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FFCP PHASE1:Mm9::chrX:93291397..93291416,+: Difference between revisions

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{{FFCP|EntrezGene=17698|HGNC=|UniProt=|association_with_transcript=1bp_to_ENSMUST00000149985_5end|description=CAGE_peak_3_at_Msn_5end|id=chrX:93291397..93291416,+|ontology_enrichment_celltype=CL:0000355!5.50e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,5.45e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!4.26e-16!88;UBERON:0000926!1.47e-12!193;UBERON:0004120!1.47e-12!193;UBERON:0006603!1.47e-12!193;UBERON:0004872!4.09e-12!33;UBERON:0004535!1.72e-09!23;UBERON:0001009!1.72e-09!23;UBERON:0000065!1.85e-08!41;UBERON:0001004!7.40e-08!42;UBERON:0007100!4.70e-07!18;UBERON:0000948!4.70e-07!18;UBERON:0005498!4.70e-07!18;UBERON:0004140!4.70e-07!18;UBERON:0009881!4.70e-07!18;UBERON:0004141!4.70e-07!18;UBERON:0003084!4.70e-07!18;UBERON:0007005!4.70e-07!18;UBERON:0004139!4.70e-07!18;UBERON:0004291!4.70e-07!18;UBERON:0001134!5.50e-07!9;UBERON:0002036!5.50e-07!9;UBERON:0002385!5.50e-07!9;UBERON:0000486!5.50e-07!9;UBERON:0001015!5.50e-07!9;UBERON:0004290!5.50e-07!9;UBERON:0003082!5.50e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.56e-15,87;UBERON:0000926,2.04e-15,120;UBERON:0004120,2.04e-15,120;UBERON:0006603,2.04e-15,120;UBERON:0004872,4.02e-12,33;UBERON:0004535,1.70e-09,23;UBERON:0001009,1.70e-09,23;UBERON:0000065,1.83e-08,41;UBERON:0001004,7.33e-08,42;UBERON:0001048,2.79e-07,134;UBERON:0007100,4.66e-07,18;UBERON:0000948,4.66e-07,18;UBERON:0005498,4.66e-07,18;UBERON:0004140,4.66e-07,18;UBERON:0009881,4.66e-07,18;UBERON:0004141,4.66e-07,18;UBERON:0003084,4.66e-07,18;UBERON:0007005,4.66e-07,18;UBERON:0004139,4.66e-07,18;UBERON:0004291,4.66e-07,18;UBERON:0001134,5.45e-07,9;UBERON:0002036,5.45e-07,9;UBERON:0002385,5.45e-07,9;UBERON:0000486,5.45e-07,9;UBERON:0007503,5.45e-07,9;UBERON:0001015,5.45e-07,9;UBERON:0002329,5.45e-07,9;UBERON:0003082,5.45e-07,9;UBERON:0003059,5.45e-07,9;UBERON:0007282,5.45e-07,9;UBERON:0004290,5.45e-07,9;UBERON:0009618,5.45e-07,9|phase1_expression=2.5623815536767,0,0,0,0,0,0,7.87652272993615,8.72890077340334,12.6394844213876,7.36237263369671,5.2649624936922,8.73123722649149,7.86783621770977,3.66420737997229,5.87178275430495,4.89693314689703,13.0916798623669,14.3970155286026,9.76096199135469,3.57181818634493,8.04256704727171,7.05239430675126,1.91990907352088,1.60586496747019,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,6.98533740805594,8.61090702618398,31.6963362030877,0,0,0,43.1087579659015,32.0347491254758,31.9349483824017,40.58797267414,34.8353197328807,30.1016418879315,17.3737608806297,19.7685015878053,17.0698479510364,3.9119567217402,11.9913836009246,13.4008571468028,15.3599620268684,12.3188051030319,10.062679505548,10.4025215755797,7.97898356212479,9.07453257684653,20.8380143189117,18.3381401560804,12.8918023069361,1.41621522601718,1.05798195854407,1.26766280701236,10.165335962074,5.33576877666684,3.5995988691256,4.94433181283487,7.104801149461,4.49400165777607,4.99483796918021,2.59224030771194,2.70011876663381,2.10324961351382,2.85650984403804,1.10434270475807,3.1847607795888,3.25874601462004,3.67687514644008,2.20231761998777,1.40456071893706,0.921639199537461,0.791317726381163,1.73826522844578,2.08365348222704,1.67509799400829,2.8138130501584,1.22238598221448,3.53554302568401,3.84403538157578,2.60959224155421,22.642131806622,29.3217653214328,9.27566363845369,4.30211938490693,0,0,0,0,3.37066608316204,20.792499354523,13.5088722393492,10.6001872353102,2.25349471642689,1.28326477414318,5.09610479413291,7.11066703153331,10.3915699685383,11.4011939463794,5.56076889516262,2.51204535381932,18.6435276225964,7.57054909230606,6.59244241711316,7.61163695780353,6.6878494204257,6.0289056221049,7.17291113527799,6.6603293404728,3.46072954828123,14.3153363350713,8.84610551949874,9.86777784679196,8.83366073841574,13.5765070877862,1.86391761218122,1.46390398505774,2.09446706813455,2.55457055208591,13.7787393181808,7.19883277192089,11.9446013448681,0.898743836428936,1.83000241127451,1.7591609295801,2.25971616249959,0.255715457330331,0.62336413367868,0.486723789203273,10.1839363850316,7.46441823660558,1.26361379216837,1.26265113531884,4.81445638962004,3.21862946206862,3.78130472591233,3.61691562805716,5.98721192531685,7.04625461566674,4.68508622798644,5.43277078551933,5.17363183038821,4.72765200419548,11.0849208223288,7.67185063496512,8.61946472599353,7.66154766348766,9.67176041117334,3.58261680273288,10.5331978096985,6.69104558498259,9.09323198065896,8.28503090142008,10.5536726991493,9.7233513188948,11.3637473080901,10.6252685143598,9.41029388613007,8.8362899005155,8.58474884478781,12.9609530027558,11.0255099442032,9.19337798842933,8.02581214503972,9.5029991826466,9.22110484222413,8.58921080066379,1.68231958851302,3.08713837137853,0,0.528901133327089,5.75878276445132,3.71578674976702,4.63922860759536,4.63872106633688,4.00280478920767,2.47293313946327,1.89811624617805,4.44687177754829,2.5133520880027,3.58121649674071,4.28920991662064,2.69645822596266,2.37751854862164,2.58883655230677,3.03468641524931,7.19765629441292,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:17698
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=1bp_to_ENSMUST00000149985_5end
|cluster_id=chrX:93291397..93291416,+
|description=CAGE_peak_3_at_Msn_5end
|id=chrX:93291397..93291416,+
|ontology_enrichment_celltype=CL:0000355!5.50e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000355,5.45e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003081!4.26e-16!88;UBERON:0000926!1.47e-12!193;UBERON:0004120!1.47e-12!193;UBERON:0006603!1.47e-12!193;UBERON:0004872!4.09e-12!33;UBERON:0004535!1.72e-09!23;UBERON:0001009!1.72e-09!23;UBERON:0000065!1.85e-08!41;UBERON:0001004!7.40e-08!42;UBERON:0007100!4.70e-07!18;UBERON:0000948!4.70e-07!18;UBERON:0005498!4.70e-07!18;UBERON:0004140!4.70e-07!18;UBERON:0009881!4.70e-07!18;UBERON:0004141!4.70e-07!18;UBERON:0003084!4.70e-07!18;UBERON:0007005!4.70e-07!18;UBERON:0004139!4.70e-07!18;UBERON:0004291!4.70e-07!18;UBERON:0001134!5.50e-07!9;UBERON:0002036!5.50e-07!9;UBERON:0002385!5.50e-07!9;UBERON:0000486!5.50e-07!9;UBERON:0001015!5.50e-07!9;UBERON:0004290!5.50e-07!9;UBERON:0003082!5.50e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.56e-15,87;UBERON:0000926,2.04e-15,120;UBERON:0004120,2.04e-15,120;UBERON:0006603,2.04e-15,120;UBERON:0004872,4.02e-12,33;UBERON:0004535,1.70e-09,23;UBERON:0001009,1.70e-09,23;UBERON:0000065,1.83e-08,41;UBERON:0001004,7.33e-08,42;UBERON:0001048,2.79e-07,134;UBERON:0007100,4.66e-07,18;UBERON:0000948,4.66e-07,18;UBERON:0005498,4.66e-07,18;UBERON:0004140,4.66e-07,18;UBERON:0009881,4.66e-07,18;UBERON:0004141,4.66e-07,18;UBERON:0003084,4.66e-07,18;UBERON:0007005,4.66e-07,18;UBERON:0004139,4.66e-07,18;UBERON:0004291,4.66e-07,18;UBERON:0001134,5.45e-07,9;UBERON:0002036,5.45e-07,9;UBERON:0002385,5.45e-07,9;UBERON:0000486,5.45e-07,9;UBERON:0007503,5.45e-07,9;UBERON:0001015,5.45e-07,9;UBERON:0002329,5.45e-07,9;UBERON:0003082,5.45e-07,9;UBERON:0003059,5.45e-07,9;UBERON:0007282,5.45e-07,9;UBERON:0004290,5.45e-07,9;UBERON:0009618,5.45e-07,9
|phase1_expression=2.5623815536767,0,0,0,0,0,0,7.87652272993615,8.72890077340334,12.6394844213876,7.36237263369671,5.2649624936922,8.73123722649149,7.86783621770977,3.66420737997229,5.87178275430495,4.89693314689703,13.0916798623669,14.3970155286026,9.76096199135469,3.57181818634493,8.04256704727171,7.05239430675126,1.91990907352088,1.60586496747019,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,6.98533740805594,8.61090702618398,31.6963362030877,0,0,0,43.1087579659015,32.0347491254758,31.9349483824017,40.58797267414,34.8353197328807,30.1016418879315,17.3737608806297,19.7685015878053,17.0698479510364,3.9119567217402,11.9913836009246,13.4008571468028,15.3599620268684,12.3188051030319,10.062679505548,10.4025215755797,7.97898356212479,9.07453257684653,20.8380143189117,18.3381401560804,12.8918023069361,1.41621522601718,1.05798195854407,1.26766280701236,10.165335962074,5.33576877666684,3.5995988691256,4.94433181283487,7.104801149461,4.49400165777607,4.99483796918021,2.59224030771194,2.70011876663381,2.10324961351382,2.85650984403804,1.10434270475807,3.1847607795888,3.25874601462004,3.67687514644008,2.20231761998777,1.40456071893706,0.921639199537461,0.791317726381163,1.73826522844578,2.08365348222704,1.67509799400829,2.8138130501584,1.22238598221448,3.53554302568401,3.84403538157578,2.60959224155421,22.642131806622,29.3217653214328,9.27566363845369,4.30211938490693,0,0,0,0,3.37066608316204,20.792499354523,13.5088722393492,10.6001872353102,2.25349471642689,1.28326477414318,5.09610479413291,7.11066703153331,10.3915699685383,11.4011939463794,5.56076889516262,2.51204535381932,18.6435276225964,7.57054909230606,6.59244241711316,7.61163695780353,6.6878494204257,6.0289056221049,7.17291113527799,6.6603293404728,3.46072954828123,14.3153363350713,8.84610551949874,9.86777784679196,8.83366073841574,13.5765070877862,1.86391761218122,1.46390398505774,2.09446706813455,2.55457055208591,13.7787393181808,7.19883277192089,11.9446013448681,0.898743836428936,1.83000241127451,1.7591609295801,2.25971616249959,0.255715457330331,0.62336413367868,0.486723789203273,10.1839363850316,7.46441823660558,1.26361379216837,1.26265113531884,4.81445638962004,3.21862946206862,3.78130472591233,3.61691562805716,5.98721192531685,7.04625461566674,4.68508622798644,5.43277078551933,5.17363183038821,4.72765200419548,11.0849208223288,7.67185063496512,8.61946472599353,7.66154766348766,9.67176041117334,3.58261680273288,10.5331978096985,6.69104558498259,9.09323198065896,8.28503090142008,10.5536726991493,9.7233513188948,11.3637473080901,10.6252685143598,9.41029388613007,8.8362899005155,8.58474884478781,12.9609530027558,11.0255099442032,9.19337798842933,8.02581214503972,9.5029991826466,9.22110484222413,8.58921080066379,1.68231958851302,3.08713837137853,0,0.528901133327089,5.75878276445132,3.71578674976702,4.63922860759536,4.63872106633688,4.00280478920767,2.47293313946327,1.89811624617805,4.44687177754829,2.5133520880027,3.58121649674071,4.28920991662064,2.69645822596266,2.37751854862164,2.58883655230677,3.03468641524931,7.19765629441292,4.50830942692322,6.10953983535943,6.40043207653165,7.5746685481544,8.66340558602325,6.6424566590821,5.02395929092399,6.66344685177723,0.592905254174298,6.50695912292767,6.4864468387357,5.62155280962134,5.47722327748958,5.788251834058,3.05551022137704,4.02774592431135,5.83686816390127,3.56929837144506,8.62609239164127,5.20997326735905,3.12037673114561,2.02063102357689,1.97337154874103,2.8946611281802,17.3667998756608,3.97931964718018,8.47417877498535,8.65699937453459,8.68353918667458,9.38035041674168,9.28370199455454,12.8788207586147,18.128041572212,18.6030339304971,18.4967531642685,16.7140581010053,18.3046080777849,20.1062191428301,7.53956419696361,17.9488875660174,2.95058563811422,2.75936746304733,1.76605648986571,2.22702204525186,14.9180800292775,4.54447668967871,6.31016438832513,5.85658116444958,4.73931475012158,5.4962823529087,8.46634961513098,6.79383673893198,4.45291771842384,4.38383786866968,1.97643888973262,0.963963949265421,7.66476460124651,8.01295216502649,9.77321756121457,8.08353602565424,1.32745138339963,2.6705869977048,2.72091201268276,3.96070667487386,3.83892460745005,6.14870295887855,4.9101375701962,2.90826983582004,5.34746067577082,1.8962205476149,3.16255825724996,2.06271086496374,1.70219802876894,4.86164953884538,4.2688365648309,3.85806663056866,4.78818630834139,4.10248280484762,4.60737257685939,3.65357938937519,11.0295702789944,10.591603543191,2.42581237860458,5.93590510589328,11.4639742954093,10.434136012571,9.19167048824151,9.68431308495861,2.04036585640896,5.37733375830478,7.34744787430767,11.144890870014,11.4820606969221,8.66494902221579,10.2520670790769,7.77845788902177,16.3179292794101,12.8755336137765,11.3323978519628,2.86401185404534,3.00519193902079,3.65975040828328,5.61627772273367,6.06356058441959,6.33251434863915,5.66430254816247,7.60411792673091,4.18809507174447,2.98114438571124,1.86401793926078,0.56369293868419,4.63501292736334,3.80554528051325,7.00024278038572,8.91202781996345,8.10989402355735,7.86293498926552,6.11960608766566,3.25063967719704,1.20792060413003,1.72818003754719,10.7443781013581,6.28448167399509,7.60061083019722,8.05509102462329,6.62398773969681,5.16571522431289,10.3368086587173,9.45212973917294,9.79374564497032,11.812055031525,10.4859232542314,9.94070383545475,8.37043022270866,8.06450625052826,3.62768613784338,5.54964883435162,4.84454825691169,7.55480773638353,5.02292944483695,10.5102186252662,7.69236821922513,6.21668299329291,3.00943262421218,0.564751842617067,1.38097570952153,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,0,1.03552062350364,3.52876981786201,6.78342284781753,3.75613932659095,4.132814190161,4.19226325255965,3.49302666055027,4.22268782823069,5.35691148821125,7.06022261101994,4.29585259998456,6.33698249725599,5.09291121742406,4.40115085108447,6.21043978327232,6.43277252302869,3.81034953026459,5.56244764535306,5.01563973205633,5.35711671044299,6.03515572551029,6.17164654293748,3.72699192934609,5.48403236878838,6.1045494985578,5.17601592284318,5.92302255241735,6.0366231048015,4.99832451731901,5.29636043998861,6.17256498823512,5.10130577933949,5.31924204828043,4.50154147486658,6.19747364743864,6.75173138433995,5.9954538705107,7.71974307869848,7.52048689169044,9.56441660344217,6.83833399270498,7.88350641109433
|short_description=p3@Msn
}}

Revision as of 11:00, 6 August 2015

Short description:p3@Msn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Msn_5end
Coexpression cluster:NA
Association with transcript: 1bp_to_ENSMUST00000149985_5end
EntrezGene:17698
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Msn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H331.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G940.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H234.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.77
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.07
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D922.64
Mouse Schwann, donor2.CNhs12573.11746-123F929.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H918.64
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.66
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H114.32
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F59.87
bone (os femoris), neonate N16.CNhs11225.1525-43A68.83
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.94
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.46
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E211.08
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.69
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C810.63
heart, embryo E16.CNhs11021.457-17C69.41
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E312.96
heart, neonate N03.CNhs11221.1349-25I211.03
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G18.03
heart, neonate N20.CNhs11127.821-26I69.50
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D28.59
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G77.57
kidney, neonate N10.CNhs11206.758-6D58.66
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B68.68
lung, embryo E17.CNhs10605.480-44A69.38
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C612.88
lung, neonate N06.CNhs11212.683-20E518.13
lung, neonate N07.CNhs11111.715-19A318.60
lung, neonate N10.CNhs11219.750-23E618.50
lung, neonate N20.CNhs11109.822-18A416.71
lung, neonate N25.CNhs11119.1359-25C718.30
lung, neonate N30.CNhs11133.1394-42H220.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G310.59
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G411.46
skin, neonate N03.CNhs11215.662-22H310.43
skin, neonate N06.CNhs11097.693-20I59.19
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C111.14
spleen, embryo E18.CNhs11011.1271-21F211.48
spleen, neonate N10.CNhs11116.752-24D18.66
spleen, neonate N20.CNhs11112.824-19H110.25
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.33
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I58.91
testis, embryo E18.CNhs11027.503-18G58.11
testis, neonate N00.CNhs11189.1300-22B77.86
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I27.60
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F810.34
thymus, neonate N03.CNhs11137.2104-43C79.45
thymus, neonate N06.CNhs11197.681-26C49.79
thymus, neonate N07.CNhs11211.713-19D311.81
thymus, neonate N10.CNhs11194.748-24E410.49
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G78.37
thymus, neonate N30.CNhs11132.1393-42G28.06
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.55
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F510.51
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
multi-potent skeletal muscle stem cell5.45e-079

Uber anatomy
Ontology termp-valuen
lateral plate mesoderm1.56e-1587
mesoderm2.04e-15120
mesoderm-derived structure2.04e-15120
presumptive mesoderm2.04e-15120
splanchnic layer of lateral plate mesoderm4.02e-1233
cardiovascular system1.70e-0923
circulatory system1.70e-0923
respiratory tract1.83e-0841
respiratory system7.33e-0842
primordium2.79e-07134
primary circulatory organ4.66e-0718
heart4.66e-0718
primitive heart tube4.66e-0718
primary heart field4.66e-0718
anterior lateral plate mesoderm4.66e-0718
heart tube4.66e-0718
heart primordium4.66e-0718
cardiac mesoderm4.66e-0718
cardiogenic plate4.66e-0718
heart rudiment4.66e-0718
skeletal muscle tissue5.45e-079
striated muscle tissue5.45e-079
muscle tissue5.45e-079
multilaminar epithelium5.45e-079
epithelial vesicle5.45e-079
musculature5.45e-079
somite5.45e-079
myotome5.45e-079
presomitic mesoderm5.45e-079
presumptive segmental plate5.45e-079
dermomyotome5.45e-079
trunk paraxial mesoderm5.45e-079
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