FFCP PHASE1:Hg19::chr12:52401484..52401505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=692159 | |EntrezGene=entrezgene:692159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=32680 | |HGNC=HGNC:32680 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_BC028005_5end | |association_with_transcript=-45bp_to_BC028005_5end | ||
|cluster_id=chr12:52401484..52401505,- | |||
|coexpression_cluster_id=C325 | |coexpression_cluster_id=C325 | ||
|description=CAGE_peak_1_at_GRASPOS_5end | |description=CAGE_peak_1_at_GRASPOS_5end |
Revision as of 09:25, 24 July 2015
Short description: | p1@GRASPOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRASPOS_5end |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | -45bp_to_BC028005_5end |
EntrezGene: | 692159 |
HGNC: | 32680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GRASPOS |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.53e-50 | 136 |
nongranular leukocyte | 4.08e-40 | 115 |
hematopoietic stem cell | 4.85e-39 | 168 |
intermediate monocyte | 2.60e-38 | 9 |
CD14-positive, CD16-positive monocyte | 2.60e-38 | 9 |
hematopoietic lineage restricted progenitor cell | 2.67e-38 | 120 |
hematopoietic cell | 1.25e-36 | 177 |
hematopoietic oligopotent progenitor cell | 1.68e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-32 | 161 |
classical monocyte | 3.59e-32 | 42 |
Showing 1 to 10 of 47 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-23 | 98 |
blood island | 1.85e-23 | 98 |
bone marrow | 7.16e-22 | 76 |
hemolymphoid system | 9.72e-21 | 108 |
bone element | 6.56e-20 | 82 |
skeletal element | 1.07e-17 | 90 |
immune system | 5.74e-17 | 93 |
skeletal system | 1.97e-15 | 100 |
connective tissue | 6.37e-13 | 371 |
lateral plate mesoderm | 2.68e-08 | 203 |
Showing 1 to 10 of 11 entries