610093,0,0,2.34216797332867,2.98872735763515,0.900310649026746,0.753524089178575,1.08858398642125,1.2811372028485,2.15513966487376,0.517406741478031,0,0.756424320671277,0.879755620819744,0.876782929710299,0.278047249225598,0.696504333044333,0.411564272815887,0.995171334092466,0,0.257347907114715,0.284163499395593,2.07125772535502,2.34526059981096,1.80062061461015,2.84093682702252,1.18058539048442,1.23413690309903,2.32533944750408,1.87791380979733,1.16765342367169,1.48103864922132,0.492502392237286,0.162137619091711,0.438599962275997,0.658650345873152,0,0.210289948564127,0.308713837137853,0,0,1.70630600428187,0.696710015581316,0.38660238396628,1.21010114774006,1.77902435075896,1.71203063501303,0,1.81168850196412,0.502670417600539,1.1937388322469,0.58489226135736,0.898819408654221,0,0.199141273254367,1.51734320762465,0.685491075658373,2.25415471346161,1.01825663922657,0.969762435838129,2.31448205638051,2.40298841072178,1.77132177575523,2.35498091762062,1.85095745882701,0,0.333690211432188,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0.964887042726734,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,1.12385412991454,0.820481806145422,0,0,0.94652465824877,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,1.41538265394416,0.809621403349789,0.584511715822624,1.97643888973262,0.963963949265421,0.709700426041343,0.178065603667255,0.325773918707152,0.494910368917606,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0,1.08036656418786,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0.469343416127421,0,0,0,0,0.180938774784468,0.358117032009409,0.656563598980245,0,0,0,0,0,0,0,0,0,0.139951452323658,0.414599921413271,0,1.26534397432454,0.406638934253697,0.324016022465404,0.836353184057875,0.436725127492355,0,0.330613822901344,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.897138566094757,0.167884616364078,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,1.66059756134683,0.399024873401031,1.19513524027894,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.512201219238954,0.689225627467359,0,0.927074607558844,0.38581844092741,0,0.294397840268795,0,0,0.715308569841963,0.436039249896986,0.376437521661322,0.423073039458382,0.365855945745545,0.526139422875686,0.679020569229309,0,0.474540072496697,0.394017929502254,0.409231043169689,0,0,0,0,0.429742108096597,0.191288332068843,0.882365676478062,0 | |||
|short_description=p2@Spsb4 | |||
}} |
Revision as of 19:53, 5 August 2015
Short description: | p2@Spsb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spsb4_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENSMUST00000055433_5end |
EntrezGene: | 211949 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 6.80e-14 | 43 |
primary circulatory organ | 1.48e-08 | 18 |
heart | 1.48e-08 | 18 |
primitive heart tube | 1.48e-08 | 18 |
primary heart field | 1.48e-08 | 18 |
anterior lateral plate mesoderm | 1.48e-08 | 18 |
heart tube | 1.48e-08 | 18 |
heart primordium | 1.48e-08 | 18 |
cardiac mesoderm | 1.48e-08 | 18 |
cardiogenic plate | 1.48e-08 | 18 |
heart rudiment | 1.48e-08 | 18 |
cavitated compound organ | 2.33e-08 | 21 |
kidney | 1.32e-07 | 14 |
kidney mesenchyme | 1.32e-07 | 14 |
upper urinary tract | 1.32e-07 | 14 |
kidney rudiment | 1.32e-07 | 14 |
kidney field | 1.32e-07 | 14 |